Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_C13
(879 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 152 5e-37
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 152 5e-37
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 141 1e-33
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 133 3e-31
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 128 1e-29
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 128 1e-29
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 128 1e-29
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 125 7e-29
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 121 1e-27
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 85 9e-17
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 85 9e-17
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 85 9e-17
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 85 9e-17
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 77 4e-14
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 73 5e-13
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 71 2e-12
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 71 2e-12
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 71 2e-12
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 71 2e-12
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 71 2e-12
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 61 2e-09
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 44 3e-04
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 43 6e-04
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 43 6e-04
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 40 0.006
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 38 0.014
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 152 bits (369), Expect = 5e-37
Identities = 79/255 (30%), Positives = 134/255 (52%)
Frame = +2
Query: 11 MGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSP 190
+G P L+ I+++FL++R F + ++S+ R L AGVPQG +DIP++
Sbjct: 629 IGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQAT 688
Query: 191 PTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXX 370
L+LFADD VY + + S I + +QS L +++KW+I INP K+ A+ F
Sbjct: 689 NCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRK 748
Query: 371 XXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 550
+ + PI W ++YLG+ D +TF+ HI + + I+ L
Sbjct: 749 PRYLPDRQ-------LRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTL 801
Query: 551 YPMICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAHAGRTHIDTLQSLQSRFCRLTVGAP 730
YP+I ++SK+S+ NK+ ++KT ++ Y S V+ +THI LQ Q++ +L + P
Sbjct: 802 YPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLP 861
Query: 731 WFVRNVDLHXDLGLE 775
++ LH G++
Sbjct: 862 YYTNTKYLHIKAGVQ 876
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 152 bits (369), Expect = 5e-37
Identities = 79/255 (30%), Positives = 134/255 (52%)
Frame = +2
Query: 11 MGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSP 190
+G P L+ I+++FL++R F + ++S+ R L AGVPQG +DIP++
Sbjct: 577 IGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQAT 636
Query: 191 PTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXX 370
L+LFADD VY + + S I + +QS L +++KW+I INP K+ A+ F
Sbjct: 637 NCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRK 696
Query: 371 XXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 550
+ + PI W ++YLG+ D +TF+ HI + + I+ L
Sbjct: 697 PRYLPDRQ-------LRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTL 749
Query: 551 YPMICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAHAGRTHIDTLQSLQSRFCRLTVGAP 730
YP+I ++SK+S+ NK+ ++KT ++ Y S V+ +THI LQ Q++ +L + P
Sbjct: 750 YPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKLIMNLP 809
Query: 731 WFVRNVDLHXDLGLE 775
++ LH G++
Sbjct: 810 YYTNTKYLHIKAGVQ 824
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 141 bits (341), Expect = 1e-33
Identities = 84/267 (31%), Positives = 123/267 (46%), Gaps = 5/267 (1%)
Frame = +2
Query: 38 IIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSP-----PTHL 202
+++ +L R F R S+ + AGVPQG +D+P+ + L
Sbjct: 612 LLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSML 671
Query: 203 ALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXX 382
A FADD V Y SR + A +Q A +W R+W I IN +KS V F
Sbjct: 672 ATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCFTLKR----- 726
Query: 383 XXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMI 562
