Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_F03
         (851 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0114 - 886404-887111                                             31   1.5  
08_01_0004 + 39265-39440,39545-39652,41955-43528,43650-43996,440...    30   2.0  
05_07_0146 + 28018236-28018580,28018670-28018777,28018984-280191...    30   2.7  
03_06_0158 + 32052426-32052529,32052645-32052702,32052847-320529...    28   8.2  

>11_01_0114 - 886404-887111
          Length = 235

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
 Frame = +1

Query: 355 TPSSSTNGTETLVPEDNLYALMPPFETFLNVD----KTARLRHFFDNVKTGELIIGAVIN 522
           T +++ NG+ +++P   + A  PPF T  + D    +  R R          L++  V+ 
Sbjct: 5   TAAAAGNGSGSILPTHTIAATAPPFRTHKDADLESRRRRRRRRCLCCCLLVTLVVLLVLA 64

Query: 523 RTASGMMLKVLCTAGPTSRYVA 588
            T   + L VL    PT+R V+
Sbjct: 65  ITLLVLFLTVLRVRDPTTRLVS 86


>08_01_0004 +
           39265-39440,39545-39652,41955-43528,43650-43996,
           44090-44322,45308-45412,45531-45705,46443-46658
          Length = 977

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 17/89 (19%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
 Frame = +1

Query: 469 HFFDNVKTGELIIGAVINRTASGMMLKVLCTAGPTSRY-VADINVKAFL--PVGNIIQAV 639
           H F  + + E+++  +         ++V   A   + + + D++   +L  PV   +  +
Sbjct: 635 HSFQKLCSAEMLLTEMFRVVGDAYQVQVSADAHLAAGHPITDLDTFIYLATPVIGHVPCM 694

Query: 640 DKKNVSRNYLMNDTVCCEVIXVIQIQTKW 726
              N S++ L+ND++C + +  I +++ W
Sbjct: 695 KGSNCSKDQLVNDSICQQNLSNISLRSIW 723


>05_07_0146 +
           28018236-28018580,28018670-28018777,28018984-28019148,
           28019269-28019736,28019823-28019936,28020038-28020715
          Length = 625

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/43 (39%), Positives = 28/43 (65%)
 Frame = -1

Query: 434 VSNGGINAYKLSSGTRVSVPLVDDEGVSSSKEESNKAPASLAM 306
           ++ G +   + +SG+  S+  VDD GVSS+ EE  +A A+LA+
Sbjct: 114 INMGLLVGRRRNSGSEESI--VDDGGVSSNDEEHREAKAALAV 154


>03_06_0158 +
           32052426-32052529,32052645-32052702,32052847-32052983,
           32053824-32053899,32053965-32054017,32054415-32054896,
           32055097-32055184,32055482-32055665,32056443-32056640,
           32057351-32057534,32057982-32058109,32058236-32058317,
           32058444-32058496,32058625-32058700,32059253-32059314
          Length = 654

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = +1

Query: 214 GVGALDFAVYQSRHKHLTFQDRSKRLKLHQFIAKEAGALFDSSLLEDTPSSSTNGTETLV 393
           GVG  D+ ++   + ++ FQ+ S  +  H   A +A  L DS  L +  +  T G +   
Sbjct: 593 GVGPWDYPIFSDLYPNVMFQEPSGLIYGHVVEADQA-FLPDSHELANADNQFTGGNDDSA 651

Query: 394 PED 402
           P D
Sbjct: 652 PFD 654


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,704,101
Number of Sequences: 37544
Number of extensions: 397950
Number of successful extensions: 818
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)