Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_F19
(747 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 4e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.001
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.005
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.40
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 24 1.6
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 2.8
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 2.8
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 23 3.6
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 3.8
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 5.0
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 5.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 6.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.9 bits (89), Expect = 4e-04
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Frame = -2
Query: 695 PXPPPP----PXXXXXXXXXXXXXXXXXXPXPPPPPPXXXXXGPPPPXXXXXXPXPPP 534
P PPPP P P PPPPPP GPPPP P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP------PPPPP 783
Score = 33.9 bits (74), Expect = 0.025
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -2
Query: 689 PPPPPXXXXXXXXXXXXXXXXXXPXPPPPPPXXXXXGPPPPXXXXXXPXPPPP 531
PPPPP P PPP PPPP P PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP-----PPPPGVAGAGPPPPPP 780
Score = 33.5 bits (73), Expect = 0.033
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -2
Query: 689 PPPPPXXXXXXXXXXXXXXXXXXPXPPPPPPXXXXXGPPPPXXXXXXPXPPPP 531
PPPPP P PPP P PPPP PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPI-----PVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 29.9 bits (64), Expect = 0.40
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -2
Query: 695 PXPPPPPXXXXXXXXXXXXXXXXXXPXPPPPPPXXXXXG 579
P PPP P P PPPPPP G
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 695 PXPPPPPXXXXXXXXXXXXXXXXXXPXPPPPPPXXXXXG 579
P PPPPP P PPPPPP G
Sbjct: 761 PPPPPPPPGVAGAGP----------PPPPPPPPAVSAGG 789
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.3 bits (85), Expect = 0.001
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -2
Query: 695 PXPPPPPXXXXXXXXXXXXXXXXXXPXPPPPPPXXXXXGPPPPXXXXXXPXPPPP 531
P PPPP P PPPPP P P P PPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 35.1 bits (77), Expect = 0.011
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -3
Query: 697 PXXPPPPXXXXXXXXXXXXXXXXXXXPXPPPPPXXXXXXXPPPPXXXFXXPPPPP 533
P PPP P PPPP P PP PPPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 34.3 bits (75), Expect = 0.019
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -1
Query: 696 PXPPPPPXXXXXXXXXXXXXXXXXXXXXPPPPPXXXXXXXPPPPXXXFXXXPPPP 532
P PPPPP PPPPP P P PPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 30.7 bits (66), Expect = 0.23
Identities = 17/55 (30%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Frame = -2
Query: 689 PPPPPXXXXXXXXXXXXXXXXXXPXPPPPPPXXXXXG--PPPPXXXXXXPXPPPP 531
PPPPP PPPPP G PPP PP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Score = 29.1 bits (62), Expect = 0.70
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 620 PXPPPPPPXXXXXGPPPPXXXXXXPXPPPP 531
P PPPPP PP PPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPP 340
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 36.3 bits (80), Expect = 0.005
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2
Query: 620 PXPPPPPPXXXXXGPPPPXXXXXXPXPPPPXXXKKKK 510
P PPPPPP PPP PPPP KK+K
Sbjct: 9 PPPPPPPPGFEPPSQPPP--------PPPPGYVKKRK 37
Score = 35.1 bits (77), Expect = 0.011
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -2
Query: 620 PXPPPPPPXXXXXGPPPPXXXXXXPXPPPPXXXKKKKK 507
P PPPPP PPP P PPPP KK+K
Sbjct: 6 PGNPPPPP------PPPGFEPPSQPPPPPPPGYVKKRK 37
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.40
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 620 PXPPPPPPXXXXXGPPPPXXXXXXPXPPPP 531
P PPPPP PP PPPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Frame = -2
