Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_D13
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 81 1e-15
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 81 1e-15
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 81 1e-15
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 81 1e-15
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 81 1e-15
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 81 1e-15
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 73 2e-13
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 73 2e-13
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 80.6 bits (190), Expect = 1e-15
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +1
Query: 496 RXCTVVXVXAHTPXKLXXQRRXKAQLMXXQLNCGXXXDKMKWAXXHLXXXIPXXSVFAQH 675
+ C+ + V AHT K+ +R+ KA L+ Q+N G K+ WA HL + +VFAQ
Sbjct: 155 KYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQD 214
Query: 676 EMXDCIGVXSGKGYDXVVSRWXXXKLPCPXTRVL*KY-LX*SXXPSRVSF 822
EM D IGV G G+ V SRW KLP + L K + PSRV+F
Sbjct: 215 EMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAF 264
Score = 73.3 bits (172), Expect = 2e-13
Identities = 38/115 (33%), Positives = 46/115 (40%)
Frame = +3
Query: 138 DPXXPVXXTXXIGYKXGXTQXVXXPXRPGXEXNSXXIXXAVXIXXTPPXVXVGXVXYXXT 317
D P+ T +GYK G T V +PG + N + AV I TPP V G Y T
Sbjct: 36 DKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDT 95
Query: 318 PXXLHXXXXVWAEHMSXHCXXHFYXXWXGCNXXAFXXXXXXXXDELGXXSXQ*DF 482
P +WAEH+S FY W AF DE G + DF
Sbjct: 96 PQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADF 150
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 80.6 bits (190), Expect = 1e-15
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +1
Query: 496 RXCTVVXVXAHTPXKLXXQRRXKAQLMXXQLNCGXXXDKMKWAXXHLXXXIPXXSVFAQH 675
+ C+ + V AHT K+ +R+ KA L+ Q+N G K+ WA HL + +VFAQ
Sbjct: 155 KYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQD 214
Query: 676 EMXDCIGVXSGKGYDXVVSRWXXXKLPCPXTRVL*KY-LX*SXXPSRVSF 822
EM D IGV G G+ V SRW KLP + L K + PSRV+F
Sbjct: 215 EMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAF 264
Score = 73.3 bits (172), Expect = 2e-13
Identities = 38/115 (33%), Positives = 46/115 (40%)
Frame = +3
Query: 138 DPXXPVXXTXXIGYKXGXTQXVXXPXRPGXEXNSXXIXXAVXIXXTPPXVXVGXVXYXXT 317
D P+ T +GYK G T V +PG + N + AV I TPP V G Y T
Sbjct: 36 DKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDT 95
Query: 318 PXXLHXXXXVWAEHMSXHCXXHFYXXWXGCNXXAFXXXXXXXXDELGXXSXQ*DF 482
P +WAEH+S FY W AF DE G + DF
Sbjct: 96 PQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADF 150
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 80.6 bits (190), Expect = 1e-15
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +1
Query: 496 RXCTVVXVXAHTPXKLXXQRRXKAQLMXXQLNCGXXXDKMKWAXXHLXXXIPXXSVFAQH 675
+ C+ + V AHT K+ +R+ KA L+ Q+N G K+ WA HL + +VFAQ
Sbjct: 57 KYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQD 116
Query: 676 EMXDCIGVXSGKGYDXVVSRWXXXKLPCPXTRVL*KY-LX*SXXPSRVSF 822
EM D IGV G G+ V SRW KLP + L K + PSRV+F
Sbjct: 117 EMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAF 166
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 80.6 bits (190), Expect = 1e-15
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +1
Query: 496 RXCTVVXVXAHTPXKLXXQRRXKAQLMXXQLNCGXXXDKMKWAXXHLXXXIPXXSVFAQH 675
+ C+ + V AHT K+ +R+ KA L+ Q+N G K+ WA HL + +VFAQ
Sbjct: 155 KYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQD 214
Query: 676 EMXDCIGVXSGKGYDXVVSRWXXXKLPCPXTRVL*KY-LX*SXXPSRVSF 822
EM D IGV G G+ V SRW KLP + L K + PSRV+F
Sbjct: 215 EMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAF 264
Score = 73.3 bits (172), Expect = 2e-13
