Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_C13
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 78 7e-15
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 48 7e-06
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 46 3e-05
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 36 0.029
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 36 0.038
AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical ... 29 3.3
AF039044-12|AAG24130.2| 405|Caenorhabditis elegans Hypothetical... 29 4.4
AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical ... 29 4.4
AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical ... 29 4.4
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 78.2 bits (184), Expect = 7e-15
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 2/231 (0%)
Frame = +2
Query: 26 SLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLA 205
+L++ + +FLSNRSFR R+ T SS + T GVPQG NDI P +A
Sbjct: 45 NLLIWVNEFLSNRSFRVRIGQTLSSRKFATCGVPQGAVLSPLLFGIYVNDISSILPEKVA 104
Query: 206 L--FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 379
FADDT + Y+S K+ LQSA A+ W + ++ +N +K+ V
Sbjct: 105 CKQFADDTKL-YASTPKTESENNLQSALDAVVDWTKGSKLTLNQSKTVHV---------- 153
Query: 380 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 559
+ L PI + LG + + F H + + A F L ++
Sbjct: 154 --TVGKRRIDFKYHLDGYPIERKAITRDLGFLISEKLDFSDHWRKCINLAKFQLANMFN- 210
Query: 560 ICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAHAGRTHIDTLQSLQSRFCR 712
K S + + + LYKT IR + Y +VV + ++ T++S+Q+ F R
Sbjct: 211 --KYSTSNKKLMILLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 48.4 bits (110), Expect = 7e-06
Identities = 38/165 (23%), Positives = 63/165 (38%)
Frame = +2
Query: 14 GVPDSLVLIIRDFLSNRSFRYRVEGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPP 193
G+ + L + ++L R R + S L GVPQG D+P
Sbjct: 497 GIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQD 556
Query: 194 THLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXX 373
T L +ADD ++ + A+K+Q + ++ ++ + I+ KST +F
Sbjct: 557 TMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISAEKSTVTVFS----- 611
Query: 374 XXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHI 508
P I PIP K LG+TL+ + H+
Sbjct: 612 ---CDPKEHKTKPDIYWMDDPIPVINAPKLLGITLNTMTGTKDHV 653
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 46.4 bits (105), Expect = 3e-05
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 3/207 (1%)
Frame = +2
Query: 44 RDFLSNRSFRYRVEGTRS-SPRPLTAGVPQGXXXXXXXXXXXXND--IPRSPPTHLALFA 214
++FL NR+F ++ S + P+++GVPQG N+ I +P +++ FA
Sbjct: 854 KEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINNLLIDLAPTINISCFA 913
Query: 215 DDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXX 394
DD ++++ + ++I Q++ + W + + + P KS +
Sbjct: 914 DDVKIFHT--DPTII----QNSIDIIVSWSKLNELPLAPTKSALLAL------------G 955
Query: 395 XXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 574
N ++ PI + V+ LG+ D + F HI V + + R ++ S
Sbjct: 956 TRNKNQSYSVDGVPITPSSTVRDLGLITDCKLKFEHHIVKV---SCLAMLRSKQILKAFS 1012
Query: 575 KMSLRNKVTLYKTCIRAVMTYASVVFA 655
S + LYKT + +M Y S V+A
Sbjct: 1013 SNSPKFYAHLYKTYVAPIMNYCSEVYA 1039
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 36.3 bits (80), Expect = 0.029
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = +2
Query: 434 PIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKT 613
PI + + LG+ D+ +TF+PHIK + + L R ++ + L+KT
Sbjct: 188 PISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKT 244
Query: 614 CIRAVMTYASVVFAHAGRTHIDTL 685
I ++ Y S V++ + + TL
Sbjct: 245 YILPLIEYGSAVYSPKPSSSLSTL 268
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 35.9 bits (79), Expect = 0.038
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -1
Query: 177 ISLTNKLNRRGERTEPCGTPAVRGRGEER 91
ISLTN GERT+PCGTP G E+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>AF038604-1|AAB92011.4| 436|Caenorhabditis elegans Hypothetical
protein B0546.2 protein.
Length = 436
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 30 SCSSYGTSCRTALFDIESREPAPPHDLSQLESRKALSSHPSYLAYSSTIFP 182
SCSS +S +A I S+E PP L + S++ S + SS + P
Sbjct: 37 SCSSSASSSSSAAKRIRSQEDGPPSKRWVLSASSTSSTNKSPIPSSSPVLP 87
>AF039044-12|AAG24130.2| 405|Caenorhabditis elegans Hypothetical
protein F48G7.11 protein.
Length = 405
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 524 RAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRAVMTYASVVFAHAGRTHIDTLQSLQSR 703
RA + M+C+R SL++++ K C R M Y + + + +T D + S SR
Sbjct: 37 RAVMRSAKSQDMVCERESCSLKDRIQCCKIC-RLKMCYDAGMDPNKFQTGRDLISS-SSR 94
Query: 704 FCRL-TVGAPWFVRN 745
L +VG+P + N
Sbjct: 95 SSNLSSVGSPQSLAN 109
>AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical
protein F18A12.8b protein.
Length = 816
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 170 NDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPA 334
ND+P+ +L L D+ YY KS++ + + L + F K DI+PA
Sbjct: 585 NDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQ-KLTKPFDKHEFDISPA 638
>AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical
protein F18A12.8a protein.
Length = 848
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 170 NDIPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPA 334
ND+P+ +L L D+ YY KS++ + + L + F K DI+PA
Sbjct: 585 NDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQ-KLTKPFDKHEFDISPA 638
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,190,257
Number of Sequences: 27780
Number of extensions: 412905
Number of successful extensions: 1051
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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