Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_F22
(851 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.090
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.36
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.48
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 29 0.84
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 28 1.5
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.9
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 1.9
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 2.6
SPBC1683.10c |pcl1||ferrous iron transporter Pcl1|Schizosaccharo... 27 3.4
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 4.5
SPAC1952.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 27 4.5
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 27 4.5
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 26 7.8
SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|ch... 26 7.8
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 26 7.8
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.090
Identities = 22/65 (33%), Positives = 29/65 (44%)
Frame = -2
Query: 217 PSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGRGTSTAP 38
PS+A PP + PVP+ S AA P+PS P P+ P P G P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPV--PAPSGAPPVPKPSVAAPP-VPAPSSGIPPVP 1182
Query: 37 RPLSG 23
+P +G
Sbjct: 1183 KPAAG 1187
Score = 27.1 bits (57), Expect = 3.4
Identities = 23/76 (30%), Positives = 28/76 (36%)
Frame = -2
Query: 259 PGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERP 80
P AA P PS APP + PVP + ++G P P+ G P E P
Sbjct: 1145 PSVAAPPVPA----PSGAPPVPKPSVAAPPVP--APSSGIPPVPKPAAGVPPVPPPSEAP 1198
Query: 79 TGCPTRGRGTSTAPRP 32
P G P P
Sbjct: 1199 P-VPKPSVGVPPVPPP 1213
Score = 26.2 bits (55), Expect = 5.9
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 7/72 (9%)
Frame = -2
Query: 217 PSIAPPPRRDGAQPDPVPQYSGAA-------GSKNRPSPSIGGPAPQSEHERPTGCPTRG 59
PS+A PP + PVP+ S AA G+ P PS+ P + P P
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP-VPKPS 1165
Query: 58 RGTSTAPRPLSG 23
P P SG
Sbjct: 1166 VAAPPVPAPSSG 1177
Score = 26.2 bits (55), Expect = 5.9
Identities = 23/74 (31%), Positives = 28/74 (37%)
Frame = -2
Query: 259 PGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERP 80
P A P G P P A+ PVP S A S + P S+ P+P H
Sbjct: 1212 PPSTAPPVPTPSAGLPPVPVPT---AKAPPVPAPSSEAPSVSTPRSSV--PSP---HSNA 1263
Query: 79 TGCPTRGRGTSTAP 38
+ PT S AP
Sbjct: 1264 SPSPTSSSMASAAP 1277
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.36
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -3
Query: 537 PRGVGQSPRPRLEHGPPRMGLPRPQLTXGDTRHAPSTKLAAPPIVGS 397
P P P+ E PP PRP + AP APPI S
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSS 170
Score = 27.9 bits (59), Expect = 1.9
Identities = 22/83 (26%), Positives = 30/83 (36%)
Frame = -2
Query: 259 PGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERP 80
P A PT P + PPR P P P + SK P PS P ++ P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSI--PPPSPASAPPIPSKAPPIPS--SLPPPAQPAAP 180
Query: 79 TGCPTRGRGTSTAPRPLSGRLQP 11
P +A P+ ++ P
Sbjct: 181 VKSPPSAPSLPSAVPPMPPKVPP 203
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -2
Query: 232 VHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCP 68
+ ++ S APP A P PQ + P PSI P+P S P+ P
Sbjct: 115 IGKSSASAAPP----SAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAP 165
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 172 PVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTR 62
P ++ G + + P + P PQSE PT P R
Sbjct: 110 PKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPR 146
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.48
Identities = 27/91 (29%), Positives = 32/91 (35%)
Frame = -2
Query: 298 RCAAAGARTEP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPS 119
R +AA P P++ +R P I P P P S AAGS P
Sbjct: 298 RVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQG 357
Query: 118 IGGPAPQSEHERPTGCPTRGRGTSTAPRPLS 26
P P P P+ GR P PLS
Sbjct: 358 RSAPPPPP----PRSAPSTGR----QPPPLS 380
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 29.1 bits (62), Expect = 0.84
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 174 SGCAPSLRGGGAIDGPVRCTCVG*AAQPGHY 266
SGC S GG ++ P RC C+ +P H+
Sbjct: 258 SGCNCSSLGGCDLNNPSRCECLDDLDEPTHF 288
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -3
Query: 300 NGALRPAQEPSHSGPVARLSPHRCTVQGHRSHHPRVETAHNLIRSP 163
NG L ++ PS++G R + H Q S + R T H I +P
Sbjct: 411 NGLLTSSRIPSYNGSKVRSTSHPSRQQYIGSSNSRFNTRHQTISTP 456
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 1.9
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Frame = -2
Query: 274 TEP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQS 95
T P P AA P + P+ PPP P P +G + P P+ P+ +
Sbjct: 1689 TPPVRPQSAAPPQM---SAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 94 EHERP-------TGCPTRGRGTSTAPRPLSGRL 17
+R TG + T+ +P++GR+
Sbjct: 1746 PGDRSALLQQIHTGTRLKKTVTTDKSKPIAGRV 1778
Score = 26.2 bits (55), Expect = 5.9
Identities = 26/76 (34%), Positives = 36/76 (47%)
