Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_E11
(930 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 48 2e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 9e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 41 1e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 41 1e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 40 2e-05
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 40 4e-05
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 40 4e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 39 6e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 39 6e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 39 6e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 39 6e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 39 6e-05
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 39 6e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 39 6e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 39 6e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 36 4e-04
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 36 5e-04
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 36 7e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 31 0.020
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 29 0.079
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 27 0.18
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 0.98
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 25 1.3
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 5.2
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 9.1
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 9.1
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 9.1
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 9.1
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 9.1
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 9.1
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 9.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 9.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 9.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 9.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 9.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 9.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 9.1
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 9.1
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 9.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 9.1
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 47.6 bits (108), Expect = 2e-07
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Frame = +2
Query: 62 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 220
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 221 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLXAAXSTGG 373
+ L+ W D + W+ E+G T L V SE +W PD+VL A G
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYG 118
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.2 bits (102), Expect = 9e-07
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +2
Query: 80 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 244
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 245 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 346
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 41.1 bits (92), Expect = 1e-05
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +2
Query: 86 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 253
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 254 IDKRLSWNAGEWGCSTWLVSSERLWRPD 337
+D+RL++ G+ + + R+W+PD
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPD 89
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 41.1 bits (92), Expect = 1e-05
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Frame = +2
Query: 80 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 238
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 239 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 346
++ +W D +L W+ E+G L V S+ +WRPD+VL
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVL 113
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 41.1 bits (92), Expect = 1e-05
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = +2
Query: 107 MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKR 265
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 24 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 81
Query: 266 LSWNAGEWG-CSTWLVSSERLWRPDVVL 346
L WN ++G T V SE +W PD+VL
Sbjct: 82 LKWNPDDYGGVDTLHVPSEHIWLPDIVL 109
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 40.3 bits (90), Expect = 2e-05
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 107 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 271
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 272 WNAGEWGCSTWL-VSSERLWRPDVVL 346
WN E+G L V SE +W PD+VL
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVL 122
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 39.5 bits (88), Expect = 4e-05
Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = +2
Query: 107 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 271
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 272 WNAGEW-GCSTWLVSSERLWRPDVVLLXAA 358
WN E+ G ++ +LW+PD+++ +A
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSA 147
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 39.5 bits (88), Expect = 4e-05
Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = +2
Query: 107 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 271
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 272 WNAGEW-GCSTWLVSSERLWRPDVVLLXAA 358
WN E+ G ++ +LW+PD+++ +A
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSA 147
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 39.1 bits (87), Expect = 6e-05
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLXAA 358
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 39.1 bits (87), Expect = 6e-05
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLXAA 358
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 39.1 bits (87), Expect = 6e-05
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLXAA 358
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 39.1 bits (87), Expect = 6e-05
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLXAA 358
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 39.1 bits (87), Expect = 6e-05
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLXAA 358
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 39.1 bits (87), Expect = 6e-05
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLXAA 358
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.1 bits (87), Expect = 6e-05
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = +2
Query: 107 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 271
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 272 WNAGEWGCSTWL-VSSERLWRPDVVL 346
W E+G L V S+ +WRPD+VL
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVL 117
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.1 bits (87), Expect = 6e-05
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = +2
Query: 107 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 271
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 272 WNAGEWGCSTWL-VSSERLWRPDVVL 346
W E+G L V S+ +WRPD+VL
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVL 117
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 36.3 bits (80), Expect = 4e-04
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +2
Query: 161 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 337
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 338 VVL 346
+L
Sbjct: 92 TIL 94
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 35.9 bits (79), Expect = 5e-04
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Frame = +2
Query: 59 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 223
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 224 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLXAA 358
L++ W D + WN ++G L + RLW+PDV++ +A
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSA 116
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 35.5 bits (78), Expect = 7e-04
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 158 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 331
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 332 PDVVLLXAA 358
PD+VL A
Sbjct: 111 PDIVLFNNA 119
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 30.7 bits (66), Expect = 0.020
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +2
Query: 95 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 259
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 260 KRLSWNAGEWGCSTWLVSSERLWRPD 337
RLS+ S + ER+WRPD
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPD 121
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 28.7 bits (61), Expect = 0.079
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Frame = +2
Query: 86 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 253
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 254 IDKRLSWNAGEWGCSTWLVSSE---RLWRPD 337
D RL++ G T V SE +W PD
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPD 97
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 27.5 bits (58), Expect = 0.18
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Frame = +2
Query: 86 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 253
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 254 IDKRLSWNAGEWGCSTWLVSSE---RLWRPD 337
D RL++ G T V SE +W PD
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPD 97
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 25.0 bits (52), Expect = 0.98
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Frame = -2
Query: 923 PPPQP-PXXNP--PXKXPPXXPXL-KPPGXPXXPPXNAXPPRI 807
P PQP P +P P + P P PPG P P + P ++
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQM 63
Score = 22.6 bits (46), Expect = 5.2
Identities = 9/27 (33%), Positives = 10/27 (37%)
Frame = -2
Query: 833 PXNAXPPRITGGXXPAGKXGPPXGXXP 753
P PP + G P G G P P
Sbjct: 34 PQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Score = 21.8 bits (44), Expect = 9.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 304 PSAAAPFPCVPTQS 263
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 853 GGLSXGXXGGXFXGGFXXGGWGGG 924
GG+ G GG G GG GGG
Sbjct: 28 GGVVTGASGGSIVVGANNGGGGGG 51
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 22.6 bits (46), Expect = 5.2
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +3
Query: 393 RVSNNGSVSWXKRLXIRXXXSMXXXHWPXXMXXCT 497
R+S +GSV++ R M ++P CT
Sbjct: 142 RLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 129 PPRFIPPDMYRLRPPPNPRFGP 150
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 129 PPRFIPPDMYRLRPPPNPRFGP 150
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 129 PPRFIPPDMYRLRPPPNPRFGP 150
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 129 PPRFIPPDMYRLRPPPNPRFGP 150
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 129 PPRFIPPDMYRLRPPPNPRFGP 150
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 129 PPRFIPPDMYRLRPPPNPRFGP 150
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 129 PPRFIPPDMYRLRPPPNPRFGP 150
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 378 PPRFIPPDMYRLRPPPNPRFGP 399
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 378 PPRFIPPDMYRLRPPPNPRFGP 399
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 378 PPRFIPPDMYRLRPPPNPRFGP 399
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 378 PPRFIPPDMYRLRPPPNPRFGP 399
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 378 PPRFIPPDMYRLRPPPNPRFGP 399
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 378 PPRFIPPDMYRLRPPPNPRFGP 399
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 377 PPRFIPPDMYRLRPPPNPRFGP 398
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 362 PPRFIPPDMYRLRPPPNPRFGP 383
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -2
Query: 896 PPXKXPPXXPXLKPPGXPXXPP 831
PP PP L+PP P P
Sbjct: 378 PPRFIPPDMYRLRPPPNPRFGP 399
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,168
Number of Sequences: 438
Number of extensions: 5909
Number of successful extensions: 73
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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