Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_F02
(950 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 44 5e-06
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 44 7e-06
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 43 1e-05
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 43 2e-05
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 43 2e-05
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 42 3e-05
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 41 5e-05
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 40 8e-05
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 38 3e-04
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 37 8e-04
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 37 8e-04
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 37 0.001
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 44.4 bits (100), Expect = 5e-06
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Frame = +3
Query: 108 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKR 266
+ D LL+ Y+R P S ++V L L L N+++ T I L+ W D +
Sbjct: 39 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIW--LEHEWQDHK 96
Query: 267 LSWNAGEWGCSTWL-VSSERLWRPDVVLLN 353
W+ E+G T L V SE +W PD+VL N
Sbjct: 97 FKWDPAEYGGVTELYVPSEHIWLPDIVLYN 126
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 44.0 bits (99), Expect = 7e-06
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +3
Query: 120 LLATYD---RESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 290
LL YD R S + V + + H I E +ST+ + ++ +W D +L+WN +
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 291 G-CSTWLVSSERLWRPDVVLLN 353
G + +WRPDVVL N
Sbjct: 106 GNLNVVRWDPTIVWRPDVVLYN 127
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 43.2 bits (97), Expect = 1e-05
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Frame = +3
Query: 108 MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKR 266
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 27 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 84
Query: 267 LSWNAGEWG-CSTWLVSSERLWRPDVVLLN 353
L WN ++G T V SE +W PD+VL N
Sbjct: 85 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYN 114
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 42.7 bits (96), Expect = 2e-05
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Frame = +3
Query: 45 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESES 218
+LL+ + A N + L D LL+ Y++ P ++ V+ + + L+ + + +
Sbjct: 11 WLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNL 69
Query: 219 TVRILAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 353
+I+ ++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 70 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVLYN 118
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 42.7 bits (96), Expect = 2e-05
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Frame = +3
Query: 45 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESES 218
+LL+ + A N + L D LL+ Y++ P ++ V+ + + L+ + + +
Sbjct: 11 WLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNL 69
Query: 219 TVRILAD---LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 353
+I+ ++ +W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 70 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVLYN 118
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 41.9 bits (94), Expect = 3e-05
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Frame = +3
Query: 66 ASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTV 224
A + C + D LL+ Y++ P + LT+ ++ N++ T
Sbjct: 13 AVVSVCGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTT 72
Query: 225 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 353
+ ++ W D +L W E+G L V S+ +WRPD+VL N
Sbjct: 73 NLW--VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYN 114
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 41.1 bits (92), Expect = 5e-05
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +3
Query: 108 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 272
++++LLATY+ P + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 273 WNAGEWGCSTWL-VSSERLWRPDVVLLN 353
WN E+G L ++ +LW+PDV++ N
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYN 114
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 40.3 bits (90), Expect = 8e-05
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +3
Query: 108 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 272
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVSLRNQVMTTNLWVKQKWFDYKLR 92
Query: 273 WNAGEWGCSTWL-VSSERLWRPDVVLLN 353
W+ E+G L V SE++W PD+VL N
Sbjct: 93 WDPEEYGGVEMLYVPSEQIWLPDIVLYN 120
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 38.3 bits (85), Expect = 3e-04
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +3
Query: 108 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 272
++++LLATY+ P + V L L+ ++ E + L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLR 86
Query: 273 WNAGEWGCSTWL-VSSERLWRPDVVLLN 353
WN E+G L ++ +LW+PDV++ N
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYN 114
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 37.1 bits (82), Expect = 8e-04
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 353
L++ W D + WN+ E+G L + RLW+PDV++ N
Sbjct: 59 LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWKPDVLMYN 97
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 37.1 bits (82), Expect = 8e-04
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 353
L++ W D L WN E+G L + R+W+PDV++ N
Sbjct: 91 LKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKPDVLMYN 129
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 36.7 bits (81), Expect = 0.001
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 353
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+VL N
Sbjct: 65 NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN 117
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,472
Number of Sequences: 2352
Number of extensions: 11712
Number of successful extensions: 41
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104189652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -