Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_C03
(865 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 129 6e-30
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 129 6e-30
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 99 9e-21
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 89 1e-17
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 88 1e-17
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 88 2e-17
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 88 2e-17
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 77 3e-14
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 77 3e-14
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 64 2e-10
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 60 3e-09
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 58 2e-08
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 58 2e-08
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 58 2e-08
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 58 2e-08
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 58 2e-08
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 56 5e-08
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 56 5e-08
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 56 5e-08
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 56 5e-08
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 43 5e-04
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 40 0.006
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 38 0.018
AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p pro... 35 0.17
AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-P... 35 0.17
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 34 0.29
AY122108-1|AAM52620.1| 593|Drosophila melanogaster GH12004p pro... 33 0.51
AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-P... 33 0.51
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 33 0.67
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 32 0.89
BT003186-1|AAO24941.1| 756|Drosophila melanogaster RE65015p pro... 32 1.2
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 32 1.2
BT004847-1|AAO45203.1| 955|Drosophila melanogaster RE70412p pro... 31 1.5
AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p pro... 31 1.5
AE014298-2109|AAF48429.2| 955|Drosophila melanogaster CG9095-PA... 31 1.5
AE014296-3678|AAF51833.3| 583|Drosophila melanogaster CG12377-P... 31 1.5
AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA... 31 1.5
BT010037-1|AAQ22506.1| 409|Drosophila melanogaster LD43171p pro... 31 2.7
AE014298-2534|AAN09435.1| 409|Drosophila melanogaster CG32564-P... 31 2.7
AY128472-1|AAM75065.1| 836|Drosophila melanogaster RE28238p pro... 30 3.6
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 30 3.6
AE014134-2320|AAN10833.1| 836|Drosophila melanogaster CG6043-PC... 30 3.6
AE014134-2318|AAN10831.1| 759|Drosophila melanogaster CG6043-PB... 30 3.6
AE014134-2317|AAF53274.2| 759|Drosophila melanogaster CG6043-PA... 30 3.6
AE014134-2316|AAN10830.1| 918|Drosophila melanogaster CG6043-PD... 30 3.6
AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-P... 29 8.3
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 129 bits (311), Expect = 6e-30
Identities = 62/201 (30%), Positives = 113/201 (56%)
Frame = +1
Query: 133 LFSLYINDILRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINP 312
LF+++ +DI ++ L+LFADD A+Y + + +++ +Q+ + +++KW+I INP
Sbjct: 676 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 735
Query: 313 TKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSR 492
K+ A+ F + R P LP R++ + D PI W ++YLG+ D +
Sbjct: 736 NKTNAIFFTKRRKPRY-----LPDRQLR----------ILDSPIQWVDNIRYLGIIFDKK 780
Query: 493 MTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXR 672
+TF+ HI + I+ LYP+I R+SK+S+ NK+ ++KT P++ Y S V+ +
Sbjct: 781 LTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQ 840
Query: 673 IHLKSFQIIQSRFCRIXVGAP 735
H+K QI Q++ ++ + P
Sbjct: 841 THIKKLQICQNKLLKLIMNLP 861
Score = 37.9 bits (84), Expect = 0.018
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 9 LVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 128
L+ I++++L++R F + ++S R + AGVPQGS L P
Sbjct: 635 LIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGP 674
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 129 bits (311), Expect = 6e-30
Identities = 62/201 (30%), Positives = 113/201 (56%)
Frame = +1
Query: 133 LFSLYINDILRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINP 312
LF+++ +DI ++ L+LFADD A+Y + + +++ +Q+ + +++KW+I INP
Sbjct: 624 LFNIFTHDIPQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINP 683
Query: 313 TKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSR 492
K+ A+ F + R P LP R++ + D PI W ++YLG+ D +
Sbjct: 684 NKTNAIFFTKRRKPRY-----LPDRQLR----------ILDSPIQWVDNIRYLGIIFDKK 728
Query: 493 MTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXR 672
+TF+ HI + I+ LYP+I R+SK+S+ NK+ ++KT P++ Y S V+ +
Sbjct: 729 LTFKYHINNTIMKVNKIICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQ 788
Query: 673 IHLKSFQIIQSRFCRIXVGAP 735
