Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_F21
(815 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.27
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 30 1.9
07_01_0080 + 587674-588510 30 1.9
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 1.9
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.3
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 29 4.4
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 25 4.9
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -2
Query: 403 PPKXGGGKXXXXXGPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGP 263
PP G G PPPPP G K PP PP P
Sbjct: 653 PPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPP 699
Score = 31.9 bits (69), Expect = 0.63
Identities = 20/71 (28%), Positives = 21/71 (29%), Gaps = 1/71 (1%)
Frame = -3
Query: 450 PPRGXAPPXXXXKX-GXPQXXGXGXXXXGXAPPPPXGXKKKXVCVDTXXXKKTPPXFPPG 274
PP PP + P G G PPPP K PP PP
Sbjct: 636 PPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPP 695
Query: 273 XRXPXNXTXFP 241
P N T P
Sbjct: 696 PLPPANRTNGP 706
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = -2
Query: 403 PPKXGGGKXXXXXGPPPPPXXXKKXXLCGHXNXXKNPPXXPP 278
PP G K PPPPP + + PP PP
Sbjct: 551 PPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPP 592
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 361 PPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
PPPPP K + G PP PP GPP
Sbjct: 230 PPPPPPPPKPANIAGAPGLPLPPPPPPP--PGPP 261
>07_01_0080 + 587674-588510
Length = 278
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 403 PPKXGGGKXXXXXGPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPPKF 254
PP+ GG PPPPP G PP PP PP F
Sbjct: 79 PPRLGGDGMFRRPPPPPPPPPSS-----GSPPPPPPPPPPPPPPPPPPLF 123
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/83 (28%), Positives = 26/83 (31%)
Frame = -3
Query: 522 PPPPXXXXGGXXFLX*XXRGXXDFPPRGXAPPXXXXKXGXPQXXGXGXXXXGXAPPPPXG 343
PPPP G G PP APP G P G APPPP G
Sbjct: 1112 PPPPGGITGVPPPPPIGGLGGHQAPP---APPLPEGIGGVPPPPPVGGLGGPPAPPPPAG 1168
Query: 342 XKKKXVCVDTXXXKKTPPXFPPG 274
+ + PP P G
Sbjct: 1169 FRGGTPPPNAHGGVAPPPPPPRG 1191
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/72 (27%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = -3
Query: 555 PXXXKKXXGGXPPPPXXXXGGXXFLX*XXRGXXDFPP-RGXAPPXXXXKXGXPQXXGXGX 379
P K PPPP +G PP +G PP P G
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPP--PPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Query: 378 XXXGXAPPPPXG 343
G PPPP G
Sbjct: 373 KKGGPPPPPPKG 384
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -2
Query: 361 PPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
PPPPP +PP PP GPP
Sbjct: 33 PPPPPPLEPAPPSTPQLRGEASPPPPPPPPVGPP 66
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 25.0 bits (52), Expect(2) = 4.9
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = -2
Query: 364 GPPPPPXXXKKXXLCGHXNXXKNPPXXP--PGXXGPPKF 254
GPPPPP G PP P P GPP F
Sbjct: 369 GPPPPP------GAAGRGGGGPPPPALPGGPRARGPPPF 401
Score = 22.2 bits (45), Expect(2) = 4.9
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = -2
Query: 403 PPKXGGGKXXXXXGPPPPP 347
PP GPPPPP
Sbjct: 335 PPAPSPSAAGAGSGPPPPP 353
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,597,110
Number of Sequences: 37544
Number of extensions: 531027
Number of successful extensions: 5269
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4166
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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