PP+ + P+P KYLGV LD +TF H+ +R R + + Y ++
Sbjct: 727 ------RTPPPVYIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLL 780
Query: 563 CKRSKMSLRNKVTLYKTCIRAVMTYASVVFAHAGRTHIDTLQSLQSRFCRLTVGAPWFVR 742
RSK+SL NK+T+YK + Y ++ A +HI +Q++Q++ RL G WFVR
Sbjct: 781 SSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCEWFVR 840
Query: 743 NVDLHXDLGLESFXKYXXSGLXXYFDK 823
N LH DL L + Y D+
Sbjct: 841 NTTLHRDLKLATVFDEINKHSSRYHDR 867
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 133 bits (322), Expect = 3e-31
Identities = 77/256 (30%), Positives = 126/256 (49%)
Frame = +2
Query: 11 MGVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSP 190
+ +P+S +++ +L +R F R S+ + AGVPQG DIP +
Sbjct: 601 ISLPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIPTNS 660
Query: 191 PTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXX 370
++ FADDT + SR+ +L + + +W WRI +N K V F
Sbjct: 661 RLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNEQKCKHVTFTLNRQ 720
Query: 371 XXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 550
PP+ L P+P A +V YLGV LD +T+R HI++ + + L
Sbjct: 721 DC-----------PPLLLNSIPLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNL 769
Query: 551 YPMICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAHAGRTHIDTLQSLQSRFCRLTVGAP 730
+ +I S +SL +KV LY + ++ + TY S ++ +A ++ID +Q QS+ R GAP
Sbjct: 770 HWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAP 829
Query: 731 WFVRNVDLHXDLGLES 778
W+VR+ ++ DL + S
Sbjct: 830 WYVRSENIQRDLNIPS 845
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 128 bits (309), Expect = 1e-29
Identities = 78/257 (30%), Positives = 123/257 (47%), Gaps = 8/257 (3%)
Frame = +2
Query: 20 PDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTH 199
P L L+++ FL R+F V+G +SS +P+ AGVPQG +D+P P
Sbjct: 608 PPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVT 667
Query: 200 --------LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 355
+A +ADDT V S++ LQ A QW W + IN K V F
Sbjct: 668 EVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTF 727
Query: 356 QXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAF 535
P ++L + I + KYLG+TLD +TF HI +++
Sbjct: 728 ANRTGSC-----------PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRT 776
Query: 536 ILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAHAGRTHIDTLQSLQSRFCRL 715
+ R+ +I R+K+SL KV +YK+ + + Y V+ A ++H++ ++ LQ++ R
Sbjct: 777 KVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRR 836
Query: 716 TVGAPWFVRNVDLHXDL 766
GAPW++R D+ DL
Sbjct: 837 ISGAPWYMRTRDIERDL 853
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 128 bits (309), Expect = 1e-29
Identities = 78/257 (30%), Positives = 123/257 (47%), Gaps = 8/257 (3%)
Frame = +2
Query: 20 PDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTH 199
P L L+++ FL R+F V+G +SS +P+ AGVPQG +D+P P
Sbjct: 410 PPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVT 469
Query: 200 --------LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 355
+A +ADDT V S++ LQ A QW W + IN K V F
Sbjct: 470 EVDEEDVLIATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTF 529
Query: 356 QXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAF 535
P ++L + I + KYLG+TLD +TF HI +++
Sbjct: 530 ANRTGSC-----------PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRT 578
Query: 536 ILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAHAGRTHIDTLQSLQSRFCRL 715
+ R+ +I R+K+SL KV +YK+ + + Y V+ A ++H++ ++ LQ++ R
Sbjct: 579 KVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRR 638
Query: 716 TVGAPWFVRNVDLHXDL 766
GAPW++R D+ DL
Sbjct: 639 ISGAPWYMRTRDIERDL 655
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 128 bits (308), Expect = 1e-29
Identities = 78/253 (30%), Positives = 119/253 (47%)
Frame = +2
Query: 17 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 196
+P + +++ +L NR F R + + S + AGVPQG D P
Sbjct: 601 LPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNL 660
Query: 197 HLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXX 376
+ FADDT + S+ L ++ +W WRI IN K V F
Sbjct: 661 TTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTFTLNK--- 717
Query: 377 XXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYP 556
PP+ L IP A +V YLGV LD +T+R HI++ L+
Sbjct: 718 --------QTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHW 769
Query: 557 MICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAHAGRTHIDTLQSLQSRFCRLTVGAPWF 736
+I RS +SL K LY + ++ + TY S ++ +A R++ID +Q QSR R+ GAPW+
