Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_D07
(864 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0129 - 31883732-31883854,31883989-31884051,31884213-318842... 33 0.22
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.29
02_05_0073 - 25602268-25603182,25603273-25604190 33 0.29
12_01_0927 + 9196230-9196427,9196499-9197190,9197317-9198351,919... 33 0.39
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 32 0.68
09_03_0074 + 12103454-12103613,12104102-12104183,12105145-121052... 31 1.2
01_06_1107 + 34568091-34568341,34568455-34568540,34569204-345692... 31 1.2
04_03_1030 + 21838282-21838593 31 1.6
12_02_1182 + 26751345-26751836 30 2.1
07_03_0502 + 18826595-18826660,18826815-18826885,18828963-188290... 30 2.1
07_01_0279 + 2055310-2055541,2055916-2056235,2056734-2057213 30 2.1
01_06_1324 + 36304444-36304749 30 2.1
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 30 2.7
08_02_0678 - 19971416-19971930,19971970-19973347,19974122-199745... 30 2.7
05_07_0108 + 27735783-27736205 30 2.7
05_01_0126 + 858259-858489,858641-859189,859545-860162 30 2.7
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 30 2.7
09_02_0349 - 7632140-7632234,7632348-7632449,7632864-7632962,763... 29 4.8
06_03_0701 - 23655762-23655857,23656067-23656141,23656245-236563... 29 4.8
05_03_0559 - 15460348-15460357,15460966-15461290,15461340-15462306 29 4.8
05_01_0406 + 3197189-3197389,3197491-3197628,3198463-3198544,319... 29 4.8
10_08_0785 - 20536265-20537032 29 6.3
05_02_0070 - 6327352-6327582,6327684-6327944 29 6.3
06_01_0824 - 6219477-6219556,6220427-6220808,6221415-6221448,622... 28 8.4
04_01_0365 - 4796780-4796971,4797246-4797327,4797417-4797527,479... 28 8.4
02_01_0300 + 2007414-2007665,2009268-2009320,2009409-2009453,200... 28 8.4
>03_06_0129 -
31883732-31883854,31883989-31884051,31884213-31884272,
31884724-31884784,31884934-31885004,31885313-31885389,
31885856-31885913,31885995-31886048,31886279-31886297,
31886359-31886466,31886574-31886690,31886836-31886919,
31887079-31887171,31887279-31887499,31888294-31888371,
31889237-31889499,31890109-31890247
Length = 562
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = -1
Query: 558 LSCRPSTGTSRSNHAPRGPALS--GRRARRVVYLTMPPARAPGPRGCVGE*LKFGQAPPA 385
L R T+ S+ AP P L A P+ A GPRGC ++ G PA
Sbjct: 2 LFARRPLATAASHLAPFSPPLLLFFASASSSCSSAASPSSASGPRGCSAVRMETGAVEPA 61
Query: 384 TAPSTWRTP 358
+ + W TP
Sbjct: 62 STGAIWSTP 70
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.1 bits (72), Expect = 0.29
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = -1
Query: 459 MPPARAPGPRGCVGE*LKFGQAPPATAP--STWRTPDDAQHASTDRQPTGRASVPDSGTV 286
+PP APG +G KF PP P S+ RTP A +S P +P +
Sbjct: 650 VPPPPAPG----IGN--KFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRT 703
Query: 285 FCAGIPQLLPQPRDPKEGNQ 226
G+P P P P N+
Sbjct: 704 NGPGVPSAPPPPPPPPPANR 723
