Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_F12
         (875 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr...    42   0.001
BT001902-1|AAN71691.1|  678|Drosophila melanogaster SD21996p pro...    29   6.4  
BT001534-1|AAN71289.1|  711|Drosophila melanogaster RE08101p pro...    29   6.4  
AE014297-1998|AAN13649.2|  678|Drosophila melanogaster CG4898-PH...    29   6.4  
AE014297-1990|AAN13648.2|  711|Drosophila melanogaster CG4898-PE...    29   6.4  

>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
           protein.
          Length = 1053

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +2

Query: 302 NTSSGTPQERECSIRKSCNNVS--VTSMEDLSHEEIVTSYVLAHVAQFDCRRHHMAFTNG 475
           N  +  P   EC    +   V+   T   ++  EEI  + VLAH+A  D R   + FT+ 
Sbjct: 111 NLLNSRPTAAECYAVYASRLVTQLTTKWRNMEIEEIAVTTVLAHMANIDSRLQRVLFTSN 170

Query: 476 NTTRNKLLQEIKA 514
             TR+KL  E+KA
Sbjct: 171 VRTRSKLQAELKA 183


>BT001902-1|AAN71691.1|  678|Drosophila melanogaster SD21996p
           protein.
          Length = 678

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
 Frame = +2

Query: 209 TSEVRSGLYSHWRDVFEHVRSAAKIKHYADQNTSSGTPQ--ERECSIRKSCNNVSVT--- 373
           T    SGL S W  + E +     + +Y D+       Q  ER  ++R+S ++  V+   
Sbjct: 174 TQSESSGLSSRWCSIEEQLNLLDDLLYYCDEEAELYLAQLYERFETLRRSRSSSPVSDFW 233

Query: 374 SMEDLSHEEIVTSYVLAHVA 433
           S  D+ H++  TS   +H A
Sbjct: 234 SDSDMEHDDSSTSGTGSHTA 253


>BT001534-1|AAN71289.1|  711|Drosophila melanogaster RE08101p
           protein.
          Length = 711

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
 Frame = +2

Query: 209 TSEVRSGLYSHWRDVFEHVRSAAKIKHYADQNTSSGTPQ--ERECSIRKSCNNVSVT--- 373
           T    SGL S W  + E +     + +Y D+       Q  ER  ++R+S ++  V+   
Sbjct: 162 TQSESSGLSSRWCSIEEQLNLLDDLLYYCDEEAELYLAQLYERFETLRRSRSSSPVSDFW 221

Query: 374 SMEDLSHEEIVTSYVLAHVA 433
           S  D+ H++  TS   +H A
Sbjct: 222 SDSDMEHDDSSTSGTGSHTA 241


>AE014297-1998|AAN13649.2|  678|Drosophila melanogaster CG4898-PH,
           isoform H protein.
          Length = 678

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
 Frame = +2

Query: 209 TSEVRSGLYSHWRDVFEHVRSAAKIKHYADQNTSSGTPQ--ERECSIRKSCNNVSVT--- 373
           T    SGL S W  + E +     + +Y D+       Q  ER  ++R+S ++  V+   
Sbjct: 174 TQSESSGLSSRWCSIEEQLNLLDDLLYYCDEEAELYLAQLYERFETLRRSRSSSPVSDFW 233

Query: 374 SMEDLSHEEIVTSYVLAHVA 433
           S  D+ H++  TS   +H A
Sbjct: 234 SDSDMEHDDSSTSGTGSHTA 253


>AE014297-1990|AAN13648.2|  711|Drosophila melanogaster CG4898-PE,
           isoform E protein.
          Length = 711

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
 Frame = +2

Query: 209 TSEVRSGLYSHWRDVFEHVRSAAKIKHYADQNTSSGTPQ--ERECSIRKSCNNVSVT--- 373
           T    SGL S W  + E +     + +Y D+       Q  ER  ++R+S ++  V+   
Sbjct: 162 TQSESSGLSSRWCSIEEQLNLLDDLLYYCDEEAELYLAQLYERFETLRRSRSSSPVSDFW 221

Query: 374 SMEDLSHEEIVTSYVLAHVA 433
           S  D+ H++  TS   +H A
Sbjct: 222 SDSDMEHDDSSTSGTGSHTA 241


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,324,706
Number of Sequences: 53049
Number of extensions: 709509
Number of successful extensions: 1423
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1423
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)