Sbjct: 770 LINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWY 829
Query: 737 VRNVDLHXDLGLE 775
+RN ++H DL ++
Sbjct: 830 LRNENIHRDLKIK 842
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 125 bits (302), Expect = 7e-29
Identities = 77/253 (30%), Positives = 118/253 (46%)
Frame = +2
Query: 17 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 196
+P + +++ +L N F R + + S + AGVPQG D P
Sbjct: 601 LPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTADFPIDYNL 660
Query: 197 HLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXX 376
+ FADDT + S+ L ++ +W WRI IN K V F
Sbjct: 661 TTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINVQKCKQVTFTLNK--- 717
Query: 377 XXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYP 556
PP+ L IP A +V YLGV LD +T+R HI++ L+
Sbjct: 718 --------QTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHW 769
Query: 557 MICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAHAGRTHIDTLQSLQSRFCRLTVGAPWF 736
+I RS +SL K LY + ++ + TY S ++ +A R++ID +Q QSR R+ GAPW+
Sbjct: 770 LINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWY 829
Query: 737 VRNVDLHXDLGLE 775
+RN ++H DL ++
Sbjct: 830 LRNENIHRDLKIK 842
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 121 bits (292), Expect = 1e-27
Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 8/270 (2%)
Frame = +2
Query: 38 IIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTH------ 199
+++ +L +R F RV + S PR + AGVPQG D+P H
Sbjct: 613 VLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRK 672
Query: 200 --LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXX 373
LA +ADD + YSS + A+ LQ L W ++W + +NP K+ F
Sbjct: 673 ALLATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCFTLKTLS 732
Query: 374 XXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 553
+T PI L + + KYLG+TLD +TF PH+K+ R + +L
Sbjct: 733 P---------VTAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLR 783
Query: 554 PMICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAHAGRTHIDTLQSLQSRFCRLTVGAPW 733
++ ++S M+LR K +Y C+ + Y ++ A +++ + +Q LQ+R R P+
Sbjct: 784 WLLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPY 843
Query: 734 FVRNVDLHXDLGLESFXKYXXSGLXXYFDK 823
+VR LH DL L + + Y D+
Sbjct: 844 YVRGTTLHRDLNLHTVEEQISRHTSRYSDR 873
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 85.4 bits (202), Expect = 9e-17
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 18/273 (6%)
Frame = +2
Query: 17 VPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRS-- 187
+P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 206 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 265
Query: 188 ---------PPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDI 325
P H LA +ADDT + S+ L Q+ +W +KW I I
Sbjct: 266 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 325
Query: 326 NPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPH 505
N K+ +LF TPP+ + Q K +YLG+ LD +TF H
Sbjct: 326 NAKKTGHILFSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAH 377
Query: 506 IKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAH-AGRTHIDT 682
+ ++ + +L +I K S + K+ L+K + + YA ++ T
Sbjct: 378 MTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKK 437
Query: 683 LQSLQSRFCRLTVGAPWFVRNVDLHXDLGLESF 781
+Q++++++ R + A + R D+ ++SF
Sbjct: 438 IQTMENKYIRRIINASRYTRQADIRTKYNIKSF 470
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 85.4 bits (202), Expect = 9e-17
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 18/273 (6%)
Frame = +2
Query: 17 VPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRS-- 187
+P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 712
Query: 188 ---------PPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDI 325
P H LA +ADDT + S+ L Q+ +W +KW I I
Sbjct: 713 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 772
Query: 326 NPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPH 505
N K+ +LF TPP+ + Q K +YLG+ LD +TF H
Sbjct: 773 NAKKTGHILFSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAH 824
Query: 506 IKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAH-AGRTHIDT 682
+ ++ + +L +I K S + K+ L+K + + YA ++ T
Sbjct: 825 MTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKK 884
Query: 683 LQSLQSRFCRLTVGAPWFVRNVDLHXDLGLESF 781
+Q++++++ R + A + R D+ ++SF
Sbjct: 885 IQTMENKYIRRIINASRYTRQADIRTKYNIKSF 917
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 85.4 bits (202), Expect = 9e-17
