Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_D07
(864 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 39 0.005
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily ass... 29 4.3
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 28 9.9
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 28 9.9
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 28 9.9
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 28 9.9
U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical pr... 28 9.9
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 38.7 bits (86), Expect = 0.005
Identities = 32/109 (29%), Positives = 42/109 (38%), Gaps = 3/109 (2%)
Frame = -1
Query: 594 PDARTGG-NPDVALSCRPSTGTSRSNH-APRGPALSGRRARRVVYLTMPPARAPGPRGCV 421
PD + G PD +T T++ P GP A Y PA PGP G
Sbjct: 211 PDGQPGAPGPDGQPGAGGTTSTNQPGPPGPAGPPGPAGPAGEDAYAQPSPAGTPGPPGPP 270
Query: 420 GE*LKFGQAPPATAPSTWRTP-DDAQHASTDRQPTGRASVPDSGTVFCA 277
G+ + G PA AP T P DA + + G + P+ G A
Sbjct: 271 GKDGEAGPDGPAGAPGTDGAPGPDAAYCPCPPRTLGAGAYPEGGDAAAA 319
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 32.7 bits (71), Expect = 0.35
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Frame = -1
Query: 513 PRGPALSGRRARRVVYLTMPPARAPGPRGCVGE*LKFGQ-----AP-PATAPSTWRTPDD 352
P P G+R+R T P+ APGP+G G + GQ AP PA AP P +
Sbjct: 187 PGAPGQGGQRSRG----TPGPSGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPGN 242
Query: 351 AQHASTDRQPTGRASVPDSGTVFC 280
A T P G A P +C
Sbjct: 243 AGTPGTPGAP-GNAGAPGGDAAYC 265
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 29.5 bits (63), Expect = 3.2
Identities = 26/83 (31%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Frame = -1
Query: 513 PRGPALSGRRARRVVYLTMPPARAPGPRGCVGE*LKFGQAPPATAP---STWRTPDDAQH 343
P P G+R+R T PA APGP+G G + GQ+ A AP P
Sbjct: 187 PGAPGQGGQRSRG----TPGPAGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPGQ 242
Query: 342 ASTDRQP--TGRASVPDSGTVFC 280
D QP G P +C
Sbjct: 243 PGQDGQPGAPGNDGAPGGDAAYC 265
>U41993-7|AAA83450.2| 733|Caenorhabditis elegans Temporarily
assigned gene nameprotein 153, isoform b protein.
Length = 733
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +1
Query: 454 RHGQIDDTACSPST*RRSSRGMVASGGTCGRSAGESHIRVATSAGIRTMTLSMHSKRARV 633
+HGQ D + S +SRG +G T G H+R A++AG T K+A
Sbjct: 143 KHGQGDLASTDDSGVSSASRGHTPNGST-----GSRHVRAASTAGRFVKTDYEGKKKAHP 197
Query: 634 GSARGEXSSR 663
S E ++
Sbjct: 198 ASFANEEKAK 207
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.9 bits (59), Expect = 9.9
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
Frame = -1
Query: 570 PDVALSCRPSTGTSRSNHAPRGPALSGRRARRVVYLTMPPARAPGPRGCVGE*LKFGQAP 391
PDV++ P T APRG S R + +V L PP P + L P
Sbjct: 557 PDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP-----IQNLLTMPIVP 611
Query: 390 PATAPSTWRTPDDAQHASTDRQPTGRASVPDSGT-VFCAGIPQLLPQPRDPK 238
P + T S+ T R S+ SGT V C QP PK
Sbjct: 612 PPHLIAA--TSTGTHSVSSSAHSTPRHSI--SGTPVHCEPSNSKTSQPPTPK 659
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 9.9
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
Frame = -1
Query: 570 PDVALSCRPSTGTSRSNHAPRGPALSGRRARRVVYLTMPPARAPGPRGCVGE*LKFGQAP 391
PDV++ P T APRG S R + +V L PP P + L P
Sbjct: 848 PDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP-----IQNLLTMPIVP 902
Query: 390 PATAPSTWRTPDDAQHASTDRQPTGRASVPDSGT-VFCAGIPQLLPQPRDPK 238
P + T S+ T R S+ SGT V C QP PK
Sbjct: 903 PPHLIAA--TSTGTHSVSSSAHSTPRHSI--SGTPVHCEPSNSKTSQPPTPK 950
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.9 bits (59), Expect = 9.9
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
Frame = -1
Query: 570 PDVALSCRPSTGTSRSNHAPRGPALSGRRARRVVYLTMPPARAPGPRGCVGE*LKFGQAP 391
PDV++ P T APRG S R + +V L PP P + L P
Sbjct: 863 PDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP-----IQNLLTMPIVP 917
Query: 390 PATAPSTWRTPDDAQHASTDRQPTGRASVPDSGT-VFCAGIPQLLPQPRDPK 238
P + T S+ T R S+ SGT V C QP PK
Sbjct: 918 PPHLIAA--TSTGTHSVSSSAHSTPRHSI--SGTPVHCEPSNSKTSQPPTPK 965
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.9 bits (59), Expect = 9.9
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
Frame = -1
Query: 570 PDVALSCRPSTGTSRSNHAPRGPALSGRRARRVVYLTMPPARAPGPRGCVGE*LKFGQAP 391
PDV++ P T APRG S R + +V L PP P + L P
Sbjct: 863 PDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP-----IQNLLTMPIVP 917
Query: 390 PATAPSTWRTPDDAQHASTDRQPTGRASVPDSGT-VFCAGIPQLLPQPRDPK 238
P + T S+ T R S+ SGT V C QP PK
Sbjct: 918 PPHLIAA--TSTGTHSVSSSAHSTPRHSI--SGTPVHCEPSNSKTSQPPTPK 965
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.9 bits (59), Expect = 9.9
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
Frame = -1
Query: 570 PDVALSCRPSTGTSRSNHAPRGPALSGRRARRVVYLTMPPARAPGPRGCVGE*LKFGQAP 391
PDV++ P T APRG S R + +V L PP P + L P
Sbjct: 557 PDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP-----IQNLLTMPIVP 611
Query: 390 PATAPSTWRTPDDAQHASTDRQPTGRASVPDSGT-VFCAGIPQLLPQPRDPK 238
P + T S+ T R S+ SGT V C QP PK
Sbjct: 612 PPHLIAA--TSTGTHSVSSSAHSTPRHSI--SGTPVHCEPSNSKTSQPPTPK 659
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.9 bits (59), Expect = 9.9
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
Frame = -1
Query: 570 PDVALSCRPSTGTSRSNHAPRGPALSGRRARRVVYLTMPPARAPGPRGCVGE*LKFGQAP 391
PDV++ P T APRG S R + +V L PP P + L P
Sbjct: 848 PDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP-----IQNLLTMPIVP 902
Query: 390 PATAPSTWRTPDDAQHASTDRQPTGRASVPDSGT-VFCAGIPQLLPQPRDPK 238
P + T S+ T R S+ SGT V C QP PK
Sbjct: 903 PPHLIAA--TSTGTHSVSSSAHSTPRHSI--SGTPVHCEPSNSKTSQPPTPK 950
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.9 bits (59), Expect = 9.9
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
Frame = -1
Query: 570 PDVALSCRPSTGTSRSNHAPRGPALSGRRARRVVYLTMPPARAPGPRGCVGE*LKFGQAP 391
PDV++ P T APRG S R + +V L PP P + L P
Sbjct: 863 PDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP-----IQNLLTMPIVP 917
Query: 390 PATAPSTWRTPDDAQHASTDRQPTGRASVPDSGT-VFCAGIPQLLPQPRDPK 238
P + T S+ T R S+ SGT V C QP PK
Sbjct: 918 PPHLIAA--TSTGTHSVSSSAHSTPRHSI--SGTPVHCEPSNSKTSQPPTPK 965
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.9 bits (59), Expect = 9.9
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 1/112 (0%)
Frame = -1
Query: 570 PDVALSCRPSTGTSRSNHAPRGPALSGRRARRVVYLTMPPARAPGPRGCVGE*LKFGQAP 391
PDV++ P T APRG S R + +V L PP P + L P
Sbjct: 863 PDVSIPPPPIPPTHDEMMAPRGTPPSRRSSETMVPLRSPPFGTP-----IQNLLTMPIVP 917
Query: 390 PATAPSTWRTPDDAQHASTDRQPTGRASVPDSGT-VFCAGIPQLLPQPRDPK 238
P + T S+ T R S+ SGT V C QP PK
Sbjct: 918 PPHLIAA--TSTGTHSVSSSAHSTPRHSI--SGTPVHCEPSNSKTSQPPTPK 965
>U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical protein
R02F2.2 protein.
Length = 1182
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = -3
Query: 580 WWQPGCGSLLQTFHRYLPKQPCPERTCVKWKESTPCR--LSDHASSTGTRASRVRRRVTE 407
W G +L T + QP P+ + S PCR L H S SR ++R +
Sbjct: 1081 WIGTSAGCVLSTSVQSARSQPTPDLRVCEIGHSGPCRILLPVHTPSHSNHPSRKQKRSSL 1140
Query: 406 VWPSSSSNR 380
P+ S++
Sbjct: 1141 NVPAQQSSQ 1149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,272,774
Number of Sequences: 27780
Number of extensions: 462349
Number of successful extensions: 1418
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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