Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_D06
(871 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 87 2e-17
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 77 1e-14
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 77 1e-14
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 77 2e-14
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 40 0.003
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 35 0.087
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 33 0.27
U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms prot... 30 2.5
AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein. 30 2.5
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 86.6 bits (205), Expect = 2e-17
Identities = 65/194 (33%), Positives = 98/194 (50%), Gaps = 3/194 (1%)
Frame = +3
Query: 15 APGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETAS 194
A G DGI ++ LP+ + LA + N +++ I P WK+A+VI I KP K +S
Sbjct: 345 AIGPDGIAQIHIRKLPMCGYSFLAYLYNVSLSTNIIPDKWKKANVIMIPKPKKDPAIASS 404
Query: 195 YRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIGL 374
YRPISLL I K+ E+ + KR+ + + + Q GF+ +HS V ++T I+ GL
Sbjct: 405 YRPISLLSPIAKLLEKAILKRIKNSIESPA----HQHGFKPEHSTTTAVIQVTNDIIGGL 460
Query: 375 NRRKQIPTGALF--FDVAKAFDKVWHNGLIYKLYN-MGVPDRLVLIIRDFLSNRSFRYRV 545
N K P A+ D+ AFDKV L L G+ ++ L + ++L R R
Sbjct: 461 N-MKNPPERAIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSH 519
Query: 546 EGTRSRPRHLTAGV 587
+ S+ L GV
Sbjct: 520 DNHWSKWHTLLGGV 533
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 77.4 bits (182), Expect = 1e-14
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 1/211 (0%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KA G D I LK +I ++ N + P WK + I K G N
Sbjct: 563 KAAGQDKISADFLKSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDREN-LE 621
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
+YRPI LLP + K++ + L R+ + + + EQ GFR S + +H L + +G
Sbjct: 622 NYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPV--EQAGFRRSFSTIDHIHSLQRLLEVG 679
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG 551
R QIP +F D KAFD V H + L G + ++++ N + +
Sbjct: 680 --REYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPF 736
Query: 552 TRSRPRHLTAGVRKA-PHSPRYYLVCISTIY 641
R +T GVR+ P SP + C+ ++
Sbjct: 737 HRPVAVPVTKGVRQGDPISPNLFSACLEHVF 767
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 77.4 bits (182), Expect = 1e-14
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 1/211 (0%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KA G D I LK +I ++ N + P WK + I K G N
Sbjct: 302 KAAGQDKISADFLKSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDREN-LE 360
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
+YRPI LLP + K++ + L R+ + + + EQ GFR S + +H L + +G
Sbjct: 361 NYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPV--EQAGFRRSFSTIDHIHSLQRLLEVG 418
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG 551
R QIP +F D KAFD V H + L G + ++++ N + +
Sbjct: 419 --REYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPF 475
Query: 552 TRSRPRHLTAGVRKA-PHSPRYYLVCISTIY 641
R +T GVR+ P SP + C+ ++
Sbjct: 476 HRPVAVPVTKGVRQGDPISPNLFSACLEHVF 506
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical protein
F20B4.7 protein.
Length = 891
Score = 77.0 bits (181), Expect = 2e-14
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 1/211 (0%)
Frame = +3
Query: 12 KAPGSDGIRNRALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 191
KA G D I LK +I ++ N + P WK + I K G N
Sbjct: 392 KAAGQDKISADFLKSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDREN-LE 450
Query: 192 SYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKHSCVQQVHRLTEHILIG 371
+YRPI LLP + K++ + L R+ + + + EQ GFR S + +H L + +G
Sbjct: 451 NYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPV--EQAGFRRSFSTIDHIHSLQRLLEVG 508
Query: 372 LNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEG 551
R QIP +F D KAFD V H + L G + ++++ N + +
Sbjct: 509 --REYQIPLTLVFIDFKKAFDTVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPF 565
Query: 552 TRSRPRHLTAGVRKA-PHSPRYYLVCISTIY 641
R +T GVR+ P SP + C+ ++
Sbjct: 566 HRPVAVPVTKGVRQGDPISPNLFSACLEHVF 596
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +3
Query: 405 LFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRHLTAG 584
++ D +KAFD++ H+ L+ KL ++ L++ + +FLSNRSFR R+ T S + T G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 585 V-RKAPHSPRYYLVCISTI 638
V + A SP + + ++ I
Sbjct: 77 VPQGAVLSPLLFGIYVNDI 95
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +2
Query: 602 LSPLLFSLYINDIPRVSGDHLAL--FXDD 682
LSPLLF +Y+NDI + + +A F DD
Sbjct: 83 LSPLLFGIYVNDISSILPEKVACKQFADD 111
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +3
Query: 423 KAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRH-LTAGVRKAP 599
KAFD+V H+ L+ KL++ G+ DFLS+R+F +V H +++GV K
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 600 HS-PRYYLVCISTI 638
S P +L+ I+++
Sbjct: 62 VSGPFLFLIFINSL 75
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 34.7 bits (76), Expect = 0.087
Identities = 24/109 (22%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Frame = +3
Query: 159 HKPGKPNNETASYRPISLLPAIGKIYERLLRKRLWDFVTANKILIDEQFGFRAKH--SCV 332
H P + N+E + IS++ I + L++K+L + + + ++ F+ K+ S
Sbjct: 21 HPPERANDEYVQFAQISVVSGIQEELIELVKKKLLESIELQQFIVGRDIEFQEKYIASLT 80
Query: 333 QQVHRLTEHILIGLNRRKQIPTGALFFDVAKAFDKVWHNGLIYKLYNMG 479
+ R H + R +++ + F++ A +K+ NGL + N G
Sbjct: 81 DGLSRYNNHNELEEIRNEKLSSEERHFELESARNKL--NGLRIQNSNFG 127
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 405 LFFDVAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDFLSNRSFRYRVEGTRSRPRHLTAG 584
+F D KAFD V H + L G + + ++++ N + + R +T G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNF-TPFLRPITVPVTKG 98
Query: 585 VRKA-PHSPRYYLVCISTIY 641
VR+ P SP + C+ ++
Sbjct: 99 VRQGDPISPNLFSACLEHVF 118
>U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms protein
1 protein.
Length = 442
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 151 ITSASFHTAGKMQCVIAAFKMVANIVISWT 62
+ +A+F T K+ C++ AFK + +I IS T
Sbjct: 25 VANATFLTISKLICLVVAFKFIKHIPISTT 54
>AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein.
Length = 442
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 151 ITSASFHTAGKMQCVIAAFKMVANIVISWT 62
+ +A+F T K+ C++ AFK + +I IS T
Sbjct: 25 VANATFLTISKLICLVVAFKFIKHIPISTT 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,201,366
Number of Sequences: 27780
Number of extensions: 414449
Number of successful extensions: 1174
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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