Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_D13
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...    71   9e-13
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...    70   2e-12

>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score = 71.3 bits (167), Expect = 9e-13
 Identities = 42/111 (37%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
 Frame = +1

Query: 496 RXCTVVXVXAHTPX-KLXXQRRXKAQLMXXQLNCGXXXDKMKWAXXHLXXXIPXXSVFAQ 672
           +  ++V V AHT   K+   ++ KA LM  Q+N G   DK+ +        IP  +VF +
Sbjct: 155 KYASIVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQK 214

Query: 673 HEMXDCIGVXSGKGYDXVVSRWXXXKLPCPXTRVL*KY-LX*SXXPSRVSF 822
            EM D IGV  GKGY+ VV+RW   +LP    R L K     +  P+RVS+
Sbjct: 215 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 265



 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 37/112 (33%), Positives = 44/112 (39%)
 Frame = +3

Query: 138 DPXXPVXXTXXIGYKXGXTQXVXXPXRPGXEXNSXXIXXAVXIXXTPPXVXVGXVXYXXT 317
           D   P   T  +GYK G T  V    +PG + +      AV I  TPP V VG V Y  T
Sbjct: 36  DVSKPCHLTSFVGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKT 95

Query: 318 PXXLHXXXXVWAEHMSXHCXXHFYXXWXGCNXXAFXXXXXXXXDELGXXSXQ 473
           P  L     VWA+H+S      FY  W      AF         + G    Q
Sbjct: 96  PRGLRSLNSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQ 147


>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
 Frame = +1

Query: 496 RXCTVVXVXAHTPX-KLXXQRRXKAQLMXXQLNCGXXXDKMKWAXXHLXXXIPXXSVFAQ 672
           +  +VV V  HT   K+   ++ KA LM  Q+N G   DK+ +        IP  +VF +
Sbjct: 155 KYASVVRVIVHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQK 214

Query: 673 HEMXDCIGVXSGKGYDXVVSRWXXXKLPCPXTRVL*KY-LX*SXXPSRVSF 822
            EM D IGV  GKGY+ VV+RW   +LP    R L K     +  P+RVS+
Sbjct: 215 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSY 265



 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 37/112 (33%), Positives = 44/112 (39%)
 Frame = +3

Query: 138 DPXXPVXXTXXIGYKXGXTQXVXXPXRPGXEXNSXXIXXAVXIXXTPPXVXVGXVXYXXT 317
           D   P   T  +GYK G T  V    +PG + +      AV I  TPP V VG V Y  T
Sbjct: 36  DVNKPCHLTSFVGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPIVVVGLVAYVKT 95

Query: 318 PXXLHXXXXVWAEHMSXHCXXHFYXXWXGCNXXAFXXXXXXXXDELGXXSXQ 473
           P  L     VWA+H+S      FY  W      AF         + G    Q
Sbjct: 96  PRGLRSLNSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQ 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,113,496
Number of Sequences: 37544
Number of extensions: 71064
Number of successful extensions: 34
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)