Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_E06
(860 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 9e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 46 3e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 3e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 44 2e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 43 3e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 42 6e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 42 6e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 41 2e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 32 0.006
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 32 0.008
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 31 0.014
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 26 0.39
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 26 0.51
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 3.6
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 4.8
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 8.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 8.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 8.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 8.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 8.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 8.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 8.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.4
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 51.6 bits (118), Expect = 9e-09
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +3
Query: 96 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVDLTLHLRHA---NIRESEST 254
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 255 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 428
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 429 VSNNGSVSW 455
+ G V W
Sbjct: 127 LHYTGKVLW 135
Score = 25.4 bits (53), Expect = 0.68
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSRMHNSXXMD 573
+P D QTC KFGS ++ +D
Sbjct: 152 FPFDQQTCFMKFGSWTYDGIQID 174
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 47.6 bits (108), Expect = 1e-07
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Frame = +3
Query: 114 CENATSLSLMIDSLLATYDRESPPDSKIVVDLTLHLR-------HANIRESESTVRILAD 272
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 446
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 447 VSW 455
V W
Sbjct: 137 VEW 139
Score = 26.2 bits (55), Expect = 0.39
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 490 MQLDNWPNDMQTCTFKFGSRMHNSXXMD 573
+ ++ +P D QTC KFGS ++ +D
Sbjct: 151 IDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 47.2 bits (107), Expect = 2e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +3
Query: 114 CENATSLSLMIDS---LLATYDRESPPDSKIV--VDLTLHLRHANIRESESTVRILADLQ 278
C++ TS S + L YDR+ P+ K +D L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 279 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 380
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
Score = 22.6 bits (46), Expect = 4.8
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSRMHNS 561
WP D+ CT S H S
Sbjct: 166 WPYDILNCTIHIASWSHGS 184
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.4 bits (105), Expect = 3e-07
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGS 446
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSRMHNSXXMDFVI 582
+P D Q C KFGS ++ +D V+
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.4 bits (105), Expect = 3e-07
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGS 446
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSRMHNSXXMDFVI 582
+P D Q C KFGS ++ +D V+
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 46.4 bits (105), Expect = 3e-07
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Frame = +3
Query: 87 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVDLTLHLRH---ANIRES 245
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 246 ESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 419
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 420 ---RARVSNNGSVSW 455
+A + + G V W
Sbjct: 121 IMTKAILHHTGKVVW 135
Score = 25.4 bits (53), Expect = 0.68
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 490 MQLDNWPNDMQTCTFKFGSRMHNSXXMD 573
+ ++ +P D QTC KFGS ++ +D
Sbjct: 147 IDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.4 bits (105), Expect = 3e-07
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSKIVVDLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 305
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 455
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
Score = 26.2 bits (55), Expect = 0.39
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 490 MQLDNWPNDMQTCTFKFGSRMHNSXXMD 573
+ ++ +P D Q+C KFGS +N +D
Sbjct: 160 INVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGS 446
G Y V++NGS
Sbjct: 85 GTYQTSVVVTHNGS 98
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSRMHNSXXMDFVI 582
+P D Q C KFGS ++ +D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 45.2 bits (102), Expect = 8e-07
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP--DSKIVVDLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 305
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 455
W E+G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 26.2 bits (55), Expect = 0.39
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 490 MQLDNWPNDMQTCTFKFGSRMHNSXXMD 573
+ ++ +P D QTC KFGS ++ +D
Sbjct: 155 IDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGS 446
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSRMHNSXXMDFVI 582
+P D Q C KFGS ++ +D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGS 446
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSRMHNSXXMDFVI 582
+P D Q C KFGS ++ +D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGS 446
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSRMHNSXXMDFVI 582
+P D Q C KFGS ++ +D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGS 446
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSRMHNSXXMDFVI 582
+P D Q C KFGS ++ +D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGS 446
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 490 MQLDNWPNDMQTCTFKFGSRMHNSXXMDFVI 582
M + +P D Q C KFGS ++ +D V+
Sbjct: 113 MDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 43.6 bits (98), Expect = 2e-06
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRESPPD---SKIVVDLTLHLRHAN-IRESESTVRILADLQMNW 287
N +++S ++D+LL YD PD V++ + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 288 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 386
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 30.3 bits (65), Expect = 0.024
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 463 RLDISTPISMQLDNWPNDMQTCTFKFGS 546
RL I M L+N+P D Q C +FGS
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 43.2 bits (97), Expect = 3e-06
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Frame = +3
Query: 93 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVDLTLHLRHA-NIRESESTV 257
