Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_F21
(815 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 36 0.046
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 35 0.061
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.11
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.11
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.11
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 26 2.0
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 26 2.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.0
AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen prot... 29 5.3
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 35.5 bits (78), Expect = 0.046
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 364 GPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
G PPPP + L G N + PP P G PP
Sbjct: 104 GTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPP 138
Score = 35.5 bits (78), Expect = 0.046
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 364 GPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
G PPPP + L G N + PP P G PP
Sbjct: 135 GSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPP 169
Score = 34.7 bits (76), Expect = 0.080
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 364 GPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
G PPPP + L G N + PP P G PP
Sbjct: 41 GTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPP 75
Score = 34.7 bits (76), Expect = 0.080
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 364 GPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
G PPPP + L G N + PP P G PP
Sbjct: 259 GSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPP 293
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 364 GPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
G P PP + L G N + PP P G PP
Sbjct: 228 GSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPP 262
Score = 31.5 bits (68), Expect = 0.75
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 364 GPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
G PPPP + L N + PP P G PP
Sbjct: 166 GSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPP 200
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = -2
Query: 361 PPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
PPPPP + N + PP P G PP
Sbjct: 74 PPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPP 107
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 35.1 bits (77), Expect = 0.061
Identities = 38/117 (32%), Positives = 39/117 (33%), Gaps = 3/117 (2%)
Frame = -3
Query: 528 GXPPPPXXXXGGXXFLX*XXRGXXDFPPRGXAPPXXXXKXGXPQXXGXGXXXXGXAPPPP 349
G PPPP G F G PP APP G PQ G G PPPP
Sbjct: 365 GGPPPPVSSAPGN-FAPPPQSG----PPGAFAPPPSAF--GAPQGPGG---PGGYGPPPP 414
Query: 348 XGXKKKXVCVDTXXXKK---TPPXFPPGXRXPXNXTXFPKXGAGXXKFWGXGGGSPF 187
G PP PG P T FP GA G GG+PF
Sbjct: 415 GGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPP-PTGFPPVGAPPPGAAGAPGGNPF 470
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = -2
Query: 403 PPKXGGGKXXXXXGPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
PP GG GPPPPP + G PP PPG PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISG----GPPPPPPPPGGCPPP 771
Score = 31.5 bits (68), Expect = 0.75
Identities = 22/74 (29%), Positives = 24/74 (32%)
Frame = -3
Query: 570 SAXGGPXXXKKXXGGXPPPPXXXXGGXXFLX*XXRGXXDFPPRGXAPPXXXXKXGXPQXX 391
++ GG GG PPPP L G PP G PP P
Sbjct: 698 TSAGGSSALPPITGGPPPPPG--------LPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
Query: 390 GXGXXXXGXAPPPP 349
G G PPPP
Sbjct: 750 GLPPISGGPPPPPP 763
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 409 GXPPKXGGGKXXXXXGPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
G PP G GPPPPP + G P PP GPP
Sbjct: 712 GPPPPPG--LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = -2
Query: 403 PPKXGGGKXXXXXGPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
PP GG GPPPPP + G PP PPG PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISG----GPPPPPPPPGGCPPP 771
Score = 31.5 bits (68), Expect = 0.75
Identities = 22/74 (29%), Positives = 24/74 (32%)
Frame = -3
Query: 570 SAXGGPXXXKKXXGGXPPPPXXXXGGXXFLX*XXRGXXDFPPRGXAPPXXXXKXGXPQXX 391
++ GG GG PPPP L G PP G PP P
Sbjct: 698 TSAGGSSALPPITGGPPPPPG--------LPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
Query: 390 GXGXXXXGXAPPPP 349
G G PPPP
Sbjct: 750 GLPPISGGPPPPPP 763
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 409 GXPPKXGGGKXXXXXGPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
G PP G GPPPPP + G P PP GPP
Sbjct: 712 GPPPPPG--LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 759
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = -2
Query: 403 PPKXGGGKXXXXXGPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
PP GG GPPPPP + G PP PPG PP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISG----GPPPPPPPPGGCPPP 354
Score = 31.5 bits (68), Expect = 0.75
Identities = 22/74 (29%), Positives = 24/74 (32%)
Frame = -3
Query: 570 SAXGGPXXXKKXXGGXPPPPXXXXGGXXFLX*XXRGXXDFPPRGXAPPXXXXKXGXPQXX 391
++ GG GG PPPP L G PP G PP P
Sbjct: 281 TSAGGSSALPPITGGPPPPPG--------LPPITGGPPPPPPPGGLPPITGGPPPPPPPG 332
Query: 390 GXGXXXXGXAPPPP 349
G G PPPP
Sbjct: 333 GLPPISGGPPPPPP 346
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 409 GXPPKXGGGKXXXXXGPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
G PP G GPPPPP + G P PP GPP
Sbjct: 295 GPPPPPG--LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP 342
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 26.2 bits (55), Expect(2) = 2.0
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +1
Query: 727 PXXRXXXPXPXSXXXXFXRXPPPPPP 804
P R P P + PPPPPP
Sbjct: 469 PPSRIPNPSPSPQPAEVSKSPPPPPP 494
Score = 22.2 bits (45), Expect(2) = 2.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 787 PPPPPPXA 810
PPPPPP A
Sbjct: 506 PPPPPPPA 513
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 26.2 bits (55), Expect(2) = 2.1
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +1
Query: 727 PXXRXXXPXPXSXXXXFXRXPPPPPP 804
P R P P + PPPPPP
Sbjct: 476 PPSRIPNPSPSPQPAEVSKSPPPPPP 501
Score = 22.2 bits (45), Expect(2) = 2.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 787 PPPPPPXA 810
PPPPPP A
Sbjct: 517 PPPPPPPA 524
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 403 PPKXGGGKXXXXXGPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
PP+ GG G PPPP K+ ++PP P PP
Sbjct: 314 PPQAGGSPPPAGTGSPPPPPRQKRQA------PERSPPTGSPPTGSPP 355
Score = 28.3 bits (60), Expect = 7.0
Identities = 25/96 (26%), Positives = 31/96 (32%), Gaps = 7/96 (7%)
Frame = -3
Query: 528 GXPPPPXXXXGGXXFLX*XXRGXXDFPPRGXAPPXXXXKXGXPQXXGXGXXXXGXAPP-- 355
G PPPP G PPR +PP G P G +PP
Sbjct: 270 GSPPPPPTGSPPPP-----PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 324
Query: 354 ----PPXGXKKKXVCVDTXXXKKTPP-XFPPGXRXP 262
PP ++K + +PP PP R P
Sbjct: 325 GTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 360
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 403 PPKXGGGKXXXXXGPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
PP+ GG G PPPP K+ ++PP P PP
Sbjct: 335 PPQAGGSPPPAGTGSPPPPPRQKRQA------PERSPPTGSPPTGSPP 376
Score = 28.3 bits (60), Expect = 7.0
Identities = 25/96 (26%), Positives = 31/96 (32%), Gaps = 7/96 (7%)
Frame = -3
Query: 528 GXPPPPXXXXGGXXFLX*XXRGXXDFPPRGXAPPXXXXKXGXPQXXGXGXXXXGXAPP-- 355
G PPPP G PPR +PP G P G +PP
Sbjct: 291 GSPPPPPTGSPPPP-----PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 345
Query: 354 ----PPXGXKKKXVCVDTXXXKKTPP-XFPPGXRXP 262
PP ++K + +PP PP R P
Sbjct: 346 GTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 381
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = -2
Query: 403 PPKXGGGKXXXXXGPPPPPXXXKKXXLCGHXNXXKNPPXXPPGXXGPP 260
PP+ GG G PPPP K+ ++PP P PP
Sbjct: 320 PPQAGGSPPPAGTGSPPPPPRQKRQA------PERSPPTGSPPTGSPP 361
Score = 28.3 bits (60), Expect = 7.0
Identities = 25/96 (26%), Positives = 31/96 (32%), Gaps = 7/96 (7%)
Frame = -3
Query: 528 GXPPPPXXXXGGXXFLX*XXRGXXDFPPRGXAPPXXXXKXGXPQXXGXGXXXXGXAPP-- 355
G PPPP G PPR +PP G P G +PP
Sbjct: 276 GSPPPPPTGSPPPP-----PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 330
Query: 354 ----PPXGXKKKXVCVDTXXXKKTPP-XFPPGXRXP 262
PP ++K + +PP PP R P
Sbjct: 331 GTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 366
>AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen protein
115 protein.
Length = 393
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = -2
Query: 409 GXPPKXGGGKXXXXXGPPPPPXXXKKXXLCGHXNXXKNP-PXXPPGXXG 266
G P G K GPP PP G NP P PPG G
Sbjct: 291 GSPGSYGESKEEEIAGPPGPPGVRGIQGGVGSRGAEGNPGPKGPPGLQG 339
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,337,536
Number of Sequences: 27780
Number of extensions: 305567
Number of successful extensions: 2144
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1723
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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