H+K QI Q++ ++ + P
Sbjct: 789 THIKKLQICQNKLLKLIMNLP 809
Score = 37.9 bits (84), Expect = 0.018
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3
Query: 9 LVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 128
L+ I++++L++R F + ++S R + AGVPQGS L P
Sbjct: 583 LIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGP 622
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 98.7 bits (235), Expect = 9e-21
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 7/207 (3%)
Frame = +1
Query: 130 LLFSLYINDILRSP-----ETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKW 294
LL+ LY +D+ + ++ LA FADD + Y R + +Q A +W R+W
Sbjct: 649 LLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRW 708
Query: 295 RIDINPTKSTAVLF--KRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKY 468
I IN +KS V F KR PP P+ + + P+P KY
Sbjct: 709 NIGINSSKSNNVCFTLKRRTPP---------------------PVYIEEVPVPQPNAAKY 747
Query: 469 LGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYAS 648
LGV LD R+TF H+ +R R + + Y ++ RSK+SL NK+T+YK + P Y
Sbjct: 748 LGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGC 807
Query: 649 VVFAHAXRIHLKSFQIIQSRFCRIXVG 729
++ A H+K Q IQ++ R+ G
Sbjct: 808 QIWGLACDSHIKRIQAIQNKVARLITG 834
Score = 36.3 bits (80), Expect = 0.054
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 18 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 128
+++ YL R F R S +V AGVPQGS L P
Sbjct: 612 LLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGP 648
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 88.6 bits (210), Expect = 1e-17
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 1/207 (0%)
Frame = +1
Query: 133 LFSLYINDILRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINP 312
L+ +Y DI + ++ FADDTAI R +L + +W WRI +N
Sbjct: 648 LYLIYTADIPTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNE 707
Query: 313 TKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSR 492
K V F TL+ R + P P+ + P+P A +V YLGV LD R
Sbjct: 708 QKCKHVTF--------TLN------RQDCP-----PLLLNSIPLPKADEVTYLGVHLDRR 748
Query: 493 MTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXR 672
+T+R HI+ + + L+ +I S +SL +KV LY + ++P+ TY S ++ +A
Sbjct: 749 LTWRRHIEAKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASN 808
Query: 673 IHLKSFQIIQSRFCRIXVGAP-VVRQE 750
++ Q QS+ R GAP VR E
Sbjct: 809 SNIDIIQRAQSKILRTITGAPWYVRSE 835
Score = 36.7 bits (81), Expect = 0.041
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 18 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQFVYQRYTPVS 170
+++ YL +R F R S + AGVPQGS L P T+ +Y P +
Sbjct: 610 LLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGP-TLYLIYTADIPTN 659
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 88.2 bits (209), Expect = 1e-17
Identities = 58/185 (31%), Positives = 87/185 (47%)
Frame = +1
Query: 181 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 360
LA +ADD A+ YS R LQ TT+ W ++W + +NP K+ F
Sbjct: 675 LATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCF-------- 726
Query: 361 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 540
TL P AP + DQP + KYLG+TLD R+TF PH+K R
Sbjct: 727 TLKTLSPV-----TAPIELEGVILDQP----SQAKYLGITLDKRLTFGPHLKATTRRCYQ 777
Query: 541 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQSRFCRI 720
+ +L ++ R+S M+LR K +Y C+ P+ Y ++ A + + Q++Q+R R
Sbjct: 778 RMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRA 837
Query: 721 XVGAP 735
P
Sbjct: 838 ITDCP 842
Score = 41.1 bits (92), Expect = 0.002
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +3
Query: 18 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 128
+++ YL +R F RV + S PR + AGVPQGS L P
Sbjct: 613 VLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGP 649
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 87.8 bits (208), Expect = 2e-17
Identities = 65/202 (32%), Positives = 93/202 (46%)
Frame = +1
Query: 130 LLFSLYINDILRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDIN 309
+L++LY D + FADDTAI + L T++ +W WRI IN
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISIN 704
Query: 310 PTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDS 489
K V F TL+ P P+ + + IP A +V YLGV LD
Sbjct: 705 VQKCKQVTF--------TLN--------KQTCP---PLVLNNICIPQADEVTYLGVHLDR 745
Query: 490 RMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAX 669
R+T+R HI+ L+ +I RS +SL K LY + ++P+ TY S ++ +A
Sbjct: 746 RLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNAS 805
Query: 670 RIHLKSFQIIQSRFCRIXVGAP 735
R ++ Q QSR RI GAP
Sbjct: 806 RSNIDIIQRAQSRILRIITGAP 827
Score = 37.9 bits (84), Expect = 0.018
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 18 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 128
+++ YL NR F R + + SR + AGVPQGS L P
Sbjct: 608 LLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGP 644
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 87.8 bits (208), Expect = 2e-17
Identities = 65/202 (32%), Positives = 93/202 (46%)
Frame = +1
Query: 130 LLFSLYINDILRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDIN 309
+L++LY D + FADDTAI + L T++ +W WRI IN