>02_05_0073 - 25602268-25603182,25603273-25604190
Length = 610
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +1
Query: 436 PWCPCWRHGQIDDTACSPST*RRSSRG-MVASGGTCGRSAGESHIRVATSAGIRTMTLSM 612
PW P W ++ T + S R ++ G V G+ + S + + + +
Sbjct: 502 PWTPSWEPNSVESTDRTWSASRSTNNGDEVVEQGSSSHAGARSPLNRSRQSSKQRAAQPE 561
Query: 613 HSKRARVGSARGEXSS 660
HS R+R GS+ G ++
Sbjct: 562 HSVRSRAGSSGGNSNN 577
>12_01_0927 +
9196230-9196427,9196499-9197190,9197317-9198351,
9198437-9198688,9198769-9198879,9198969-9199050,
9199325-9199516
Length = 853
Score = 32.7 bits (71), Expect = 0.39
Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = -1
Query: 456 PPARAPGPRGCVGE*LKFGQAPPATAPSTWRTPDDAQHASTDRQ--PTGRASVPDSGTVF 283
PP AP P L APPA PS +P Q A ++ P G S P S T+
Sbjct: 436 PPLPAPQPVQASPTSLAKQHAPPAP-PSVQTSPPTPQSALVEQVHIPDGTTSEPKSNTLE 494
Query: 282 CAGIPQLLPQPRDPKE 235
+ I L DPKE
Sbjct: 495 LSRIIPKLISTYDPKE 510
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -2
Query: 344 TPPPTDSRRAGRPSPTQGLCSAPVYRSCYLSLEIPRKGTSEGA 216
TPPP RR P P G P R YLS+ + R+G G+
Sbjct: 35 TPPPPPPRRRTPPPPPPGSGPGP-QRPSYLSVALRRRGPPAGS 76
>09_03_0074 +
12103454-12103613,12104102-12104183,12105145-12105200,
12105671-12106048,12106402-12106565
Length = 279
Score = 31.1 bits (67), Expect = 1.2
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = -1
Query: 570 PDVALSCRPSTGTSRSNHAPRGPALSGRRARRV-VYLTMPPARAPGPRGCVGE*LKFGQA 394
PD+A R T+ R P L RR RR +PP + G G+A
Sbjct: 128 PDLAEGERLQPATAPPAERRRRPTLLQRRGRRCRAAAALPPVGSGG-----------GRA 176
Query: 393 PPATAPSTWRTPDDAQHASTDRQPTGRASVP 301
PP + S+ RTP H + D T A+ P
Sbjct: 177 PPGSRRSSCRTPTTPTHVADDTD-TDTAAPP 206
>01_06_1107 +
34568091-34568341,34568455-34568540,34569204-34569292,
34569406-34569530,34569825-34569901,34570210-34570862
Length = 426
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 117 RATTRERRTKPYCARPPGTDAGRRRCNHRRWGEDG 13
R+++ T C PP T++G+++ HR+ +DG
Sbjct: 24 RSSSSSSSTASSCIVPPRTESGKKKSKHRKRAKDG 58
>04_03_1030 + 21838282-21838593
Length = 103
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/81 (30%), Positives = 36/81 (44%)
Frame = +1
Query: 445 PCWRHGQIDDTACSPST*RRSSRGMVASGGTCGRSAGESHIRVATSAGIRTMTLSMHSKR 624
P R G + T C+P+T RR + +AS R A ES A+S R +K
Sbjct: 22 PATRPGATESTGCNPAT-RRGAEASMASSPAKRRDAEES---TASSQAKR-----RGAKG 72
Query: 625 ARVGSARGEXSSRCWGEXSPC 687
+ G+ RG + C E + C
Sbjct: 73 STAGTGRGPATRPCATESTGC 93
>12_02_1182 + 26751345-26751836
Length = 163
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = -1
Query: 126 QRVRATTRERRTKPYCARPPGTDA----GRRRCNHRRW 25
+ V RR +P A+P T GRRRC+ RRW
Sbjct: 66 EMVETKPPSRRPRPSTAKPKKTQEHTGQGRRRCHRRRW 103
>07_03_0502 +
18826595-18826660,18826815-18826885,18828963-18829056,
18829575-18831521
Length = 725
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 543 KVCRREPHPGCHQCGHPDDDAQHALEACP 629
K R EP C CG ++D HAL CP
Sbjct: 418 KTRRLEPMAICSICGREEEDVAHALCRCP 446
