Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_C22
         (865 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ278684-2|CAB99192.1|  989|Drosophila melanogaster endonuclease...    77   2e-14
BT003619-1|AAO39622.1| 1167|Drosophila melanogaster GH12052p pro...    29   8.3  
AE014296-1190|AAX52757.1| 1644|Drosophila melanogaster CG33556-P...    29   8.3  
AB061681-1|BAC76439.1| 1644|Drosophila melanogaster ah1644 protein.    29   8.3  

>AJ278684-2|CAB99192.1|  989|Drosophila melanogaster
            endonuclease/reverse transcriptase protein.
          Length = 989

 Score = 77.4 bits (182), Expect = 2e-14
 Identities = 41/97 (42%), Positives = 53/97 (54%)
 Frame = +2

Query: 53   PVLADWVGRDRGCLTFRLTQMLTGHGCFGRYLFKIAGREPTAQCHHCADRDEDDTAEHTL 232
            P L +W   +   + + +TQ LT HGCF  YL +    + TAQC +C D  E  TAEH L
Sbjct: 871  PQLTEWADCEHKTVDYHMTQFLTDHGCFRGYLCRFRHVD-TAQCLYCTDAVE--TAEHIL 927

Query: 233  ARCSGFDEQRAALVAVIGEDLSLPRIVATMLGSDASW 343
              CS F E+RA LVA+ G  LS   +VA M+     W
Sbjct: 928  LHCSRFAEERAQLVALAGSPLSPRGLVAAMMADKIVW 964


>BT003619-1|AAO39622.1| 1167|Drosophila melanogaster GH12052p protein.
          Length = 1167

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 117  NICVSRKVRHPRSRPTQSARTGRTASTVRR 28
            ++  SR +R P  +P  SA   R+ASTVRR
Sbjct: 957  SLSASRPLRMPNGQPLASAAPLRSASTVRR 986


>AE014296-1190|AAX52757.1| 1644|Drosophila melanogaster CG33556-PA
            protein.
          Length = 1644

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 117  NICVSRKVRHPRSRPTQSARTGRTASTVRR 28
            ++  SR +R P  +P  SA   R+ASTVRR
Sbjct: 1434 SLSASRPLRMPNGQPLASAAPLRSASTVRR 1463


>AB061681-1|BAC76439.1| 1644|Drosophila melanogaster ah1644 protein.
          Length = 1644

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 117  NICVSRKVRHPRSRPTQSARTGRTASTVRR 28
            ++  SR +R P  +P  SA   R+ASTVRR
Sbjct: 1434 SLSASRPLRMPNGQPLASAAPLRSASTVRR 1463


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,872,181
Number of Sequences: 53049
Number of extensions: 406206
Number of successful extensions: 1461
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1460
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)