Sbjct: 645 ILYTLYTADFPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISIN 704
Query: 310 PTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDS 489
K V F TL+ P P+ + + IP A +V YLGV LD
Sbjct: 705 VQKCKQVTF--------TLN--------KQTCP---PLVLNNICIPQADEVTYLGVHLDR 745
Query: 490 RMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAX 669
R+T+R HI+ L+ +I RS +SL K LY + ++P+ TY S ++ +A
Sbjct: 746 RLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNAS 805
Query: 670 RIHLKSFQIIQSRFCRIXVGAP 735
R ++ Q QSR RI GAP
Sbjct: 806 RSNIDIIQRAQSRILRIITGAP 827
Score = 35.5 bits (78), Expect = 0.095
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 18 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 128
+++ YL N F R + + SR + AGVPQGS L P
Sbjct: 608 LLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGP 644
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 77.0 bits (181), Expect = 3e-14
Identities = 54/185 (29%), Positives = 83/185 (44%)
Frame = +1
Query: 181 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 360
+A +ADDTA+ + LQ QW W + IN K V F N
Sbjct: 676 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFA-----NR 730
Query: 361 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 540
T S P +++ + I KYLG+TLD ++TF HI ++
Sbjct: 731 TGSCP--------------GVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRT 776
Query: 541 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQSRFCRI 720
+ R+ +I R+K+SL KV +YK+ + P + Y V+ A + HL +I+Q++ R
Sbjct: 777 KVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRR 836
Query: 721 XVGAP 735
GAP
Sbjct: 837 ISGAP 841
Score = 42.7 bits (96), Expect = 6e-04
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +3
Query: 6 RLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQFVYQRYTP 164
+L L+++ +L R+F V+G +S + + AGVPQGS L P T+ V+ P
Sbjct: 610 QLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGP-TLYSVFASDMP 661
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 77.0 bits (181), Expect = 3e-14
Identities = 54/185 (29%), Positives = 83/185 (44%)
Frame = +1
Query: 181 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 360
+A +ADDTA+ + LQ QW W + IN K V F N
Sbjct: 478 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFA-----NR 532
Query: 361 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 540
T S P +++ + I KYLG+TLD ++TF HI ++
Sbjct: 533 TGSCP--------------GVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRT 578
Query: 541 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAXRIHLKSFQIIQSRFCRI 720
+ R+ +I R+K+SL KV +YK+ + P + Y V+ A + HL +I+Q++ R
Sbjct: 579 KVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLRR 638
Query: 721 XVGAP 735
GAP
Sbjct: 639 ISGAP 643
Score = 42.7 bits (96), Expect = 6e-04
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +3
Query: 6 RLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQFVYQRYTP 164
+L L+++ +L R+F V+G +S + + AGVPQGS L P T+ V+ P
Sbjct: 412 QLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGP-TLYSVFASDMP 463
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 64.5 bits (150), Expect = 2e-10
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Frame = +1
Query: 130 LLFSLYIND-----ILRSPETH---LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWF 285
LL+S++ +D I R T L+ +ADDT + S R + T W
Sbjct: 707 LLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNENYLKTFSDWA 766
Query: 286 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVK 465
KW I +N K+ V+F TL LPT +N + + Q I K
Sbjct: 767 DKWGISVNAAKTGHVIF--------TLKNDLPTNSMN--------VKIKGQTIKKESKQS 810
Query: 466 YLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 645
YLGVTLDS++T H+ + + + +L ++ RSK+ + K+ + K+ + P+ YA
Sbjct: 811 YLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTKILILKSVLSPIWQYA 870
Score = 39.5 bits (88), Expect = 0.006
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 3 WRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 128
+ L +I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 664 YNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGP 706
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 60.5 bits (140), Expect = 3e-09
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Frame = +1
Query: 130 LLFSLYIND-----ILRSPETH---LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWF 285
LL+S++ +D I R T L+ +ADDT + S R + + W
Sbjct: 695 LLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNENYLKSFSDWA 754
Query: 286 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVK 465
KW I +N K+ V+F TL LPT ++R + + Q I K
Sbjct: 755 DKWGISVNAAKTGHVIF--------TLKNDLPT--------SLRTMKIKGQVIKIESKQS 798
Query: 466 YLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 645
YLGV LDS++T H+ + + ++ ++ RRSK+ + K+ + K+ + P+ YA
Sbjct: 799 YLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILKSVLSPIWQYA 858
Score = 39.5 bits (88), Expect = 0.006
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 3 WRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 128
+ L +I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGP 694
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 58.0 bits (134), Expect = 2e-08