Identities = 38/115 (33%), Positives = 46/115 (40%)
Frame = +3
Query: 138 DPXXPVXXTXXIGYKXGXTQXVXXPXRPGXEXNSXXIXXAVXIXXTPPXVXVGXVXYXXT 317
D P+ T +GYK G T V +PG + N + AV I TPP V G Y T
Sbjct: 36 DKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDT 95
Query: 318 PXXLHXXXXVWAEHMSXHCXXHFYXXWXGCNXXAFXXXXXXXXDELGXXSXQ*DF 482
P +WAEH+S FY W AF DE G + DF
Sbjct: 96 PQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADF 150
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 80.6 bits (190), Expect = 1e-15
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +1
Query: 496 RXCTVVXVXAHTPXKLXXQRRXKAQLMXXQLNCGXXXDKMKWAXXHLXXXIPXXSVFAQH 675
+ C+ + V AHT K+ +R+ KA L+ Q+N G K+ WA HL + +VFAQ
Sbjct: 57 KYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQD 116
Query: 676 EMXDCIGVXSGKGYDXVVSRWXXXKLPCPXTRVL*KY-LX*SXXPSRVSF 822
EM D IGV G G+ V SRW KLP + L K + PSRV+F
Sbjct: 117 EMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAF 166
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 80.6 bits (190), Expect = 1e-15
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +1
Query: 496 RXCTVVXVXAHTPXKLXXQRRXKAQLMXXQLNCGXXXDKMKWAXXHLXXXIPXXSVFAQH 675
+ C+ + V AHT K+ +R+ KA L+ Q+N G K+ WA HL + +VFAQ
Sbjct: 155 KYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQD 214
Query: 676 EMXDCIGVXSGKGYDXVVSRWXXXKLPCPXTRVL*KY-LX*SXXPSRVSF 822
EM D IGV G G+ V SRW KLP + L K + PSRV+F
Sbjct: 215 EMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAF 264
Score = 73.3 bits (172), Expect = 2e-13
Identities = 38/115 (33%), Positives = 46/115 (40%)
Frame = +3
Query: 138 DPXXPVXXTXXIGYKXGXTQXVXXPXRPGXEXNSXXIXXAVXIXXTPPXVXVGXVXYXXT 317
D P+ T +GYK G T V +PG + N + AV I TPP V G Y T
Sbjct: 36 DKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDT 95
Query: 318 PXXLHXXXXVWAEHMSXHCXXHFYXXWXGCNXXAFXXXXXXXXDELGXXSXQ*DF 482
P +WAEH+S FY W AF DE G + DF
Sbjct: 96 PQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADF 150
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 73.3 bits (172), Expect = 2e-13
Identities = 38/115 (33%), Positives = 46/115 (40%)
Frame = +3
Query: 138 DPXXPVXXTXXIGYKXGXTQXVXXPXRPGXEXNSXXIXXAVXIXXTPPXVXVGXVXYXXT 317
D P+ T +GYK G T V +PG + N + AV I TPP V G Y T
Sbjct: 36 DKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDT 95
Query: 318 PXXLHXXXXVWAEHMSXHCXXHFYXXWXGCNXXAFXXXXXXXXDELGXXSXQ*DF 482
P +WAEH+S FY W AF DE G + DF
Sbjct: 96 PQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADF 150
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 661 VFAQHEMXDCIGVXSGKGYDXVVSRWXXXKLPCPXTRVL*KY-LX*SXXPSRVSF 822
V A +M D IGV G G+ V SRW KLP + L K + PSRV+F
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAF 216
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 73.3 bits (172), Expect = 2e-13
Identities = 38/115 (33%), Positives = 46/115 (40%)
Frame = +3
Query: 138 DPXXPVXXTXXIGYKXGXTQXVXXPXRPGXEXNSXXIXXAVXIXXTPPXVXVGXVXYXXT 317
D P+ T +GYK G T V +PG + N + AV I TPP V G Y T
Sbjct: 36 DKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDT 95
Query: 318 PXXLHXXXXVWAEHMSXHCXXHFYXXWXGCNXXAFXXXXXXXXDELGXXSXQ*DF 482
P +WAEH+S FY W AF DE G + DF
Sbjct: 96 PQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADF 150
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 661 VFAQHEMXDCIGVXSGKGYDXVVSRWXXXKLPCPXTRVL*KY-LX*SXXPSRVSF 822
V A +M D IGV G G+ V SRW KLP + L K + PSRV+F
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAF 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,218,916
Number of Sequences: 27780
Number of extensions: 55658
Number of successful extensions: 42
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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