Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_D01
(863 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 71 9e-13
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 64 2e-10
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 64 2e-10
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 46 4e-05
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 39 0.004
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 37 0.018
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 35 0.073
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 34 0.17
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 34 0.17
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 32 0.51
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 29 3.6
03_05_0172 - 21488504-21488752,21488862-21489611,21489691-214897... 29 3.6
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 29 4.8
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 28 8.4
03_05_0865 - 28365430-28367640 28 8.4
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 71.3 bits (167), Expect = 9e-13
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +3
Query: 387 ENPXRXVALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXII 566
+ P A +L+PTR LA I +QF ALG++IG+ C ++ GG+D V A+ L+ +PH ++
Sbjct: 107 DKPQALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSLAKRPHIVV 166
Query: 567 AXXGXLVXHL*QYRGF-IHGL*XXX*WMKRXXFXSXIPNAPGHXXPRDXKEPXTYXFSAT 743
G L+ HL +GF ++ L A KE T+ FSAT
Sbjct: 167 GTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKERRTFLFSAT 226
Query: 744 MTIK 755
MT K
Sbjct: 227 MTNK 230
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/65 (32%), Positives = 27/65 (41%)
Frame = +2
Query: 197 TXKDLGVVYVLCEACE*XXXXXXXXXXXXXXXXASLRXDIXGLAXTRXGXTXAFALPILX 376
T +LGVV L AC+ A D+ GL T G T AFALPI+
Sbjct: 42 TFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQ 101
Query: 377 CTXRE 391
++
Sbjct: 102 ALLKQ 106
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +3
Query: 366 PYXXALXENPXRXV--ALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALL 539
P AL E+ R A +L PTR LA I++QF ALG++I + C+++ GG+ +
Sbjct: 40 PIIQALLEHEHRPCFFACVLAPTRELAIQIAKQFEALGSAISLQCSVLIGGIPRTSQTIS 99
Query: 540 LSMKPHXIIAXXGXLVXHL*QYRGF 614
L+ +PH ++ G L+ HL +GF
Sbjct: 100 LAKRPHVVVGTPGRLLDHLTNTKGF 124
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 63.7 bits (148), Expect = 2e-10
Identities = 30/73 (41%), Positives = 42/73 (57%)
Frame = +3
Query: 366 PYXXALXENPXRXVALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLS 545
P L E+P AL L PTR LA+ ++EQF ALGA +G+ C GG D + A L+
Sbjct: 134 PILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKGLA 193
Query: 546 MKPHXIIAXXGXL 584
+PH ++A G +
Sbjct: 194 RRPHVVVATPGRI 206
Score = 31.5 bits (68), Expect = 0.90
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 197 TXKDLGVVYVLCEACE*XXXXXXXXXXXXXXXXASLRXDIXGLAXTRXGXTXAFALPILX 376
T +LG+ L + C+ A D+ G+A T G T AFALPIL
Sbjct: 78 TFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILH 137
Query: 377 CTXREP 394
+P
Sbjct: 138 RLGEDP 143
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +3
Query: 411 LILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXGXLVX 590
LILTPTR LA+ + L + C LI GGL + L P ++A G ++
Sbjct: 269 LILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIID 328
Query: 591 HL 596
HL
Sbjct: 329 HL 330
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/66 (34%), Positives = 30/66 (45%)
Frame = +3
Query: 387 ENPXRXVALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXII 566
E+P R ALILTPTR LA + + + + I GGL LL KP ++
Sbjct: 229 ESPLR--ALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIVV 286
Query: 567 AXXGXL 584
G L
Sbjct: 287 GTPGRL 292
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 37.1 bits (82), Expect = 0.018
Identities = 25/63 (39%), Positives = 31/63 (49%)
Frame = +3
Query: 408 ALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXGXLV 587
ALIL+PTR LA+ + LG + +LI GG L+ P IIA G LV
Sbjct: 99 ALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIATPGRLV 158
Query: 588 XHL 596
HL
Sbjct: 159 HHL 161
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 35.1 bits (77), Expect = 0.073
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 408 ALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXG 578
AL+L PTR LA I + ALG +GV GG +L+ H ++ G
Sbjct: 112 ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPG 168
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +3
Query: 411 LILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXGXL 584
L+L PTR LAS I ++ G S V C + GG L ++A G L
Sbjct: 680 LVLAPTRELASQIQDEAVKFGRSSRVSCTCLYGGTSKGLQLRELERGADIVVATPGRL 737
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +3
Query: 408 ALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXG 578
+L+L PTR LA I + ALG +GV GG +L+ H ++ G
Sbjct: 112 SLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPG 168
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/74 (25%), Positives = 27/74 (36%)
Frame = +3
Query: 405 VALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXGXL 584
+ LI+ PTR L I S+G+ C I GG L ++ G +
Sbjct: 360 IGLIMAPTRELVVQIHSDIKKFAKSLGINCVAIYGGSGVAQQISELKRGAEIVVCTPGRM 419
Query: 585 VXHL*QYRGFIHGL 626
+ L G I L
Sbjct: 420 IDILCTSSGKITNL 433
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +3
Query: 405 VALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXGXL 584
+ALIL+PTR L+ I E+ GV + GG L ++A G L
Sbjct: 403 LALILSPTRELSVQIHEEARKFAYQTGVKVVVAYGGAPITQQLRELERGVEILVATPGRL 462
Query: 585 V 587
+
Sbjct: 463 M 463
>03_05_0172 -
21488504-21488752,21488862-21489611,21489691-21489789,
21489862-21490776,21490847-21490976,21491438-21491583,
21491801-21491896,21492521-21492613,21492702-21492755,
21492897-21492956,21493046-21493171,21493283-21493366,
21493444-21493587,21493667-21493963
Length = 1080
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2
Query: 442 DAXSLVGVSIXATXLXGFSXSAXXYGQGKGTCXTXT 335
DA L+GV + + L GF+ S YGQ GT T T
Sbjct: 149 DAFDLIGVPMIESALAGFNSSLVCYGQ-SGTGKTYT 183
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 405 VALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXGXL 584
+ALIL+PTR L+ I E+ GV + GG L ++A G L
Sbjct: 237 LALILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRL 296
Query: 585 V 587
V
Sbjct: 297 V 297
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +3
Query: 405 VALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXGXL 584
+ALIL+PTR L+ I E+ GV + GG L ++A G L
Sbjct: 317 LALILSPTRELSVQIHEEARKFAYQTGVRVVVAYGGAPIHQQLRELERGVEILVATPGRL 376
Query: 585 V 587
+
Sbjct: 377 M 377
>03_05_0865 - 28365430-28367640
Length = 736
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 311 DIXGLAXTRXGXTXAFALPILXCTXREP 394
D+ G+A T G T AF LP+L R P
Sbjct: 354 DVIGIAETGSGKTAAFVLPMLSYITRLP 381
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,129,291
Number of Sequences: 37544
Number of extensions: 163331
Number of successful extensions: 165
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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