Identities = 41/155 (26%), Positives = 68/155 (43%)
Frame = +1
Query: 181 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 360
L+ +ADDT + S R + T W KW I +N K+ V++
Sbjct: 604 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY-------- 655
Query: 361 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 540
TL +PT ++ + + Q I K YLGV LDS++T PH+ V +
Sbjct: 656 TLKNDIPTN--------LKTMKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLT 707
Query: 541 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 645
++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 708 AYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 742
Score = 39.5 bits (88), Expect = 0.006
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 3 WRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 128
+ L +I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 536 YNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 578
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.0 bits (134), Expect = 2e-08
Identities = 41/155 (26%), Positives = 68/155 (43%)
Frame = +1
Query: 181 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 360
L+ +ADDT + S R + T W KW I +N K+ V++
Sbjct: 720 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY-------- 771
Query: 361 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 540
TL +PT ++ + + Q I K YLGV LDS++T PH+ V +
Sbjct: 772 TLKNDIPTN--------LKTMKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLT 823
Query: 541 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 645
++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 824 AYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
Score = 39.5 bits (88), Expect = 0.006
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 3 WRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 128
+ L +I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 694
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.0 bits (134), Expect = 2e-08
Identities = 41/155 (26%), Positives = 68/155 (43%)
Frame = +1
Query: 181 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 360
L+ +ADDT + S R + T W KW I +N K+ V++
Sbjct: 720 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY-------- 771
Query: 361 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 540
TL +PT ++ + + Q I K YLGV LDS++T PH+ V +
Sbjct: 772 TLKNDIPTN--------LKTMKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLT 823
Query: 541 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 645
++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 824 AYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
Score = 39.5 bits (88), Expect = 0.006
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 3 WRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 128
+ L +I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 694
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 58.0 bits (134), Expect = 2e-08
Identities = 41/155 (26%), Positives = 68/155 (43%)
Frame = +1
Query: 181 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 360
L+ +ADDT + S R + T W KW I +N K+ V++
Sbjct: 682 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY-------- 733
Query: 361 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 540
TL +PT ++ + + Q I K YLGV LDS++T PH+ V +
Sbjct: 734 TLKNDIPTN--------LKTMKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLT 785
Query: 541 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 645
++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 786 AYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 820
Score = 39.5 bits (88), Expect = 0.006
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 3 WRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 128
+ L +I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 614 YNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 656
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.0 bits (134), Expect = 2e-08
Identities = 41/155 (26%), Positives = 68/155 (43%)
Frame = +1
Query: 181 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 360
L+ +ADDT + S R + T W KW I +N K+ V++
Sbjct: 720 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIY-------- 771
Query: 361 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 540
TL +PT ++ + + Q I K YLGV LDS++T PH+ V +
Sbjct: 772 TLKNDIPTN--------LKTMKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLT 823
Query: 541 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYA 645
++ ++ RSK+ K+ + K+ + P+ YA
Sbjct: 824 AYRKMSWILNERSKLPTNTKMLILKSVLSPIWQYA 858
Score = 39.5 bits (88), Expect = 0.006
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +3
Query: 3 WRLVLIIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSP 128
+ L +I+ YL+NR+F + + G SR + AGVPQGS L P
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGP 694
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 56.4 bits (130), Expect = 5e-08
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 1/185 (0%)
Frame = +1
Query: 181 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 360
