Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_G06
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0030 - 9834515-9834608,9834784-9835277                           29   5.0  
03_06_0523 + 34499533-34499705,34499808-34499917,34500037-345002...    28   8.8  

>10_06_0030 - 9834515-9834608,9834784-9835277
          Length = 195

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -2

Query: 711 GKVEACDGNC*WRFPL-GEPLWHLGGWCWRESHAKRRSQXQADXCLCH 571
           G+V A DG+  +   + G  +W  G W W  S    R +   D C CH
Sbjct: 124 GEVNAGDGDVDFSTDVVGIRVW--GRWSWMGSEQDGRGRLDKDGCSCH 169


>03_06_0523 +
           34499533-34499705,34499808-34499917,34500037-34500224,
           34500984-34501451
          Length = 312

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 626 RQHHPPRCHNGSPSGNRHQQFPSQA 700
           R H PP  H   PS    Q+FP +A
Sbjct: 178 RHHEPPMSHKKFPSSAGEQRFPDRA 202


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,642,590
Number of Sequences: 37544
Number of extensions: 544789
Number of successful extensions: 1260
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)