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 18/273 (6%)
Frame = +2
Query: 17 VPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRS-- 187
+P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 712
Query: 188 ---------PPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDI 325
P H LA +ADDT + S+ L Q+ +W +KW I I
Sbjct: 713 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 772
Query: 326 NPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPH 505
N K+ +LF TPP+ + Q K +YLG+ LD +TF H
Sbjct: 773 NAKKTGHILFSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAH 824
Query: 506 IKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAH-AGRTHIDT 682
+ ++ + +L +I K S + K+ L+K + + YA ++ T
Sbjct: 825 MTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKK 884
Query: 683 LQSLQSRFCRLTVGAPWFVRNVDLHXDLGLESF 781
+Q++++++ R + A + R D+ ++SF
Sbjct: 885 IQTMENKYIRRIINASRYTRQADIRTKYNIKSF 917
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 85.4 bits (202), Expect = 9e-17
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 18/273 (6%)
Frame = +2
Query: 17 VPDSLVLIIRDFLSNRSFRYRVEG-TRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRS-- 187
+P L ++ ++LSNR+F R++G T S + AGVPQG +D+P
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDMPYPIV 712
Query: 188 ---------PPTH-----LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDI 325
P H LA +ADDT + S+ L Q+ +W +KW I I
Sbjct: 713 KDYMRNISFPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAI 772
Query: 326 NPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPH 505
N K+ +LF TPP+ + Q K +YLG+ LD +TF H
Sbjct: 773 NAKKTGHILFSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAH 824
Query: 506 IKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAH-AGRTHIDT 682
+ ++ + +L +I K S + K+ L+K + + YA ++ T
Sbjct: 825 MTLLKGKTIAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKK 884
Query: 683 LQSLQSRFCRLTVGAPWFVRNVDLHXDLGLESF 781
+Q++++++ R + A + R D+ ++SF
Sbjct: 885 IQTMENKYIRRIINASRYTRQADIRTKYNIKSF 917
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 76.6 bits (180), Expect = 4e-14
Identities = 64/276 (23%), Positives = 117/276 (42%), Gaps = 10/276 (3%)
Frame = +2
Query: 17 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 181
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 662 LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYI 721
Query: 182 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 349
R PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 722 YRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 781
Query: 350 LFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 529
+F + + + Q I K YLGVTLD+ +T H+ + +
Sbjct: 782 IFTLKNDLPTN--------SMNVKIKGQTIKKESKQSYLGVTLDSKLTLSSHVTKLLGKY 833
Query: 530 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAH-AGRTHIDTLQSLQSRF 706
+ +L ++ RSK+ + K+ + K+ + + YA + I +Q ++R
Sbjct: 834 STAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYAIAAWGPLVTDAQIRRVQVEENRK 893
Query: 707 CRLTVGAPWFVRNVDLHXDLGLESFXKYXXSGLXXY 814
R A + RN + G+++ ++ + +
Sbjct: 894 IRDICRAGRYTRNQTIRDLFGVKTVEEFYQQAMHRF 929
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 72.9 bits (171), Expect = 5e-13
Identities = 62/276 (22%), Positives = 115/276 (41%), Gaps = 10/276 (3%)
Frame = +2
Query: 17 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 181
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDMPLPYI 709
Query: 182 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 349
R PT L+ +ADDT V S + + ++ + W KW I +N AK+ V
Sbjct: 710 YRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGISVNAAKTGHV 769
Query: 350 LFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 529
+F + + Q I K YLGV LD+ +T H+ + +
Sbjct: 770 IFTLKNDLPTSLR--------TMKIKGQVIKIESKQSYLGVILDSKLTLSSHVTKLMGKY 821
Query: 530 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAH-AGRTHIDTLQSLQSRF 706
++ ++ +RSK+ + K+ + K+ + + YA + I +Q ++R
Sbjct: 822 TTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRK 881
Query: 707 CRLTVGAPWFVRNVDLHXDLGLESFXKYXXSGLXXY 814
R A + N + G+++ ++ L +
Sbjct: 882 MRDICRAGRYTSNQTIRDRYGIKTVEEFYQQALHRF 917
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 70.9 bits (166), Expect = 2e-12
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 9/217 (4%)
Frame = +2
Query: 17 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 181
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 534 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 593