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 284 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 343
Query: 361 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 540
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 344 IYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGKTIA 387
Query: 541 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCR 717
+L +I + S + K+ L+K + P+ YA ++ K Q +++++ R
Sbjct: 388 AYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 447
Query: 718 IXVGA 732
+ A
Sbjct: 448 RIINA 452
Score = 43.6 bits (98), Expect = 4e-04
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 18 IIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSP 128
++ +YLSNR+F R++G T SR ++ AGVPQGS L P
Sbjct: 213 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGP 250
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 56.4 bits (130), Expect = 5e-08
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 1/185 (0%)
Frame = +1
Query: 181 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 360
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Query: 361 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 540
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 791 IYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGKTIA 834
Query: 541 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCR 717
+L +I + S + K+ L+K + P+ YA ++ K Q +++++ R
Sbjct: 835 AYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 894
Query: 718 IXVGA 732
+ A
Sbjct: 895 RIINA 899
Score = 43.6 bits (98), Expect = 4e-04
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 18 IIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSP 128
++ +YLSNR+F R++G T SR ++ AGVPQGS L P
Sbjct: 660 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGP 697
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 56.4 bits (130), Expect = 5e-08
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 1/185 (0%)
Frame = +1
Query: 181 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 360
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Query: 361 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 540
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 791 IYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGKTIA 834
Query: 541 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCR 717
+L +I + S + K+ L+K + P+ YA ++ K Q +++++ R
Sbjct: 835 AYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 894
Query: 718 IXVGA 732
+ A
Sbjct: 895 RIINA 899
Score = 43.6 bits (98), Expect = 4e-04
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 18 IIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSP 128
++ +YLSNR+F R++G T SR ++ AGVPQGS L P
Sbjct: 660 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGP 697
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 56.4 bits (130), Expect = 5e-08
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 1/185 (0%)
Frame = +1
Query: 181 LALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNT 360
LA +ADDT I + L Q +W +KW I IN K+ +LF +
Sbjct: 731 LATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHILFSLKKEQTN 790
Query: 361 TLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAF 540
+ PL +N A K +YLG+ LD R+TF H+ ++ +
Sbjct: 791 IYTPPL----INGQRAAK------------LNKQRYLGLMLDRRLTFCAHMTLLKGKTIA 834
Query: 541 ILGRLYPMICRRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AXRIHLKSFQIIQSRFCR 717
+L +I + S + K+ L+K + P+ YA ++ K Q +++++ R
Sbjct: 835 AYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 894
Query: 718 IXVGA 732
+ A
Sbjct: 895 RIINA 899
Score = 43.6 bits (98), Expect = 4e-04
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 18 IIRDYLSNRSFRYRVEG-TRSRPRHVTAGVPQGSALSP 128
++ +YLSNR+F R++G T SR ++ AGVPQGS L P
Sbjct: 660 LLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGP 697
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 43.2 bits (97), Expect = 5e-04
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +1
Query: 436 QPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSKMSLRNKVTLYK 615
Q I K YLGV LDS++T H+ + + ++ ++ RRSK+ + K+ + K
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 63
Query: 616 TCIRPVMTYA 645
+ + P+ YA
Sbjct: 64 SVLSPIWQYA 73
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 39.5 bits (88), Expect = 0.006
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +1
Query: 403 APAVRPITMFDQPIPWAPKVKYLGVTLDSRMTFRPHIKTVRDRAAFILGRLYPMICRRSK 582
AP VR + +P+ +YLG+T+ M F HI ++R R ++G L ++
Sbjct: 718 APTVR---FAGRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWG 774
Query: 583 MSLRNKVTLYKTCIRPVMTYASVVF 657
S R + T+Y + P + + + V+
Sbjct: 775 FSPRARRTIYDGLMAPCVLFGAPVW 799
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 37.9 bits (84), Expect = 0.018
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +3
Query: 6 RLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALS 125
RL +I+ +++NRSFR R+ S + G+PQGS LS
Sbjct: 609 RLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLS 648
>AY069838-1|AAL39983.1| 555|Drosophila melanogaster SD08447p
protein.