>07_01_0279 + 2055310-2055541,2055916-2056235,2056734-2057213
Length = 343
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -2
Query: 350 RSTPPPTDSRRAGRPSPTQGLCSAPVYRSC 261
R PPP D AGR SP L A V+ C
Sbjct: 161 RLPPPPADDLAAGRSSPPPSLQEAEVWTIC 190
>01_06_1324 + 36304444-36304749
Length = 101
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Frame = +3
Query: 327 VGRWRRAARHLAYAKWRER-------LLEELGQTSVTRRRTLEALVPVLEAWSDRR 473
+G W RH A WR R L EE G+ + RRR L A + V AW++ R
Sbjct: 31 LGSWEGRTRHGVGATWRRRKGSGDGCLAEEEGK-APQRRRKLAARLGVGPAWTEER 85
>10_08_0495 - 18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +3
Query: 609 HALEACPRWERSRRXLIAVLGRXLSLRAVIARMLXDQNSWEG 734
H L C +W+++ ++ +L R + L + + D + EG
Sbjct: 1331 HGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEG 1372
>08_02_0678 - 19971416-19971930,19971970-19973347,19974122-19974518,
19974533-19974645,19977436-19977903,19977935-19978059,
19978192-19978452,19984254-19984647
Length = 1216
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +3
Query: 438 LVPVLEAWSDRRHGVLSFHLTQVLSGHGCFGRYLWKVCRREPHPGCHQCGHPDDDAQHAL 617
+ P+ E +S LS HLTQ ++ H + R+ H + CG D+D
Sbjct: 810 IAPIREKFSSEDFESLS-HLTQKVTLHEQRFAKARRNSRKVNHVFSYMCGSDDEDDDDPE 868
Query: 618 EACPRWERSRRXL 656
A W RS++ +
Sbjct: 869 IATAEWVRSKKVI 881
>05_07_0108 + 27735783-27736205
Length = 140
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 123 RVRATTRERRTKPYCARPPGTDAGRRRCNHRRWGE 19
R+ +R RR + RPP DAG R RRWG+
Sbjct: 82 RINVVSRIRRER----RPPDDDAGGRGRQRRRWGK 112
>05_01_0126 + 858259-858489,858641-859189,859545-860162
Length = 465
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 505 SSRGMVASGGTCGRSAGESHIRVATSAGIRTMTLSMHSK-RARVGSARGEXSSRC-WGEX 678
S R V +GG +A H+ S IR+ + S HS+ R+ GS+ G+ + W +
Sbjct: 244 SWRTTVHTGGRATATASHEHVSRPISGVIRSSSSSSHSRSRSSEGSSSGQHQRQSRWDQP 303
Query: 679 SP 684
P
Sbjct: 304 PP 305
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = -1
Query: 456 PPARAPGPRGCVGE*LKFGQAPPATAPSTWRTPDDAQHASTDRQ--PTGRASVPDSGTVF 283
PP AP P APPA PS +P Q A ++ P G S P S T+
Sbjct: 518 PPLPAPQPVQASPTSPAKQHAPPAP-PSVQTSPPTPQSALVEQVHIPDGTTSEPKSNTLE 576
Query: 282 CAGIPQLLPQPRDPKE 235
+ I L DPKE
Sbjct: 577 LSRIIPKLISTYDPKE 592
>09_02_0349 -
7632140-7632234,7632348-7632449,7632864-7632962,
7633517-7633622,7633897-7633978,7634068-7634178,
7634259-7634510,7634596-7635688,7636157-7636829,
7636920-7637117
Length = 936
Score = 29.1 bits (62), Expect = 4.8
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = -1
Query: 456 PPARAPGPRGCVGE*LKFGQAPPATAPSTWRTPDDAQHASTDRQ--PTGRASVPDSGTVF 283
PP AP P APPA PS +P Q A ++ P G S P S T+
Sbjct: 449 PPLPAPQPVQASPTSPAKQHAPPAP-PSVQTSPPTPQSALVEQVHIPDGITSEPKSNTLE 507
Query: 282 CAGIPQLLPQPRDPKE 235
+ I L DPKE
Sbjct: 508 LSRIIPKLISTYDPKE 523
>06_03_0701 -
23655762-23655857,23656067-23656141,23656245-23656301,
23656385-23656501,23657286-23657405,23657491-23657613,
23657967-23658056,23658184-23658309,23658809-23658901,
