Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_G01
         (776 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1024 - 25449163-25449824,25451882-25452191                       29   3.1  
06_01_0087 + 695443-695655,696669-696983                               29   3.1  
09_06_0142 - 21107878-21109104                                         29   4.1  
11_03_0066 + 9529969-9530166,9530271-9530450,9530559-9531287,953...    29   5.4  
09_02_0146 + 4953007-4953297,4954105-4954341,4954592-4954669,495...    28   9.5  
01_01_0187 + 1624159-1624279,1624530-1624590,1625118-1625574           28   9.5  

>12_02_1024 - 25449163-25449824,25451882-25452191
          Length = 323

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = +2

Query: 191 GTYDDNTDYNIA---VIYSEYDITTQTVF--VSGDDSLVSPPPPAHP 316
           GT+D   D  +A   V    Y +  +T F   +G+D L  PPPPA P
Sbjct: 186 GTFDTALDAALAYDAVSRRLYGLNAKTNFPAAAGEDDLPPPPPPAKP 232


>06_01_0087 + 695443-695655,696669-696983
          Length = 175

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
 Frame = +2

Query: 278 DDSLVSPPPPAH---PDWDAVSPL 340
           DD L  PPPPA     DW+A +PL
Sbjct: 26  DDELPPPPPPASGSGEDWEATTPL 49


>09_06_0142 - 21107878-21109104
          Length = 408

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 128 IKTNITSQFGPLTCMRLTGEPGTYDDNTDYNIA 226
           I   +   FG L C+ + GEPG Y   T + +A
Sbjct: 259 INRALERHFGDLPCVEVIGEPGRYFAETAFTLA 291


>11_03_0066 +
           9529969-9530166,9530271-9530450,9530559-9531287,
           9531554-9531706,9531803-9532238,9532322-9532501,
           9532643-9532889,9533090-9533123,9533385-9533489,
           9533833-9533967,9534220-9534399,9534504-9534626
          Length = 899

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = -2

Query: 130 DVAMEVYKMRWNGK 89
           D+AMEVYK+ WNG+
Sbjct: 689 DIAMEVYKIVWNGQ 702


>09_02_0146 +
           4953007-4953297,4954105-4954341,4954592-4954669,
           4954991-4955167,4955705-4955761,4955988-4956174,
           4956910-4957055,4957213-4957395,4957860-4957970,
           4959386-4959505,4959596-4959740,4960001-4960164,
           4960816-4960902,4961062-4961390,4963426-4963507,
           4963616-4963746,4963976-4964225,4965112-4965393,
           4966780-4966986
          Length = 1087

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 430 PGEHECSGRSQVIPAEETVXDKLFFECERKEWRNGVPIGVSR 305
           P  ++C  R   I  + ++    FF    +EWRNG   G+SR
Sbjct: 200 PSSNDCLSRYPPIALQPSLGQ--FFLHVNEEWRNGYKTGLSR 239


>01_01_0187 + 1624159-1624279,1624530-1624590,1625118-1625574
          Length = 212

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 25/88 (28%), Positives = 34/88 (38%)
 Frame = +2

Query: 50  GEAVVLERKKMERLSIPSHLIDLHCYIKTNITSQFGPLTCMRLTGEPGTYDDNTDYNIAV 229
           G+  +  R    RLS P      H Y+ T       P + +     P TY     +    
Sbjct: 91  GDPCIPLRPVQPRLS-PPQPPPYHHYLYTTTA----PPSALHPMSYPATYPAPPRHQQPA 145

Query: 230 IYSEYDITTQTVFVSGDDSLVSPPPPAH 313
              +Y I      VS  D+LV+PPPP H
Sbjct: 146 AVGDYVIGHA---VSAGDALVAPPPPPH 170


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,810,073
Number of Sequences: 37544
Number of extensions: 352192
Number of successful extensions: 1176
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)