Length = 555
Score = 34.7 bits (76), Expect = 0.17
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 225 EEGVASSTTSDRGYHHGTVVPEVAHRHQPHEKH 323
EEGV+ T S +HH + H HQPH H
Sbjct: 203 EEGVSDDTVSQHHHHHHHGHHQQEHHHQPHHHH 235
>AE014298-1054|AAF46269.1| 555|Drosophila melanogaster CG12155-PA
protein.
Length = 555
Score = 34.7 bits (76), Expect = 0.17
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 225 EEGVASSTTSDRGYHHGTVVPEVAHRHQPHEKH 323
EEGV+ T S +HH + H HQPH H
Sbjct: 203 EEGVSDDTVSQHHHHHHHGHHQQEHHHQPHHHH 235
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 33.9 bits (74), Expect = 0.29
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 18 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSP 128
+++ YL R F R + S + AGVPQGS L P
Sbjct: 149 LLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGP 185
>AY122108-1|AAM52620.1| 593|Drosophila melanogaster GH12004p
protein.
Length = 593
Score = 33.1 bits (72), Expect = 0.51
Identities = 22/65 (33%), Positives = 29/65 (44%)
Frame = +1
Query: 1 SGDSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYINDILRSPETH 180
S +S+ T+ T S S + P+TS P A PSP L F L++ L
Sbjct: 51 SWSGITSFSTSTSTTSSTSTSVAALAAPLTSGPGDSSATPSPSLSFILFVCIDLLFILLF 110
Query: 181 LALFA 195
ALFA
Sbjct: 111 FALFA 115
>AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-PA
protein.
Length = 1424
Score = 33.1 bits (72), Expect = 0.51
Identities = 22/65 (33%), Positives = 29/65 (44%)
Frame = +1
Query: 1 SGDSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYINDILRSPETH 180
S +S+ T+ T S S + P+TS P A PSP L F L++ L
Sbjct: 882 SWSGITSFSTSTSTTSSTSTSVAALAAPLTSGPGDSSATPSPSLSFILFVCIDLLFILLF 941
Query: 181 LALFA 195
ALFA
Sbjct: 942 FALFA 946
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 32.7 bits (71), Expect = 0.67
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 9 LVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSPXTIQFVY 149
LV IR Y SNR E + RH VT GVPQGS L P +Y
Sbjct: 21 LVRFIRSYSSNRVLP--CESSEGVFRHQVTGGVPQGSVLGPLLWNTMY 66
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 32.3 bits (70), Expect = 0.89
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 6 RLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALS 125
+++ I++++SNR RV S P + G+PQGS +S
Sbjct: 601 KIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSPIS 640
>BT003186-1|AAO24941.1| 756|Drosophila melanogaster RE65015p
protein.
