Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_F09
(885 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 69 1e-11
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 38 0.014
U67066-1|AAB17271.1| 264|Drosophila melanogaster U2 snRNP auxil... 29 8.5
M95199-1|AAA28894.1| 230|Drosophila melanogaster epidermal grow... 29 8.5
AY089693-1|AAL90431.1| 234|Drosophila melanogaster RH69567p pro... 29 8.5
AY058537-1|AAL13766.1| 264|Drosophila melanogaster LD24048p pro... 29 8.5
AE014134-3141|AAZ66477.1| 234|Drosophila melanogaster CG10334-P... 29 8.5
AE014134-3140|AAN11053.2| 234|Drosophila melanogaster CG10334-P... 29 8.5
AE014134-3139|AAN11052.2| 234|Drosophila melanogaster CG10334-P... 29 8.5
AE014134-3138|AAN11051.2| 234|Drosophila melanogaster CG10334-P... 29 8.5
AE014134-3137|AAN11050.2| 234|Drosophila melanogaster CG10334-P... 29 8.5
AE014134-3136|AAG22442.2| 234|Drosophila melanogaster CG10334-P... 29 8.5
AE014134-3135|AAF53831.2| 234|Drosophila melanogaster CG10334-P... 29 8.5
AE014134-79|AAF51512.1| 264|Drosophila melanogaster CG3582-PA p... 29 8.5
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 68.5 bits (160), Expect = 1e-11
Identities = 49/157 (31%), Positives = 73/157 (46%)
Frame = +3
Query: 96 IRGYRTVSFEAACVLAGTXXXXXXXXXXXXXXXXRCDLRDRGEPRPGEGAIRARRLQSRR 275
IRG+RT+S +AA L+G DL +G+ EG + L+ +
Sbjct: 806 IRGFRTISDDAAHALSGITPI---------------DLDIKGKYLASEGYTQ---LEIKE 847
Query: 276 SVLEAWSRRLANPSAGLRTVEAVRPVLAEWANRDQGRLTFRLTQMLTGHGCFGRYLHRIA 455
+ W R G T + + P L EWA+ + + + +TQ LT HGCF YL R
Sbjct: 848 WIRGVWQTRWQESQRGRWTYKLI-PQLTEWADCEHKTVDYHMTQFLTDHGCFRGYLCRF- 905
Query: 456 RREPTMECHHCDCDEDTVEHTLAYCPAWLEQRRVLVS 566
R T +C +C +T EH L +C + E+R LV+
Sbjct: 906 RHVDTAQCLYCTDAVETAEHILLHCSRFAEERAQLVA 942
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 38.3 bits (85), Expect = 0.014
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +3
Query: 255 RRLQSRRSVLEAWSRRLANPSAGLRTVEAVRPVLAEWANRDQG-RLTFRLTQMLTGHGCF 431
R+ + ++++W R + S R P + A RD + R + +LTGHG F
Sbjct: 882 RKTRLEECLIQSWQNRWDDDSEPGRVTHRFIPYVT-LAYRDPSFGFSMRTSFLLTGHGSF 940
Query: 432 GRYLHRIARREPTMECHHCDCDEDTVEHTLAYCPAWLEQR 551
+LH A + T C D ED + H L CP + + R
Sbjct: 941 NAFLHGRALSD-TTACACGDPYEDWM-HILCACPLYADLR 978
>U67066-1|AAB17271.1| 264|Drosophila melanogaster U2 snRNP
auxiliary factor protein.
Length = 264
Score = 29.1 bits (62), Expect = 8.5
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 121 SRRRAFSPGRLPGTWRRRRSPPIMRGDVTFATGGNHVPEKERLERGGSNLG 273
+R R+ SPGR G+ R RSP G GG + ER G++ G
Sbjct: 194 ARSRSRSPGRRRGSRSRSRSPGRRGGGRGDGVGGGNYLNNERDNMRGNDRG 244
>M95199-1|AAA28894.1| 230|Drosophila melanogaster epidermal growth
factor-like proteinprotein.
Length = 230
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -3
Query: 427 HPWPVSICVNRKVRRPWSRFAHSARTGRTASTVRRPADGFAKRRDHASSTDR 272
HPW V C +R V +P S + S+ +G + P R ++T R
Sbjct: 18 HPWHVEACSSRTVPKPRSSIS-SSMSGTALPPTQAPVTSSTTMRTTTTTTPR 68
>AY089693-1|AAL90431.1| 234|Drosophila melanogaster RH69567p
protein.
Length = 234
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -3
Query: 427 HPWPVSICVNRKVRRPWSRFAHSARTGRTASTVRRPADGFAKRRDHASSTDR 272
HPW V C +R V +P S + S+ +G + P R ++T R
Sbjct: 22 HPWHVEACSSRTVPKPRSSIS-SSMSGTALPPTQAPVTSSTTMRTTTTTTPR 72
>AY058537-1|AAL13766.1| 264|Drosophila melanogaster LD24048p
protein.
