Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_E04
         (861 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0042 - 12731228-12731362,12731984-12732046,12732136-127322...    33   0.29 
07_03_1476 + 26798812-26798838,26799162-26799237,26799322-268000...    31   1.6  
09_02_0559 + 10666974-10667078,10667251-10667614,10671204-106715...    30   2.7  
06_01_1191 + 10240754-10240909,10241477-10241547,10241872-10242910     29   3.6  
02_01_0700 + 5229681-5229719,5230235-5230334,5230406-5230463,523...    29   3.6  
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729...    29   6.3  

>07_03_0042 -
           12731228-12731362,12731984-12732046,12732136-12732207,
           12732783-12732855,12732937-12733005,12733375-12733439,
           12733677-12734087,12734186-12734230,12734338-12734413,
           12734555-12734629,12735101-12735207,12736573-12736635
          Length = 417

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +3

Query: 147 RNQEVTSFYLVFNKIMSTLKLTSEVRSGLYSHWRD 251
           ++Q  TS Y +FNK+ STL   S V SG ++  RD
Sbjct: 159 KSQAGTSGYTLFNKLRSTLSSASPVLSGAFAKLRD 193


>07_03_1476 +
           26798812-26798838,26799162-26799237,26799322-26800055,
           26800397-26800546,26800659-26801042
          Length = 456

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -2

Query: 347 VCCIYALVAYH-H*YSDLHHVFFFCCT 270
           +CCI  L  Y+ H   D+H + F CCT
Sbjct: 143 ICCITRLSLYNVHLDGDIHRILFDCCT 169


>09_02_0559 +
           10666974-10667078,10667251-10667614,10671204-10671541,
           10671701-10671706,10672019-10672255
          Length = 349

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 465 HLLTEIQHVTSYCKKLRQVQISSKIDRNNG 554
           H++ ++ H+ S+C  LR  ++   I  N G
Sbjct: 221 HVVVQLAHIKSFCSLLRNTEVKLNIPNNKG 250


>06_01_1191 + 10240754-10240909,10241477-10241547,10241872-10242910
          Length = 421

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = +3

Query: 204 KLTSEVRSGLYSHWRDVFEHVRSTAKKKNMMQIRILVVV 320
           +L +++ +G  SHW  + + VR     KN+ ++++L +V
Sbjct: 113 RLITDLHTGCSSHWHRIKDGVRVPRGIKNLKRLKVLEIV 151


>02_01_0700 +
           5229681-5229719,5230235-5230334,5230406-5230463,
           5230542-5230898,5230991-5231088,5232054-5232144,
           5232183-5232243
          Length = 267

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 20/77 (25%), Positives = 37/77 (48%)
 Frame = +3

Query: 342 AYVSRVITSLLPRWKI*ATKKSSHLTFWLMLPSLTVDFITWHLLTEIQHVTSYCKKLRQV 521
           A ++  +TS+    K+ AT ++  +T  + L  +T      +    +  VTS+C+ L  +
Sbjct: 127 AQITVTVTSVSKMTKLHATNEAVPITPAIQLVEITAPAAADNYNDVVSAVTSFCEYLAPL 186

Query: 522 QISSKIDRNNGSVMTSG 572
              SK   + G V T+G
Sbjct: 187 LHLSKPGNSTGIVPTAG 203


>03_02_0308 -
           7297228-7298008,7298495-7298576,7298612-7298669,
           7298723-7298835,7298924-7299034,7299480-7299597,
           7299706-7299809,7300570-7300665,7301806-7302307
          Length = 654

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 399 SWLRSSIEVTETLLHDLRMLHLRSCGVP 316
           SWLR        ++ DL +LHLRS G P
Sbjct: 37  SWLRGEFAAANAII-DLLLLHLRSVGEP 63


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,285,952
Number of Sequences: 37544
Number of extensions: 425950
Number of successful extensions: 880
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)