Frame = -2
Query: 235 QVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGR 56
Q RTG + P+R GA P PQ + +P + GG APQ+ T G
Sbjct: 148 QPQRTGGAGFIQPQRTGAMPAYQPQMNNFM----QPQKT-GGFAPQATGFMQT--QPFGA 200
Query: 55 GTSTAPRPLSGRLQPR 8
S AP+P +G +QP+
Sbjct: 201 APSFAPQP-TGFVQPQ 215
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.9 bits (59), Expect = 1.9
Identities = 24/73 (32%), Positives = 27/73 (36%), Gaps = 9/73 (12%)
Frame = -2
Query: 277 RTEP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSP----SIGG 110
++ P P PT P P P G P P P AG P P S GG
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Query: 109 -----PAPQSEHE 86
PAPQ+E E
Sbjct: 790 SRYYAPAPQAEPE 802
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -2
Query: 220 GPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQS 95
G I PPP++ + P+P + S P P++ P+P +
Sbjct: 1005 GSQIVPPPKQPANRVVPLPPTASQRASAYEP-PTVSVPSPSA 1045
Score = 23.8 bits (49), Expect(2) = 3.2
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Frame = -3
Query: 309 PDGNGA-LRPAQEPSHSGPVARLSPHRCTVQGHR-SHHPRV--ETAHNLIRSPNIREQPA 142
P +G + P Q+PSH P ++P R S P + + I + PA
Sbjct: 938 PTASGTRVPPVQQPSHPNPYTPVAPQSPVAAASRISSSPNMPPSNPYTPIAVASSTVNPA 997
Query: 141 QRTGRPHQSGDQLRKVSTKGPPAVQHEAEVLQLHPDPYPDASNHD 7
T +PH G Q+ PP Q V+ L P AS ++
Sbjct: 998 -HTYKPH-GGSQI------VPPPKQPANRVVPLPPTASQRASAYE 1034
Score = 21.4 bits (43), Expect(2) = 3.2
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 477 LPRPQLTXGDTRHAPSTKLAAPPIVG 400
LP P T T AP+ PP VG
Sbjct: 907 LPPPPPTASMTASAPAIASPPPPKVG 932
>SPBC1683.10c |pcl1||ferrous iron transporter
Pcl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 242
Score = 27.1 bits (57), Expect = 3.4
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 373 WELEAESLAADYRWR--SELRARGVARVPXSELRARKAHSR 489
W+ E + LAA YR R E +R VA V E A +AH+R
Sbjct: 97 WDAEVDELAAIYRGRGLDEELSRTVA-VQLMEYNALEAHAR 136
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 4.5
Identities = 20/70 (28%), Positives = 24/70 (34%), Gaps = 10/70 (14%)
Frame = -2
Query: 205 PPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERPTG----------CPTRGR 56
PP P P + + G+ + P PS S PTG PT
Sbjct: 306 PPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTS 365
Query: 55 GTSTAPRPLS 26
TST P P S
Sbjct: 366 STSTPPPPAS 375
>SPAC1952.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 158
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 286 AGARTEP*WPGCAAQPTQVHRTGPS-IAPPPRRDGAQPDP 170
A A+ +PG ++Q T + P PPPR+ P P
Sbjct: 80 ASAQQHAFFPGSSSQQTDIPNVRPQPHIPPPRKSDEAPPP 119
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 26.6 bits (56), Expect = 4.5
Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Frame = -2
Query: 259 PGCAAQPTQVHRTGPSIAPP-PRRDGAQPD--PV-PQYSGAAGSKNRPSPSIGGPAPQSE 92
P +A T PS +P P P P P YS + S + SPS +P
Sbjct: 1604 PSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1663
Query: 91 HERPTGCPTRGRGTSTAP 38
P+ PT + T+P
Sbjct: 1664 PTSPSYSPTSPSYSPTSP 1681
Score = 26.2 bits (55), Expect = 5.9
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = -2
Query: 223 TGPSIAPP-PRRDGAQPD--PV-PQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGR 56
T PS +P P P P P YS + S + SPS +P P+ PT
Sbjct: 1581 TSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1640
Query: 55 GTSTAP 38
+ T+P
Sbjct: 1641 YSPTSP 1646
Score = 26.2 bits (55), Expect = 5.9
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
Frame = -2
Query: 223 TGPSIAPP-PRRDGAQPD--PV-PQYSGAAGSKNRPSPSIGGPAPQSEHERPTGCPTRGR 56
T PS +P P P P P YS + S + SPS +P P+ PT
Sbjct: 1595 TSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1654
Query: 55 GTSTAP 38
+ T+P
Sbjct: 1655 YSPTSP 1660
Score = 25.8 bits (54), Expect = 7.8
Identities = 19/74 (25%), Positives = 30/74 (40%)
Frame = -2
Query: 259 PGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERP 80
PG + P + + PS +P + P YS + S + SPS +P P
Sbjct: 1563 PGYSTSPAYMP-SSPSYSPT---SPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSP 1618
Query: 79 TGCPTRGRGTSTAP 38
+ PT + T+P
Sbjct: 1619 SYSPTSPSYSPTSP 1632
>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
Ran1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 470
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -2
Query: 274 TEP*WPGCAAQPTQVHRTGPSIAPPPRRDGAQPDPVPQYSGAAGSKNRP 128
TE WP AA VH S P P P P + G N+P
Sbjct: 397 TESFWPSAAAAAAAVHNNANSYMP------ITPTPYPNNAKIFGYPNQP 439
>SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -2
Query: 196 RRDGAQPDPVPQYSGAAGSKNRPSPSIGGPAPQSEHERP 80
RRDG P P+ G + R + P+P+ E ERP
Sbjct: 113 RRDGVSPFS-PEGEGL--ERKREHEKLQAPSPKEEEERP 148
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 582 PSHQRPXNRLDGP*PPRGVGQSPRPRLEHGPPRMGL 475
PS+Q+P N G P S P L+ PP G+
Sbjct: 206 PSNQKPPNFAPGMPAPGPTAVSASPSLQSMPPTNGV 241
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,081,416
Number of Sequences: 5004
Number of extensions: 66404
Number of successful extensions: 291
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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