Query: 182 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 349
PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 594 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 653
Query: 350 LFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 529
++ NL + + Q I K YLGV LD+ +T PH+ V +
Sbjct: 654 IYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKY 705
Query: 530 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYA 640
++ ++ +RSK+ K+ + K+ + + YA
Sbjct: 706 LTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 742
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 70.9 bits (166), Expect = 2e-12
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 9/217 (4%)
Frame = +2
Query: 17 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 181
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 709
Query: 182 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 349
PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 710 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 769
Query: 350 LFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 529
++ NL + + Q I K YLGV LD+ +T PH+ V +
Sbjct: 770 IYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKY 821
Query: 530 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYA 640
++ ++ +RSK+ K+ + K+ + + YA
Sbjct: 822 LTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 70.9 bits (166), Expect = 2e-12
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 9/217 (4%)
Frame = +2
Query: 17 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 181
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 709
Query: 182 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 349
PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 710 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 769
Query: 350 LFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 529
++ NL + + Q I K YLGV LD+ +T PH+ V +
Sbjct: 770 IYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKY 821
Query: 530 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYA 640
++ ++ +RSK+ K+ + K+ + + YA
Sbjct: 822 LTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 70.9 bits (166), Expect = 2e-12
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 9/217 (4%)
Frame = +2
Query: 17 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 181
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 612 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 671
Query: 182 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 349
PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 672 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 731
Query: 350 LFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 529
++ NL + + Q I K YLGV LD+ +T PH+ V +
Sbjct: 732 IYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKY 783
Query: 530 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYA 640
++ ++ +RSK+ K+ + K+ + + YA
Sbjct: 784 LTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 820
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 70.9 bits (166), Expect = 2e-12
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 9/217 (4%)
Frame = +2
Query: 17 VPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIP---- 181
+P +L +I+ +L+NR+F + + G S + AGVPQG +D+P
Sbjct: 650 LPYNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDMPLPHI 709
Query: 182 -RSPPTH---LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 349
PT L+ +ADDT V S + + ++ W KW I +N AK+ V
Sbjct: 710 YHPSPTERIMLSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHV 769
Query: 350 LFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 529
++ NL + + Q I K YLGV LD+ +T PH+ V +
Sbjct: 770 IYTLKNDIPT-------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKY 821
Query: 530 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYA 640
++ ++ +RSK+ K+ + K+ + + YA
Sbjct: 822 LTAYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 60.9 bits (141), Expect = 2e-09
Identities = 49/229 (21%), Positives = 93/229 (40%), Gaps = 4/229 (1%)
Frame = +2
Query: 14 GVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDI----P 181
G+ L +I+ F++NRSFR R+ S+ L G+PQG DI
Sbjct: 605 GIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLSVVLFMIAIEDINDIVT 664
Query: 182 RSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQX 361
R +++L+ADD ++ +N + + +K + W A S A L
Sbjct: 665 RHKDIYISLYADDAIIFTKIKNINTVREKFLEILQEINSW---------GATSGASLAIE 715
