Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_E09
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical pr... 35 0.064
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 33 0.26
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.45
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 32 0.59
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 31 1.4
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 30 1.8
Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 30 2.4
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 29 5.5
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 7.3
AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical ... 28 7.3
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +3
Query: 9 LVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 128
L++ + ++LSNRSFR R+ T S + T GVPQG+ LSP
Sbjct: 46 LLIWVNEFLSNRSFRVRIGQTLSSRKFATCGVPQGAVLSP 85
Score = 37.5 bits (83), Expect = 0.012
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 2/169 (1%)
Frame = +1
Query: 130 LLFSLYINDI--LRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRID 303
LLF +Y+NDI + + FADDT +Y S K LQ+A + W + ++
Sbjct: 86 LLFGIYVNDISSILPEKVACKQFADDTKLYAS-TPKTESENNLQSALDAVVDWTKGSKLT 144
Query: 304 INPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTL 483
+N +K T+ + + RR++ + PI + LG +
Sbjct: 145 LNQSK--------------TVHVTVGKRRID------FKYHLDGYPIERKAITRDLGFLI 184
Query: 484 DSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRP 630
++ F H + + A F L ++ +K + + LYKT IRP
Sbjct: 185 SEKLDFSDHWRKCINLAKFQLANMFNKYSTSNKKLM---ILLYKTFIRP 230
>Z47067-3|CAA87330.2| 446|Caenorhabditis elegans Hypothetical
protein C43C3.3 protein.
Length = 446
Score = 35.1 bits (77), Expect = 0.064
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +1
Query: 28 TTCRTVRSDIESRERVPGPVTSQ-----PESRKAPPSPRLLFSLYINDILRSPETHLALF 192
T TV S IES E V P++ P ++ P P+ +I I+ L LF
Sbjct: 332 TNSLTVVSRIESAELVASPISQPTIVDTPSEQRRDPCPKSSNMGFIPLIIMGSLASLLLF 391
Query: 193 ADDTAIYYSCRKKAL 237
+ AIY+ C+ K++
Sbjct: 392 SAGAAIYFGCKLKSM 406
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 319 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 456
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 494
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 319 STAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 456
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
M02E1.1a protein.
Length = 1077
Score = 31.9 bits (69), Expect = 0.59
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +1
Query: 364 LSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRA 534
++ PLP+ P VRP T FD IP+ ++G + T + R RA
Sbjct: 890 MATPLPSFN-GRPPSVVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 337 KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAP 456
K +PP + +PLP RR + P V P + P P P
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRPRPP 272
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 439 PIPWAPKVKYLGVTLDSRMTFRPHIKTV 522
PI + + LG+ DS++TF+PHIK +
Sbjct: 188 PISPSNIARDLGILTDSKLTFKPHIKKI 215
>Z74026-2|CAD54122.1| 588|Caenorhabditis elegans Hypothetical
protein B0240.4 protein.
Length = 588
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 379 PTRRVNNPAPAVRPITMFDQPIPW 450
P R V++P +PIT+FDQ + W
Sbjct: 46 PNRTVSSPRVQQKPITIFDQIVDW 69
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 6 RLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQFVYQRYTPVSGD 176
++ L + +YL R R + S+ + GVPQGS +SP F Y + P D
Sbjct: 501 KIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTF-YLKDMPTQQD 556
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 24 RDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSP 128
+++L NR+F ++ S+ + +++GVPQGS P
Sbjct: 854 KEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGP 889
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 395 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 270
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>AC024812-3|AAF59551.1| 183|Caenorhabditis elegans Hypothetical
protein Y54E10BR.5 protein.
Length = 183
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -3
Query: 425 VIGRTAGAGLLTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRN 282
V+GRT G LL + GM++++ P LK + F+GL + H N
Sbjct: 141 VVGRTKG--LLPYV---GMVTIIMNDYPKLKYAVLAFLGLFVLLHKEN 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,718,031
Number of Sequences: 27780
Number of extensions: 467707
Number of successful extensions: 1682
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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