Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_F09
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AF039044-9|AAG24119.1|  168|Caenorhabditis elegans Hypothetical ...    29   4.4  
AC087079-12|AAK27874.2|  472|Caenorhabditis elegans Hypothetical...    29   4.4  
Z81576-2|CAB04644.1|  522|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr...    29   5.8  

>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +1

Query: 94  KSVDTAPSPSRRRAFSPGRLPGTWRRRRSP 183
           +S   + SP+ RR  SP + P   RRRRSP
Sbjct: 441 RSPSQSKSPAPRRRRSPSKSPQAPRRRRSP 470


>AF039044-9|AAG24119.1|  168|Caenorhabditis elegans Hypothetical
           protein F48G7.10 protein.
          Length = 168

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -2

Query: 587 VXEISSMRDKDTALLQP-CGAICERML 510
           + EIS  R K TAL+QP C AIC +++
Sbjct: 21  IHEISGHRFKATALVQPTCCAICSKLI 47


>AC087079-12|AAK27874.2|  472|Caenorhabditis elegans Hypothetical
           protein Y37E3.13 protein.
          Length = 472

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +3

Query: 438 YLHRIARREPTMECHHCDCDEDTVEHTLAYCPAWLEQRRVLVSHRRYLXHXQ 593
           YLH      P   C +C+ D+D V+ T   C  W +     V  R+YL   Q
Sbjct: 369 YLHTKVLEIPHDSCEYCEVDDDDVDDT---CEDWGDAETAAV--RQYLQWRQ 415


>Z81576-2|CAB04644.1|  522|Caenorhabditis elegans Hypothetical
           protein R10E8.3 protein.
          Length = 522

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 441 LHRIARREPTMECHHCDCDEDTVE 512
           LH  + R+P+ E  HCD +  T+E
Sbjct: 313 LHNFSNRKPSFETFHCDFERYTLE 336


>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical
           protein C27B7.7 protein.
          Length = 1471

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 216 RGEPRPGEGAIRARRLQSRRSVLEAWSRRLANPSAGL 326
           RG+PRP      + R  + +  ++ WSR  A  SAG+
Sbjct: 470 RGKPRPSISVAISDRKNASQVEVDVWSRLQATSSAGI 506


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,168,904
Number of Sequences: 27780
Number of extensions: 306014
Number of successful extensions: 1006
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)