A+A++ + +++ LL TY+ E P ++ +V+ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 258 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 431
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 432 SNNGS 446
NNG+
Sbjct: 131 KNNGT 135
Score = 25.0 bits (52), Expect = 0.90
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSRMHNSXXMDFVIDKR----XYSMFESGXWDV 627
+P D Q C KFGS ++ +D + S +G WD+
Sbjct: 155 FPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 42.3 bits (95), Expect = 6e-06
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Frame = +3
Query: 141 MIDSLLATYDRESPP--DSKIVVDLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 305
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 455
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 26.6 bits (56), Expect = 0.29
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 487 SMQLDNWPNDMQTCTFKFGSRMHNSXXMD 573
S+ ++ +P D+QTC K GS ++ +D
Sbjct: 154 SIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 42.3 bits (95), Expect = 6e-06
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +3
Query: 195 IVVDLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 371
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 372 VVLLNAAATTAGDYALRAR--VSNNGSVSW 455
+L N A + VS+ G V W
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 40.7 bits (91), Expect = 2e-05
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +3
Query: 231 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAG 407
N+ E ++ L+ W D +L W+ ++G + +++W+PD+VL N A G
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 121
Query: 408 DYALRAR----VSNNGSVSW 455
+Y +R + + NG V W
Sbjct: 122 NYEVRYKSNVLIYPNGDVLW 141
Score = 29.1 bits (62), Expect = 0.055
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +1
Query: 505 WPNDMQTCTFKFGSRMHNSXXMDFVI--DKRXYSM---FESGXWDVTDL 636
+P D QTC KFGS N + + +K + ++SG WD+ ++
Sbjct: 158 FPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIINV 206
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 33.1 bits (72), Expect = 0.003
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 502 NWPNDMQTCTFKFGSRMHNSXXMDFVIDKRXYSM 603
+WP D C FGS +H+ ++ +DK+ + M
Sbjct: 175 SWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.3 bits (70), Expect = 0.006
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 13/124 (10%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRESPPD---SKIVVDLTLH-LRHANIRESESTVRILADLQMNW 287
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 288 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 440
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 441 GSVS 452
GS++
Sbjct: 124 GSIT 127
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 31.9 bits (69), Expect = 0.008
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Frame = +3
Query: 129 SLSLMIDSLLATYDRESPPD----SKIVVDLTLHLRHAN-IRESESTVRILADLQMNWID 293
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 294 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 386
RLS+ S + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
Score = 26.6 bits (56), Expect = 0.29
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 463 RLDISTPISMQLDNWPNDMQTCTFKFGS 546
RL I M+L N+P D Q+C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.1 bits (67), Expect = 0.014
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRESPPD---SKIVVDLTLH-LRHANIRESESTVRILADLQMNW 287
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 288 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 440
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 441 GSVS 452
GS++
Sbjct: 124 GSIT 127
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 26.2 bits (55), Expect = 0.39
Identities = 9/41 (21%), Positives = 22/41 (53%)
Frame = +1
Query: 457 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSXXMDFV 579
+ +L + +M+ +++P+D Q C+ S H + + F+
Sbjct: 123 MSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 25.8 bits (54), Expect = 0.51
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 463 RLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSXXM 570
RL + ++L+ +P D+Q C F S HN M
Sbjct: 135 RLQATLNCGLRLEKFPFDVQECPLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.0 bits (47), Expect = 3.6
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +3
Query: 195 IVVDLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 356
++VD + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 357 LWRPDVVLLNA 389
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.6 bits (46), Expect = 4.8
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +1
Query: 463 RLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSXXMDFVID 585
+L + +M +P+D Q C + S H + M F D
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWD 196
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = -3
Query: 576 EIHXXTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRR 400
+IH P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 399 WLQPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFE 274
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = -3
Query: 576 EIHXXTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRR 400
+IH P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 399 WLQPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFE 274
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = -3
Query: 576 EIHXXTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRR 400
+IH P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 399 WLQPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFE 274
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = -3
Query: 576 EIHXXTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRR 400
+IH P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 399 WLQPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFE 274
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = -3
Query: 576 EIHXXTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRR 400
+IH P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 399 WLQPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFE 274
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 8.4
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = -3
Query: 576 EIHXXTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRR 400
+IH P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 399 WLQPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFE 274
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 8.4
Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = -3
Query: 576 EIHXXTIVHPRTELERASLHVVGPI-V*LHRNWSANVQALYPRRRSRY*IHGRGERSPRR 400
+IH P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 399 WLQPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFE 274
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 338 PSAAAPFPCVPTQS 297
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,915
Number of Sequences: 438
Number of extensions: 4647
Number of successful extensions: 83
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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