Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_E15
(876 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 38 2e-04
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 37 3e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 4e-04
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 36 4e-04
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 35 9e-04
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 35 0.001
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 34 0.001
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 34 0.001
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 33 0.003
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 33 0.003
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 33 0.005
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 33 0.005
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 32 0.006
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 32 0.006
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 32 0.006
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.011
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.014
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 31 0.018
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.024
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.032
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.032
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 28 0.13
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.69
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 0.92
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 4.9
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 4.9
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 37.5 bits (83), Expect = 2e-04
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAATTAGDYALRXR----VSNNGSVSWIKRLDISTPISMQLDXWPNDM 519
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 520 QTRTFKF 540
QT KF
Sbjct: 163 QTCIMKF 169
Score = 25.8 bits (54), Expect = 0.52
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 338
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 36.7 bits (81), Expect = 3e-04
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLL-NAAATTAGDYALRXRVSNNGSVSWIKRLDISTPISMQLDXWPNDM 519
V S+ +WRPD+VL NA A + + + G V W + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 520 QTRTFKF 540
QT KF
Sbjct: 165 QTCVLKF 171
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 322 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 230
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 114 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 278
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 279 MNWIDKRLSWNA 314
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 36.3 bits (80), Expect = 4e-04
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLL-NAAATTAGDYALRXRVSNNGSVSWIKRLDISTPISMQLDXWPNDM 519
V S+ +WRPD+VL NA A + ++ G V W + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 520 QTRTFKF 540
QT KF
Sbjct: 161 QTCVMKF 167
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 35.1 bits (77), Expect = 9e-04
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 319 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYALRXRVSN-NGSVSWIKRLDISTPISM 492
E+G T L V SE +W PD+VL N A G + + + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 493 QLDXWPNDMQTRTFKF 540
+ +P D QT KF
Sbjct: 148 DVRYFPFDQQTCFMKF 163
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 34.7 bits (76), Expect = 0.001
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAATTAGDYAL----RXRVSNNGSVSWIKRLDISTPISMQLDXWP 510
V S+ +WRPD+VL N A G+Y + + V +G V W + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 511 NDMQTRTFK 537
D+QT K
Sbjct: 162 YDVQTCVLK 170
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 322 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 230
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 287
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 288 IDKRLSWNAG 317
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRXRVSNNGSVSWIKRLDISTPISMQLDXWPNDM 519
+ RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 520 QTRTFKF 540
Q KF
Sbjct: 160 QRCEMKF 166
Score = 22.2 bits (45), Expect = 6.5
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = +3
Query: 93 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 257
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 258 RIQADLQMNWIDKRLSWNAGGVG 326
L++ W D + WN G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 33.5 bits (73), Expect = 0.003
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAATTAGDYAL---RXRVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 522
ER+WRPD N + + R+S +G + + RL I M+L +P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 523 T 525
+
Sbjct: 175 S 175
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 33.1 bits (72), Expect = 0.003
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +1
Query: 325 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RXRVSNNGSVSWIKRLDISTPISM 492
G V SE +W PD+VL N A G+Y + + + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 493 QLDXWPNDMQTRTFKF 540
++ +P D Q+ KF
Sbjct: 161 NVEYFPFDEQSCIMKF 176
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 32.7 bits (71), Expect = 0.005
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRXRVSNNGSVSWIKRLDISTPISMQLDXWPNDM 519
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 520 QTRTFKF 540
Q KF
Sbjct: 191 QHCDMKF 197
Score = 25.4 bits (53), Expect = 0.69
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 32.7 bits (71), Expect = 0.005
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRXRVSNNGSVSWIKRLDISTPISMQLDXWPNDM 519
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 520 QTRTFKF 540
Q KF
Sbjct: 191 QHCDMKF 197
Score = 25.4 bits (53), Expect = 0.69
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 32.3 bits (70), Expect = 0.006
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRXRVSNNGSVSWIKRLDISTPISMQLDXWPNDM 519
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 520 QTRTFKF 540
Q KF
Sbjct: 123 QHCDMKF 129
Score = 25.4 bits (53), Expect = 0.69
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 32.3 bits (70), Expect = 0.006
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +1
Query: 325 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RXRVSNNGSVSWIKRLDISTPISM 492
G T V SE +W PD+VL N A G+Y + + + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 493 QLDXWPNDMQTRTFKF 540
++ +P D QT KF
Sbjct: 148 DVEYFPFDEQTCFMKF 163
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 32.3 bits (70), Expect = 0.006
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAATTAGDYALRXR--VSNNGSVSWIKRLDISTPISMQLDXWPND 516
V R+WRPD +L N A + VS+ G V W+ + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 517 MQTRTFKF 540
Q K+
Sbjct: 142 EQRCVLKW 149
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.011
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRXRVSNNGSVSWIKRLDISTPISMQLDXWPNDM 519
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 520 QTRTFKF 540
Q KF
Sbjct: 123 QHCDMKF 129
Score = 25.4 bits (53), Expect = 0.69
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 31.1 bits (67), Expect = 0.014
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRXRVSNNGSVSWIKRLDISTPISMQLDXWPNDM 519
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 520 QTRTFKF 540
Q KF
Sbjct: 123 QHCDMKF 129
Score = 25.4 bits (53), Expect = 0.69
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 30.7 bits (66), Expect = 0.018
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 299
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 300 LSWNAGGVGLQHL 338
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.024
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRXRVSNNGSVSWIKRLDISTPISMQLDXWPNDM 519
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 520 QTRTFKF 540
Q KF
Sbjct: 123 QHCDMKF 129
Score = 25.4 bits (53), Expect = 0.69
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 29.9 bits (64), Expect = 0.032
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRXRVSNNGSVSWIKRLDISTPISMQLDXWPNDM 519
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 520 QTRTFKF 540
Q KF
Sbjct: 123 QHCDMKF 129
Score = 25.4 bits (53), Expect = 0.69
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 29.9 bits (64), Expect = 0.032
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRXRVSNNGSVSWIKRLDISTPISMQLDXWPNDM 519
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 520 QTRTFKF 540
Q KF
Sbjct: 123 QHCDMKF 129
Score = 25.4 bits (53), Expect = 0.69
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 27.9 bits (59), Expect = 0.13
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 299
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 300 LSWNAGGVGLQHL 338
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.4 bits (53), Expect = 0.69
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAATTAGDYALRXRVSN-----NGSVSWIKRLDISTPISMQLDXWPND 516
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 517 MQ 522
+Q
Sbjct: 127 IQ 128
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 25.0 bits (52), Expect = 0.92
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = -1
Query: 792 PGXGAPXRTXXPXXQXXXPGXGXPKEXXGTXAXGXVPPSPPS 667
P GAP P P G P G P +PPS
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPS 57
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.6 bits (46), Expect = 4.9
Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAATTAGDYALRXR---VSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 522
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 4.9
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +3
Query: 192 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGLQHLAGVL----GTL 359
+ ++N L + + + ++ + D + N + + S AGGV + AG++ GTL
Sbjct: 239 RAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMCQPVGTL 298
Query: 360 V 362
+
Sbjct: 299 I 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,729
Number of Sequences: 438
Number of extensions: 5228
Number of successful extensions: 44
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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