Query: 620 PXPP--PPPPXXXXXGPPPPXXXXXXPXPPPP 531
P PP PP P PPPP P P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.8 bits (49), Expect(2) = 1.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 620 PXPPPPPPXXXXXG 579
P PPPPPP G
Sbjct: 946 PPPPPPPPLVSAAG 959
Score = 22.2 bits (45), Expect(2) = 1.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 704 FXXPXPPPPP 675
F P PPPPP
Sbjct: 944 FPPPPPPPPP 953
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -2
Query: 620 PXPPPPPPXXXXXGPPPPXXXXXXPXPPP 534
P P P P PPPP P PP
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = -2
Query: 614 PPPPPPXXXXXGPPPPXXXXXXPXPPPP 531
PPPPP GPP P PP
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 23.4 bits (48), Expect(2) = 3.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 620 PXPPPPPP 597
P PPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 21.4 bits (43), Expect(2) = 3.6
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -2
Query: 548 PXPPPPXXXKKKKKXFXFFFXGGG 477
P PPPP +KK + + G
Sbjct: 1096 PPPPPPPAEVEKKDLYLALYDFAG 1119
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 3.8
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 3/55 (5%)
Frame = -2
Query: 686 PPPPXXXXXXXXXXXXXXXXXXPXPPPPPPXXXXXG---PPPPXXXXXXPXPPPP 531
PPPP PPPP G PPPP PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Score = 26.6 bits (56), Expect = 3.8
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 3/55 (5%)
Frame = -2
Query: 686 PPPPXXXXXXXXXXXXXXXXXXPXPPPPPPXXXXXG---PPPPXXXXXXPXPPPP 531
PPPP PPPP G PPPP PPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Score = 26.6 bits (56), Expect = 3.8
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 3/55 (5%)
Frame = -2
Query: 686 PPPPXXXXXXXXXXXXXXXXXXPXPPPPPPXXXXXG---PPPPXXXXXXPXPPPP 531
PPPP PPPP G PPPP PPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 288
Score = 26.6 bits (56), Expect = 3.8
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 3/55 (5%)
Frame = -2
Query: 686 PPPPXXXXXXXXXXXXXXXXXXPXPPPPPPXXXXXG---PPPPXXXXXXPXPPPP 531
PPPP PPPP G PPPP PPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Score = 26.6 bits (56), Expect = 3.8
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 3/55 (5%)
Frame = -2
Query: 686 PPPPXXXXXXXXXXXXXXXXXXPXPPPPPPXXXXXG---PPPPXXXXXXPXPPPP 531
PPPP PPPP G PPPP PPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 314
Score = 26.6 bits (56), Expect = 3.8
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 3/55 (5%)
Frame = -2
Query: 686 PPPPXXXXXXXXXXXXXXXXXXPXPPPPPPXXXXXG---PPPPXXXXXXPXPPPP 531
PPPP PPPP G PPPP PPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Score = 26.6 bits (56), Expect = 3.8
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 3/55 (5%)
Frame = -2
Query: 686 PPPPXXXXXXXXXXXXXXXXXXPXPPPPPPXXXXXG---PPPPXXXXXXPXPPPP 531
PPPP PPPP G PPPP PPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 535 GGGXGXKXXXXGGGGPXXXXXGGGGGGXG 621
GGG G GG G GGG GG G
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 25.8 bits (54), Expect = 6.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 535 GGGXGXKXXXXGGGGPXXXXXGGGGGGXG 621
GGG G GG G GGG GG G
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 5.0
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 620 PXPPPPPPXXXXXGPPPP 567
P PPPP P P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 5.0
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 535 GGGXGXKXXXXGGGGPXXXXXGGGGGGXG 621
GGG G GG G GG GG G
Sbjct: 37 GGGRGGARGGRGGRGGARGGRGGSSGGRG 65
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 614 PPPPPPXXXXXGPPPPXXXXXXPXPPPP 531
PP PPP PP P P PPP
Sbjct: 1189 PPVPPP---SEAPPVPKPSVGVPPVPPP 1213
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,531,567
Number of Sequences: 5004
Number of extensions: 30964
Number of successful extensions: 393
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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