23658947-23659021,23659115-23659222,23659481-23659552,
23659673-23659735,23660850-23661017
Length = 460
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 589 CPHWWQPGCGSLLQTFHRYLPKQPCPERTCVKWKEST 479
CP+W+ PG SL+ HR L P T + +E T
Sbjct: 243 CPYWFSPGATSLI---HRILDPNPKTRITIEQIREDT 276
>05_03_0559 - 15460348-15460357,15460966-15461290,15461340-15462306
Length = 433
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Frame = -1
Query: 591 DARTG-------GNPDVALSCRPSTGTSRSNHAPRGPALSGRRARRVVYLTMPPARAPGP 433
DARTG G+P A + P +R RG + G RR PPAR P
Sbjct: 62 DARTGAHVAVRQGHPKAAAAALPPMSLARGGR--RGAEVRGAGGRRAPPRARPPARGGAP 119
Query: 432 R 430
R
Sbjct: 120 R 120
>05_01_0406 +
3197189-3197389,3197491-3197628,3198463-3198544,
3198658-3198734,3198829-3198935,3199367-3199505,
3200602-3200718,3200850-3200941,3201096-3201162,
3201249-3201355,3201468-3201546,3201751-3201894,
3202095-3202235
Length = 496
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 275 PAQNTVPE--SGTDARPVGCRSVEACCASSGVRQVEGAVAGGAWPNFSHSP 421
PA + P+ +G + +P S++ + + AGGAWP +HSP
Sbjct: 36 PASSPSPQHPAGAERKPRRVASLDVFRGLTVAMMILVDDAGGAWPGMNHSP 86
>10_08_0785 - 20536265-20537032
Length = 255
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +2
Query: 320 VGCRSVEACCASSGVRQVEGAVAGGAWPNFSHSPTHPR--GPGARAGGMVR*TT 475
VG +V C + GA AG A P SHSP H G G GG V TT
Sbjct: 56 VGLAAVARCARNRRNSGGAGAGAGSASP--SHSPAHAGHFGGGGSGGGGVTTTT 107
>05_02_0070 - 6327352-6327582,6327684-6327944
Length = 163
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 402 GQAPPATAPSTWRTPDDAQHASTDRQPTGRASVPD 298
G PP++ PST P A +A+ D QP+ R V D
Sbjct: 13 GSTPPSSLPSTSPPPPPAANATED-QPSSRQLVYD 46
>06_01_0824 -
6219477-6219556,6220427-6220808,6221415-6221448,
6222214-6222370,6224449-6224575,6224663-6224914
Length = 343
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 504 PALSGRRARRVVYLTMPPARAPGPRGCVGE*LKFGQAPPA 385
P ++GRRA + PP A PRG +F PPA
Sbjct: 102 PMIAGRRANCNIASLGPPRPAQPPRGRASPGAQFQAPPPA 141
>04_01_0365 -
4796780-4796971,4797246-4797327,4797417-4797527,
4797608-4797859,4797945-4800115
Length = 935
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = -1
Query: 396 APPATAPSTWRTPDDAQHASTDRQ--PTGRASVPDSGTVFCAGIPQLLPQPRDPKE 235
APPA PS +P Q A ++ P G S P S T+ + I L DPKE
Sbjct: 538 APPAP-PSVQTSPPTPQSALVEQVHIPDGTTSEPKSNTLELSRIIPKLISTYDPKE 592
>02_01_0300 +
2007414-2007665,2009268-2009320,2009409-2009453,
2009559-2009661
Length = 150
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 14 PSSPQRRWLQRRRPASVPGGRA--QYGFVRRSRVVA 115
P S Q++ QRRRP V GG A G+V + R+ A
Sbjct: 36 PVSGQQQQQQRRRPTDVGGGAAMRSVGYVGKHRLSA 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,200,296
Number of Sequences: 37544
Number of extensions: 732207
Number of successful extensions: 3442
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3439
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -