Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_D06
(871 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 175 5e-44
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 161 2e-39
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 160 2e-39
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 151 2e-36
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 150 3e-36
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 149 4e-36
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 146 3e-35
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 146 3e-35
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 146 3e-35
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 146 3e-35
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 146 3e-35
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 145 8e-35
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 145 8e-35
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 145 8e-35
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 145 8e-35
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 138 7e-33
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 138 7e-33
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 136 4e-32
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 134 2e-31
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 130 2e-30
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 118 1e-26
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 109 6e-24
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 89 1e-17
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 73 7e-13
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 61 2e-09
AY119533-1|AAM50187.1| 1058|Drosophila melanogaster GH18077p pro... 34 0.29
AE014134-2086|AAF53112.4| 1058|Drosophila melanogaster CG6614-PA... 34 0.29
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 175 bits (427), Expect = 5e-44
Identities = 90/193 (46%), Positives = 122/193 (63%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KK+PG D + N LK LPV+ I LA I NA + FP WK A ++ IHKPGKP
Sbjct: 452 KKSPGIDNVCNATLKALPVRAILYLALIYNAILRVQFFPKQWKMAAILMIHKPGKPEESP 511
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLL ++ K++ERL+ RL D +T +IL D QFGFR HS V+QVHRLT+HIL
Sbjct: 512 ESYRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHILQ 571
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ ++ A+F D+ +AFD+VWH+GLI K+ + P +++ +L +R F RV
Sbjct: 572 AFDDKEY--CNAVFIDMQQAFDRVWHDGLISKVKKL-FPAPYYGVLKSYLEDRRFMVRVR 628
Query: 549 GTRSRPRHLTAGV 587
+ S PR + AGV
Sbjct: 629 NSYSIPRVMRAGV 641
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 161 bits (390), Expect = 2e-39
Identities = 82/193 (42%), Positives = 114/193 (59%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KKAPG D + NR ++LLP Q + L I N+ + FP WK A +I IHK GK +
Sbjct: 255 KKAPGEDLLDNRTIRLLPDQALQFLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDV 314
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLLP++GKI ERL+ RL K + QFGFR +H +Q+HR+ L
Sbjct: 315 DSYRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALE 374
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ K+ GA F D+ +AFD+VWH GL+YK + P +L L+++ FL R+F V+
Sbjct: 375 AM-ENKEYAVGA-FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVD 431
Query: 549 GTRSRPRHLTAGV 587
G +S + + AGV
Sbjct: 432 GYKSSIKPIAAGV 444
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 160 bits (389), Expect = 2e-39
Identities = 82/193 (42%), Positives = 114/193 (59%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KKAPG D + NR ++LLP Q + LA I N+ + FP WK A +I IHK GK +
Sbjct: 453 KKAPGEDLLDNRTIRLLPDQALQFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDV 512
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRP SLLP++GKI ERL+ RL K + QFGFR +H +Q+HR+ L
Sbjct: 513 DSYRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALE 572
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ K+ GA F D+ +AFD+VWH GL+YK + P +L L+++ FL R+F V+
Sbjct: 573 AM-ENKEYAVGA-FLDIQQAFDRVWHPGLLYKAKRL-FPPQLYLVVKSFLEERTFHVSVD 629
Query: 549 GTRSRPRHLTAGV 587
G +S + + AGV
Sbjct: 630 GYKSSIKPIAAGV 642
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 151 bits (365), Expect = 2e-36
Identities = 80/192 (41%), Positives = 109/192 (56%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N LK LP Q I + + NA + FP WK + IHKPGKP E A
Sbjct: 452 KAPGHDVICNATLKALPRQAILYITLVFNAIVRLQYFPYQWKLGIISMIHKPGKPEREPA 511
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLLP+I K++ERL+ R+ + A I + QFGFRA H V+Q+HR+ E IL
Sbjct: 512 SYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQILTA 571
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG 551
+ ++ +LF D+ +AFD+VWH GL K+ +P +++ +L R F R
Sbjct: 572 YDSKEY--CNSLFLDIREAFDRVWHIGLQLKI-KQTLPAPYFGLLKSYLEGRRFAVRFHS 628
Query: 552 TRSRPRHLTAGV 587
S ++ AGV
Sbjct: 629 AISTEHNVAAGV 640
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 150 bits (363), Expect = 3e-36
Identities = 82/193 (42%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N+ +K LP + L I N+ + +P WK A V I KPGK NE
Sbjct: 497 KAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSANEPR 556
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL + KI+ERLL KRL+ K + QFGFR +H QQ+ R+T+ IL
Sbjct: 557 SYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGFRKEHGSEQQIARVTQFILEA 616
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE- 548
R++ A+F D+++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + +
Sbjct: 617 FERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 673
Query: 549 GTRSRPRHLTAGV 587
G SR + AGV
Sbjct: 674 GETSRTGQIGAGV 686
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 149 bits (362), Expect = 4e-36
Identities = 81/193 (41%), Positives = 115/193 (59%), Gaps = 1/193 (0%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N+ +K LP + L I N+ + +P WK A V I KPGK +NE
Sbjct: 509 KAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSSNEPK 568
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL + K++ERLL KRL+ K + QFGFR +H QQ+ R+T+ IL
Sbjct: 569 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 628
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE- 548
R++ A+F D+++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + +
Sbjct: 629 FERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 685
Query: 549 GTRSRPRHLTAGV 587
G SR + AGV
Sbjct: 686 GETSRTGQIGAGV 698
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 146 bits (354), Expect = 3e-35
Identities = 80/193 (41%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N+ +K LP + L I N+ + +P WK A V I KPGK N+
Sbjct: 381 KAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPK 440
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL + K++ERLL KRL+ K + QFGFR +H QQ+ R+T+ IL
Sbjct: 441 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 500
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE- 548
R++ A+F D+++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + +
Sbjct: 501 FERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 557
Query: 549 GTRSRPRHLTAGV 587
G SR + AGV
Sbjct: 558 GETSRAGQIGAGV 570
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 146 bits (354), Expect = 3e-35
Identities = 80/193 (41%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N+ +K LP + L I N+ + +P WK A V I KPGK N+
Sbjct: 497 KAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPK 556
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL + K++ERLL KRL+ K + QFGFR +H QQ+ R+T+ IL
Sbjct: 557 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 616
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE- 548
R++ A+F D+++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + +
Sbjct: 617 FERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 673
Query: 549 GTRSRPRHLTAGV 587
G SR + AGV
Sbjct: 674 GETSRAGQIGAGV 686
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 146 bits (354), Expect = 3e-35
Identities = 80/193 (41%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N+ +K LP + L I N+ + +P WK A V I KPGK N+
Sbjct: 497 KAPGKDLITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPK 556
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL + K++ERLL KRL+ K + QFGFR +H QQ+ R+T+ IL
Sbjct: 557 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 616
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE- 548
R++ A+F D+++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + +
Sbjct: 617 FERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 673
Query: 549 GTRSRPRHLTAGV 587
G SR + AGV
Sbjct: 674 GETSRAGQIGAGV 686
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 146 bits (354), Expect = 3e-35
Identities = 80/193 (41%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N+ +K LP + L I N+ + +P WK A V I KPGK N+
Sbjct: 459 KAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPK 518
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL + K++ERLL KRL+ K + QFGFR +H QQ+ R+T+ IL
Sbjct: 519 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 578
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE- 548
R++ A+F D+++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + +
Sbjct: 579 FERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 635
Query: 549 GTRSRPRHLTAGV 587
G SR + AGV
Sbjct: 636 GETSRAGQIGAGV 648
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 146 bits (354), Expect = 3e-35
Identities = 80/193 (41%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG D I N+ +K LP + L I N+ + +P WK A V I KPGK N+
Sbjct: 497 KAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPK 556
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL + K++ERLL KRL+ K + QFGFR +H QQ+ R+T+ IL
Sbjct: 557 SYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEA 616
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE- 548
R++ A+F D+++AFD+VWH GL+ KL + +P L +I+ +L+NR+F + +
Sbjct: 617 FERKEY--CSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLYIILESYLTNRTFEVKDQA 673
Query: 549 GTRSRPRHLTAGV 587
G SR + AGV
Sbjct: 674 GETSRAGQIGAGV 686
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 145 bits (351), Expect = 8e-35
Identities = 79/194 (40%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KKAPG+D + N+ + LP + L I N + FP WK A + I KPGK
Sbjct: 52 KKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFAL 111
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLL + K+ ER+L KRL+D + K + QFGFR H Q+ R+T+ IL
Sbjct: 112 NSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILK 171
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ + A F D+ +AFD+VWH+GL+YKL + +P L ++ ++LSNR+F R++
Sbjct: 172 AFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRID 228
Query: 549 G-TRSRPRHLTAGV 587
G T SR ++ AGV
Sbjct: 229 GETTSRIGNIRAGV 242
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 145 bits (351), Expect = 8e-35
Identities = 79/194 (40%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KKAPG+D + N+ + LP + L I N + FP WK A + I KPGK
Sbjct: 499 KKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFAL 558
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLL + K+ ER+L KRL+D + K + QFGFR H Q+ R+T+ IL
Sbjct: 559 NSYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILK 618
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ + A F D+ +AFD+VWH+GL+YKL + +P L ++ ++LSNR+F R++
Sbjct: 619 AFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRID 675
Query: 549 G-TRSRPRHLTAGV 587
G T SR ++ AGV
Sbjct: 676 GETTSRIGNIRAGV 689
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 145 bits (351), Expect = 8e-35
Identities = 79/194 (40%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KKAPG+D + N+ + LP + L I N + FP WK A + I KPGK
Sbjct: 499 KKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFAL 558
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLL + K+ ER+L KRL+D + K + QFGFR H Q+ R+T+ IL
Sbjct: 559 NSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILK 618
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ + A F D+ +AFD+VWH+GL+YKL + +P L ++ ++LSNR+F R++
Sbjct: 619 AFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRID 675
Query: 549 G-TRSRPRHLTAGV 587
G T SR ++ AGV
Sbjct: 676 GETTSRIGNIRAGV 689
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 145 bits (351), Expect = 8e-35
Identities = 79/194 (40%), Positives = 113/194 (58%), Gaps = 1/194 (0%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KKAPG+D + N+ + LP + L I N + FP WK A + I KPGK
Sbjct: 499 KKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFAL 558
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLL + K+ ER+L KRL+D + K + QFGFR H Q+ R+T+ IL
Sbjct: 559 NSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILK 618
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ + A F D+ +AFD+VWH+GL+YKL + +P L ++ ++LSNR+F R++
Sbjct: 619 AFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLFDLLENYLSNRTFSVRID 675
Query: 549 G-TRSRPRHLTAGV 587
G T SR ++ AGV
Sbjct: 676 GETTSRIGNIRAGV 689
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 138 bits (335), Expect = 7e-33
Identities = 73/193 (37%), Positives = 111/193 (57%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
+K+PG DGI N +LK LP I + I N + FP WK A ++ I KPGKP +
Sbjct: 476 RKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNP 535
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLL + KI E+L++ RL F+ + L Q+GFR + + +L +I
Sbjct: 536 ESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKE 595
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ ++ + G + D+ AFD VWH+GL++KL +G P L+ I+++FL++R F +
Sbjct: 596 SIQSKQSV--GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLN 653
Query: 549 GTRSRPRHLTAGV 587
++S R L AGV
Sbjct: 654 SSQSARRILNAGV 666
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 138 bits (335), Expect = 7e-33
Identities = 73/193 (37%), Positives = 111/193 (57%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
+K+PG DGI N +LK LP I + I N + FP WK A ++ I KPGKP +
Sbjct: 424 RKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNP 483
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
SYRPISLL + KI E+L++ RL F+ + L Q+GFR + + +L +I
Sbjct: 484 ESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYIKE 543
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
+ ++ + G + D+ AFD VWH+GL++KL +G P L+ I+++FL++R F +
Sbjct: 544 SIQSKQSV--GLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLIKIVQNFLTHRYFSVNLN 601
Query: 549 GTRSRPRHLTAGV 587
++S R L AGV
Sbjct: 602 SSQSARRILNAGV 614
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 136 bits (329), Expect = 4e-32
Identities = 72/193 (37%), Positives = 110/193 (56%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
+K+PG D I R L LP I + + NA FP WK++ ++ I KPGK +
Sbjct: 447 RKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQP 506
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
+SYRPISLL + K++E++L R+ + N L QFGFR KH ++QV+R+T I
Sbjct: 507 SSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRT 566
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
R+ A+F DVA+AFD+VW +GL++K+ + +P +++ +L NR F R +
Sbjct: 567 AFEHREYCT--AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNRVFAIRCD 623
Query: 549 GTRSRPRHLTAGV 587
+ SR + AGV
Sbjct: 624 TSTSRDCAIEAGV 636
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 134 bits (323), Expect = 2e-31
Identities = 71/193 (36%), Positives = 109/193 (56%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
+K+PG D I R L LP I + + NA FP WK++ ++ I KPGK +
Sbjct: 447 RKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQP 506
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
+SYRPISLL + K++E++L R+ + N L QFGFR KH ++QV+R+T I
Sbjct: 507 SSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEIRT 566
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
R+ A+F DVA+AFD+VW +GL++K+ + +P +++ +L N F R +
Sbjct: 567 AFEHREYCT--AIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTHKLLKSYLYNTVFAIRCD 623
Query: 549 GTRSRPRHLTAGV 587
+ SR + AGV
Sbjct: 624 TSTSRDCAIEAGV 636
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 130 bits (314), Expect = 2e-30
Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 1/219 (0%)
Frame = +3
Query: 9 KKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNET 188
KK+PG D I + LP + + + NA FP WK +I I KPGK +
Sbjct: 449 KKSPGYDLITPEMIIQLPHSAVRYITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVA 508
Query: 189 ASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILI 368
+SYRPISLL I K++E+ L RL T + I+ QFGFR H ++QV+R+T I
Sbjct: 509 SSYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEIRT 568
Query: 369 GLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVE 548
R+ A+F DV++AFDKVW +GL++K+ + +P+ +++ +L +R F R
Sbjct: 569 AFEYREYCT--AVFLDVSQAFDKVWLDGLMFKI-KISLPESTHKLLKSYLYDRKFAVRCN 625
Query: 549 GTRSRPRHLTAGV-RKAPHSPRYYLVCISTIYPGSRETI 662
S + AGV + + P YL+ + I SR T+
Sbjct: 626 TATSTVHTIEAGVPQGSVLGPTLYLIYTADIPTNSRLTV 664
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 118 bits (283), Expect = 1e-26
Identities = 67/210 (31%), Positives = 111/210 (52%), Gaps = 1/210 (0%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
K+PG+D + LK L L T L I N +T +P W+ A +I I KP KP ++
Sbjct: 452 KSPGADRVSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDIN 511
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRPISLL +GK E+++ +RL F+ + ++ Q F++ HS + + R+
Sbjct: 512 SYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHSTMDALLRIQHFASNA 571
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG 551
L+ + + L D +AFD+V + ++ +L G+ RL +I+ F++NRSFR R+
Sbjct: 572 LSTKNHV--SILATDFERAFDRVGIHAVLCRLERWGIGPRLYNLIKAFMTNRSFRVRINN 629
Query: 552 TRSRPRHLTAGV-RKAPHSPRYYLVCISTI 638
S L G+ + +P S +++ I I
Sbjct: 630 VTSNSHILHNGIPQGSPLSVVLFMIAIEDI 659
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 109 bits (261), Expect = 6e-24
Identities = 61/177 (34%), Positives = 96/177 (54%)
Frame = +3
Query: 57 LPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETASYRPISLLPAIGKIY 236
LP+ + + + NA FP WK++ +I I KP K + SYRPISLL + K++
Sbjct: 5 LPMCAVMRICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQP-SYRPISLLTCLSKLF 63
Query: 237 ERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIGLNRRKQIPTGALFFD 416
E+ L R+ + + L QF F AKH ++QV+R+T I R+ ALF D
Sbjct: 64 EKGLLLRISPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTAFEHREYCT--ALFLD 121
Query: 417 VAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRHLTAGV 587
VA+AFD+VW +GL++K+ + +P + +++ +L R F R + S + AGV
Sbjct: 122 VAQAFDRVWLDGLMFKIIQL-LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGV 177
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 88.6 bits (210), Expect = 1e-17
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 1/209 (0%)
Frame = +3
Query: 15 APGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETAS 194
APG + I + +K + + N I P +K + +I I KP +T+S
Sbjct: 449 APGLNRISYQMIKNSSHTTKNRITKLFNEIFNSHI-PQAYKTSLIIPILKPNTDKTKTSS 507
Query: 195 YRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIGL 374
YRPISL I KI ++++ KRLW VT N ++ D+QFGF+ K ++++
Sbjct: 508 YRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFK-KGKSTSDCLLYVDYLI--- 563
Query: 375 NRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGT 554
+ ++ T + D ++AFD+V + +I +L +++ I++F+SNR RV
Sbjct: 564 -TKSKMHTSLVTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPH 622
Query: 555 RSRPRHLTAGV-RKAPHSPRYYLVCISTI 638
S P L G+ + +P S +L+ + +
Sbjct: 623 TSSPLPLFNGIPQGSPISVILFLIAFNKL 651
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 72.5 bits (170), Expect = 7e-13
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 6/198 (3%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KAPG DGI +K + + +FP WK+ ++ + K P N
Sbjct: 418 KAPGIDGIPGVIVKAAATARPEVFRDTFQQCLLDGVFPKRWKKMKLVLLLKGKGPANVPR 477
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
SYRP+ LL +GK++ER+L R+ + L +Q+GFR S + + +T+
Sbjct: 478 SYRPLCLLDIVGKLFERILYARIELITESPTGLQGQQYGFRKGKSTLDALKSVTDAARKA 537
Query: 372 LNRRKQIP-----TGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFR 536
L+ + + + DV AF+ ++ + N+GVPD + +I ++ +R
Sbjct: 538 LDGNRWLGGSKKYCAIITLDVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLW 597
Query: 537 YRVE-GTRSRPRHLTAGV 587
Y E G RS ++AGV
Sbjct: 598 YVTEDGPRS--HQVSAGV 613
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 60.9 bits (141), Expect = 2e-09
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Frame = +3
Query: 6 AKKAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHK-PGKPNN 182
++++PG DGI K + + LA++ + + FPA WK V+ + K P K
Sbjct: 448 SRRSPGLDGINGTICKAVWRAIPEHLASLFSRCIRLGYFPAEWKCPRVVSLLKGPDKDKC 507
Query: 183 ETASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHI 362
E +SYR I LLP GK+ E ++ R+ + + QFGFR + CV+ R H+
Sbjct: 508 EPSSYRGICLLPVFGKVLEAIMVNRVREVLPEG---CRWQFGFR-QGRCVEDAWR---HV 560
Query: 363 LIGLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMG 479
+ F D AFD V + + +L ++G
Sbjct: 561 KSSVGASAAQYVLGTFVDFKGAFDNVEWSAALSRLADLG 599
>AY119533-1|AAM50187.1| 1058|Drosophila melanogaster GH18077p
protein.
Length = 1058
Score = 33.9 bits (74), Expect = 0.29
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 23 LRRHPQPRVKTLTSPTDNNVGYHLKCCYDALHLSGGMERSR 145
L+R + + + PTDN+V LK CY LH++G +E SR
Sbjct: 853 LQRQIDDKFQIIKMPTDNSVYGKLKRCYQ-LHINGSVEYSR 892
>AE014134-2086|AAF53112.4| 1058|Drosophila melanogaster CG6614-PA
protein.
Length = 1058
Score = 33.9 bits (74), Expect = 0.29
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 23 LRRHPQPRVKTLTSPTDNNVGYHLKCCYDALHLSGGMERSR 145
L+R + + + PTDN+V LK CY LH++G +E SR
Sbjct: 853 LQRQIDDKFQIIKMPTDNSVYGKLKRCYQ-LHINGSVEYSR 892
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,698,153
Number of Sequences: 53049
Number of extensions: 832760
Number of successful extensions: 2024
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1992
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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