Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_G02
         (847 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical pr...   219   2e-57
Z12017-1|CAA78047.1|  458|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>Z92803-7|CAB07244.1|  445|Caenorhabditis elegans Hypothetical
           protein K01G5.5 protein.
          Length = 445

 Score =  219 bits (535), Expect = 2e-57
 Identities = 107/170 (62%), Positives = 124/170 (72%), Gaps = 1/170 (0%)
 Frame = +1

Query: 223 RKRKKNK-DGVSLGAFQTIGDFKIEPSESVKKLDTAYWPLLLKNFDRLNVRTNHYTPLPF 399
           +K K++K +G  L   Q  G F++  S    KLD + WPLLLKN+D+LNVRTNHYTP   
Sbjct: 3   KKDKRSKLEGDDLAEAQQKGSFQLPSSNETAKLDASQWPLLLKNYDKLNVRTNHYTPHVE 62

Query: 400 GNSPLKRPISDYVKSGFINVDKPSNPSSHEVVSWIKRILKVEKTGHSGTLDPKVTGCLIV 579
           G SPLKR I +Y+ SGF N+DKPSNPSSHEVVSWIKRIL+ EKTGHSGTLDPKV+GCLIV
Sbjct: 63  GVSPLKRDIKNYISSGFFNLDKPSNPSSHEVVSWIKRILRCEKTGHSGTLDPKVSGCLIV 122

Query: 580 CIDRATRLVKSQQNAGKEYVAGFQLAFSRXEYSKVTQGLXKLRGALSXXP 729
           CIDR TRL KSQQ AGKEY+  F+L     +  KV Q L KL GAL   P
Sbjct: 123 CIDRTTRLAKSQQGAGKEYICIFKLHEEVEDDRKVKQALEKLTGALFQRP 172



 Score = 34.7 bits (76), Expect = 0.084
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 644 VFNLHSAVXNIQKSHRAWXSCV-ELYPXAPLXSAVKRQLGVRTGYDS 781
           +F LH  V + +K  +A       L+   PL SAVKRQL +RT Y++
Sbjct: 144 IFKLHEEVEDDRKVKQALEKLTGALFQRPPLISAVKRQLRIRTVYEN 190


>Z12017-1|CAA78047.1|  458|Caenorhabditis elegans Hypothetical
           protein R08D7.1 protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +1

Query: 184 RRYCSPVTTHFQRRKRKKNKD 246
           ++Y SP +   +++K+KKNKD
Sbjct: 9   KKYLSPASGDIEKKKKKKNKD 29


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,606,425
Number of Sequences: 27780
Number of extensions: 415262
Number of successful extensions: 1090
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)