Length = 264
Score = 29.1 bits (62), Expect = 8.5
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 121 SRRRAFSPGRLPGTWRRRRSPPIMRGDVTFATGGNHVPEKERLERGGSNLG 273
+R R+ SPGR G+ R RSP G GG + ER G++ G
Sbjct: 194 ARSRSRSPGRRRGSRSRSRSPGRRGGGRGDGVGGGNYLNNERDNMRGNDRG 244
>AE014134-3141|AAZ66477.1| 234|Drosophila melanogaster CG10334-PG,
isoform G protein.
Length = 234
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -3
Query: 427 HPWPVSICVNRKVRRPWSRFAHSARTGRTASTVRRPADGFAKRRDHASSTDR 272
HPW V C +R V +P S + S+ +G + P R ++T R
Sbjct: 22 HPWHVEACSSRTVPKPRSSIS-SSMSGTALPPTQAPVTSSTTMRTTTTTTPR 72
>AE014134-3140|AAN11053.2| 234|Drosophila melanogaster CG10334-PF,
isoform F protein.
Length = 234
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -3
Query: 427 HPWPVSICVNRKVRRPWSRFAHSARTGRTASTVRRPADGFAKRRDHASSTDR 272
HPW V C +R V +P S + S+ +G + P R ++T R
Sbjct: 22 HPWHVEACSSRTVPKPRSSIS-SSMSGTALPPTQAPVTSSTTMRTTTTTTPR 72
>AE014134-3139|AAN11052.2| 234|Drosophila melanogaster CG10334-PE,
isoform E protein.
Length = 234
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -3
Query: 427 HPWPVSICVNRKVRRPWSRFAHSARTGRTASTVRRPADGFAKRRDHASSTDR 272
HPW V C +R V +P S + S+ +G + P R ++T R
Sbjct: 22 HPWHVEACSSRTVPKPRSSIS-SSMSGTALPPTQAPVTSSTTMRTTTTTTPR 72
>AE014134-3138|AAN11051.2| 234|Drosophila melanogaster CG10334-PD,
isoform D protein.
Length = 234
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -3
Query: 427 HPWPVSICVNRKVRRPWSRFAHSARTGRTASTVRRPADGFAKRRDHASSTDR 272
HPW V C +R V +P S + S+ +G + P R ++T R
Sbjct: 22 HPWHVEACSSRTVPKPRSSIS-SSMSGTALPPTQAPVTSSTTMRTTTTTTPR 72
>AE014134-3137|AAN11050.2| 234|Drosophila melanogaster CG10334-PC,
isoform C protein.
Length = 234
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -3
Query: 427 HPWPVSICVNRKVRRPWSRFAHSARTGRTASTVRRPADGFAKRRDHASSTDR 272
HPW V C +R V +P S + S+ +G + P R ++T R
Sbjct: 22 HPWHVEACSSRTVPKPRSSIS-SSMSGTALPPTQAPVTSSTTMRTTTTTTPR 72
>AE014134-3136|AAG22442.2| 234|Drosophila melanogaster CG10334-PB,
isoform B protein.
Length = 234
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -3
Query: 427 HPWPVSICVNRKVRRPWSRFAHSARTGRTASTVRRPADGFAKRRDHASSTDR 272
HPW V C +R V +P S + S+ +G + P R ++T R
Sbjct: 22 HPWHVEACSSRTVPKPRSSIS-SSMSGTALPPTQAPVTSSTTMRTTTTTTPR 72
>AE014134-3135|AAF53831.2| 234|Drosophila melanogaster CG10334-PA,
isoform A protein.
Length = 234
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -3
Query: 427 HPWPVSICVNRKVRRPWSRFAHSARTGRTASTVRRPADGFAKRRDHASSTDR 272
HPW V C +R V +P S + S+ +G + P R ++T R
Sbjct: 22 HPWHVEACSSRTVPKPRSSIS-SSMSGTALPPTQAPVTSSTTMRTTTTTTPR 72
>AE014134-79|AAF51512.1| 264|Drosophila melanogaster CG3582-PA
protein.
Length = 264
Score = 29.1 bits (62), Expect = 8.5
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 121 SRRRAFSPGRLPGTWRRRRSPPIMRGDVTFATGGNHVPEKERLERGGSNLG 273
+R R+ SPGR G+ R RSP G GG + ER G++ G
Sbjct: 194 ARSRSRSPGRRRGSRSRSRSPGRRGGGRGDGVGGGNYLNNERDNMRGNDRG 244
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,319,065
Number of Sequences: 53049
Number of extensions: 678495
Number of successful extensions: 2376
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2375
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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