Query: 362 XXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 541
NL+ I + I +K LG+T D + F+ H +++R +
Sbjct: 716 KCQTLHICRKQRCNLS-DIVFNSRTIKDVNFLKILGITFDPKLLFKQHCQTLRKQLETRF 774
Query: 542 GRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAHAGRTHIDTLQ 688
+ + K S + ++ + + + + + + Y +F ++H+ LQ
Sbjct: 775 NIIKFLSSKYSYIHIKTLIDITRALMLSKIDYGLPIFGWCAKSHLKKLQ 823
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 44.0 bits (99), Expect = 3e-04
Identities = 36/184 (19%), Positives = 76/184 (41%), Gaps = 2/184 (1%)
Frame = +2
Query: 107 PLTAGVPQGXXXXXXXXXXXXNDIPR--SPPTHLALFADDTTVYYSSRNKSLIAKKLQSA 280
P+T G PQG + + + P L+ +ADD + +++++ +K
Sbjct: 627 PVTRGCPQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNSRAVLEEKGAQL 686
Query: 281 ALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVK 460
+ W + ++ +K+ +L + P + + +P+ R +
Sbjct: 687 MSIVETWGAEVGDCLSTSKTVIMLLKGALRR-----------APTVRFAGRNLPYVRSCR 735
Query: 461 YLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYA 640
YLG+T+ M F HI S+R R ++G L ++ S R + T+Y + + +
Sbjct: 736 YLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPRARRTIYDGLMAPCVLFG 795
Query: 641 SVVF 652
+ V+
Sbjct: 796 APVW 799
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 42.7 bits (96), Expect = 6e-04
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +2
Query: 17 VPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPT 196
+P ++ +++ +L R F R + SS + AGVPQG DIP +
Sbjct: 142 LPQNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIPTNYQL 201
Query: 197 HLALFADDTTVYYSSR 244
+ FADDT + SR
Sbjct: 202 TIFTFADDTAIISRSR 217
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 42.7 bits (96), Expect = 6e-04
Identities = 55/238 (23%), Positives = 97/238 (40%), Gaps = 9/238 (3%)
Frame = +2
Query: 8 NMGVPDSLVLIIRDFLSNRSFRYRVE-GTRSSPRPLTAGVPQGXXXXXXXXXXXXN---D 175
N+GVPD + +I ++ +R Y E G RS ++AGVPQG +
Sbjct: 576 NLGVPDYIRGVIGNYFRDRVLWYVTEDGPRS--HQVSAGVPQGSVLGPILWNIMYDGILS 633
Query: 176 IPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLF 355
I + L FADD + ++ + A A +W K + I K+ VL
Sbjct: 634 ISKPRGVELHCFADDVAITAVAKTIPELQDISNVAITAAIEWLEKVGLKIAAHKTEVVLL 693
Query: 356 QXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAF 535
+ + I A +KYLGV +D ++F+ H + +AA
Sbjct: 694 SSRKSVECMR----------VEVKGVEIASAETLKYLGVLIDRRLSFKAHARYASKKAAM 743
Query: 536 ---ILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYASVVFA--HAGRTHIDTLQSL 694
L R+ P + + R V + K A + YA+ +++ +T++D+ +++
Sbjct: 744 TAAALARIMPNVGGPRLPARRLLVAVSK----ATLLYAAPIWSCVSTKKTYLDSARAV 797
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 39.5 bits (88), Expect = 0.006
Identities = 46/237 (19%), Positives = 90/237 (37%), Gaps = 4/237 (1%)
Frame = +2
Query: 29 LVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLAL 208
++ I++F+SNR RV SSP PL G+PQG N + H +
Sbjct: 602 IIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSPISVILFLIAFNKLSNIISLHKEI 661
Query: 209 ----FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXX 376
+ADD + + + L + + W ++ +K +
Sbjct: 662 KFNAYADDFFLIINFNKNTNTNFNLDNLFDDIENWCSYSGASLSLSKCQHL--------- 712
Query: 377 XXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYP 556
+ T I+ IP +K LG+TL+ + HI + + L +
Sbjct: 713 --HICRKRHCTCKISCNNFQIPSVTSLKILGITLNNKYKWNTHINLLLPKLHNKLNIIKC 770
Query: 557 MICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAHAGRTHIDTLQSLQSRFCRLTVGA 727
+ + + + + K I A + Y ++ HA ++ ++ +++ + RL +GA
Sbjct: 771 LSSLKFNCNTHTLLNVAKATIIAKLEYGLFLYGHAPKSILNKIKTPFNSAIRLALGA 827
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 38.3 bits (85), Expect = 0.014
Identities = 26/129 (20%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Frame = +2
Query: 431 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 610
Q I K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ + K
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 63
Query: 611 TCIRAVMTYASVVFAH-AGRTHIDTLQSLQSRFCRLTVGAPWFVRNVDLHXDLGLESFXK 787
+ + + YA + I +Q ++R R A + N + G+++ +
Sbjct: 64 SVLSPIWQYAIAAWGPLVTDAQIRRIQVEENRKMRDICRAGRYTSNQTIRDRYGIKTVEE 123
Query: 788 YXXSGLXXY 814
+ L +
Sbjct: 124 FYQQALHRF 132
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,879,487
Number of Sequences: 53049
Number of extensions: 870437
Number of successful extensions: 2166
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2147
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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