Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_D01
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 78 9e-15
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 63 3e-10
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 63 3e-10
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 42 8e-04
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 38 0.012
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 33 0.35
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 33 0.35
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 33 0.35
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 33 0.35
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 32 0.61
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 32 0.61
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 29 3.2
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 29 3.2
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 5.7
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 77.8 bits (183), Expect = 9e-15
Identities = 37/83 (44%), Positives = 51/83 (61%)
Frame = +3
Query: 366 PYXXALXENPXRXVALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLS 545
P +L ++P L+LTPTR LA I +QF ALG+ IG+ A+I GG+D A+ L+
Sbjct: 101 PVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALA 160
Query: 546 MKPHXIIAXXGXLVXHL*QYRGF 614
+PH I+A G LV HL +GF
Sbjct: 161 RRPHIIVATPGRLVDHLENTKGF 183
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = +2
Query: 206 DLGVVYVLCEACE*XXXXXXXXXXXXXXXXASLRXDIXGLAXTRXGXTXAFALPILXCTX 385
+LGV LC+AC+ A D+ GLA T G T AFA+P+L
Sbjct: 48 ELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLL 107
Query: 386 REP 394
P
Sbjct: 108 DHP 110
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 62.9 bits (146), Expect = 3e-10
Identities = 33/73 (45%), Positives = 42/73 (57%)
Frame = +3
Query: 366 PYXXALXENPXRXVALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLS 545
P L +P ALILTPTR LA I+EQF ALG I + C++I GG + A LS
Sbjct: 146 PILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELS 205
Query: 546 MKPHXIIAXXGXL 584
+PH ++A G L
Sbjct: 206 ERPHVVVATPGRL 218
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 311 DIXGLAXTRXGXTXAFALPIL 373
DI G A T G T AFA+PIL
Sbjct: 128 DILGCARTGTGKTLAFAIPIL 148
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 62.9 bits (146), Expect = 3e-10
Identities = 33/73 (45%), Positives = 42/73 (57%)
Frame = +3
Query: 366 PYXXALXENPXRXVALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLS 545
P L +P ALILTPTR LA I+EQF ALG I + C++I GG + A LS
Sbjct: 146 PILQKLSVDPYGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELS 205
Query: 546 MKPHXIIAXXGXL 584
+PH ++A G L
Sbjct: 206 ERPHVVVATPGRL 218
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 311 DIXGLAXTRXGXTXAFALPIL 373
DI G A T G T AFA+PIL
Sbjct: 128 DILGCARTGTGKTLAFAIPIL 148
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 41.5 bits (93), Expect = 8e-04
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +3
Query: 411 LILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXGXLVX 590
L+L PTR LA + + F L I + L GGLD L P ++A G L+
Sbjct: 223 LVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVATPGRLID 282
Query: 591 HL 596
HL
Sbjct: 283 HL 284
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +3
Query: 408 ALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXGXLV 587
ALI++PTR LA A+GA G C L+ GG D +S + I+ G L+
Sbjct: 151 ALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRIS-GINIIVCTPGRLL 209
Query: 588 XHL 596
H+
Sbjct: 210 QHM 212
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 32.7 bits (71), Expect = 0.35
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 408 ALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLS-MKPHXIIAXXGXL 584
ALI+ PTR L I + AL ++ + I GGL V ++S +P ++A G L
Sbjct: 71 ALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRL 130
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 32.7 bits (71), Expect = 0.35
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 408 ALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLS-MKPHXIIAXXGXL 584
ALI+ PTR L I + AL ++ + I GGL V ++S +P ++A G L
Sbjct: 238 ALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVATPGRL 297
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 32.7 bits (71), Expect = 0.35
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +3
Query: 408 ALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXG 578
ALIL+PTR LA I + ALG + V C GG + L H + G
Sbjct: 97 ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPG 153
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 32.7 bits (71), Expect = 0.35
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +3
Query: 408 ALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXG 578
ALIL+PTR LA I + ALG + V C GG + L H + G
Sbjct: 97 ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPG 153
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 408 ALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXGXLV 587
AL+++PTR LA + LG G+ CA + GG + P ++A G L+
Sbjct: 96 ALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLL 155
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 31.9 bits (69), Expect = 0.61
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 408 ALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXGXLV 587
AL+++PTR LA + LG G+ CA + GG + P ++A G L+
Sbjct: 96 ALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATPGRLL 155
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +3
Query: 408 ALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXG 578
AL++ PTR LA I + ALG + V GG L H ++ G
Sbjct: 100 ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPG 156
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +3
Query: 408 ALILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXG 578
AL++ PTR LA I + ALG + V GG L H ++ G
Sbjct: 100 ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPG 156
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +3
Query: 411 LILTPTRXLASHISEQFXALGASIGVXCALIXGGLDXVXXALLLSMKPHXIIAXXGXLVX 590
L+L PTR LA + E S+G+ + GG A L ++A G L+
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLD 265
Query: 591 HL 596
L
Sbjct: 266 FL 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,730,702
Number of Sequences: 27780
Number of extensions: 135341
Number of successful extensions: 174
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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