Length = 756
Score = 31.9 bits (69), Expect = 1.2
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +2
Query: 386 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 544
GAS PPPP Q + +P G R ++ SP+T +PT +R+ P F
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSVPGSPATA--RKSPTPQRFEPPPLGF 169
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 31.9 bits (69), Expect = 1.2
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 18 IIRDYLSNRSFRYRVE-GTRSRPRHVTAGVPQGSALSPXTIQFVYQRYTPVS 170
+I +Y +R Y E G RS V+AGVPQGS L P +Y +S
Sbjct: 586 VIGNYFRDRVLWYVTEDGPRSH--QVSAGVPQGSVLGPILWNIMYDGILSIS 635
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 451 APKVKYLGVTLDSRMTFRPHIKTVRDRAAF---ILGRLYPMI 567
A +KYLGV +D R++F+ H + +AA L R+ P +
Sbjct: 714 AETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
>BT004847-1|AAO45203.1| 955|Drosophila melanogaster RE70412p
protein.
Length = 955
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 359 PR*ASPSRLGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPP 538
P AS + +S+ PPPF S++ R P R + + S +G S T Y ++ P
Sbjct: 564 PTAASTIPVPSSVATPPPFRPKVVSSTTSRTPYRPAVSTASSGIGGSSTSTVGTYPSLSP 623
Query: 539 S 541
+
Sbjct: 624 T 624
>AY119084-1|AAM50944.1| 543|Drosophila melanogaster LP10938p
protein.
Length = 543
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -2
Query: 633 DGAYASFVECHLISKG-HFTSPTYHRVET 550
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
>AE014298-2109|AAF48429.2| 955|Drosophila melanogaster CG9095-PA
protein.
Length = 955
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 359 PR*ASPSRLGASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPP 538
P AS + +S+ PPPF S++ R P R + + S +G S T Y ++ P
Sbjct: 564 PTAASTIPVPSSVATPPPFRPKVVSSTTSRTPYRPAVSTASSGIGGSSTSTVGTYPSLSP 623
Query: 539 S 541
+
Sbjct: 624 T 624
>AE014296-3678|AAF51833.3| 583|Drosophila melanogaster CG12377-PA
protein.
Length = 583
Score = 31.5 bits (68), Expect = 1.5
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Frame = +1
Query: 145 YINDILRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKST 324
Y+ D+++ A D AI Y+ R + RL +A + +W R + P + T
Sbjct: 300 YVRDLMKHCGLSPATKFDRVAILYARRVPNPMPVRLSSARSLNNKWID--RSSLRPPQHT 357
Query: 325 A-------VLFKRGRPPNTTLSIPLPTRRVNNPAPAVRPIT 426
L PP +T ++P P + + P P RP++
Sbjct: 358 KQPKHPRHALRPVCNPPPSTTTLPPPKLKPHPPCPLFRPVS 398
>AE013599-3359|AAF46819.1| 543|Drosophila melanogaster CG3292-PA
protein.
Length = 543
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -2
Query: 633 DGAYASFVECHLISKG-HFTSPTYHRVET 550
DG Y FVE LI G HF SPTY ET
Sbjct: 366 DGGYFLFVEGGLIDYGNHFNSPTYSLSET 394
>BT010037-1|AAQ22506.1| 409|Drosophila melanogaster LD43171p
protein.
Length = 409
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 343 GRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPK 459
G P T S P P V APA PI+ P+ +AP+
Sbjct: 280 GPAPAVTYSAPAPVPVVRYSAPAPAPISYAPAPVSYAPQ 318
>AE014298-2534|AAN09435.1| 409|Drosophila melanogaster CG32564-PA
protein.
Length = 409
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 343 GRPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIPWAPK 459
G P T S P P V APA PI+ P+ +AP+
Sbjct: 280 GPAPAVTYSAPAPVPVVRYSAPAPAPISYAPAPVSYAPQ 318
>AY128472-1|AAM75065.1| 836|Drosophila melanogaster RE28238p
protein.
Length = 836
Score = 30.3 bits (65), Expect = 3.6
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 386 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 544
GAS PPPP Q + +P G R + SP+T +PT +R+ P F
Sbjct: 198 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPPLGF 246
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 30.3 bits (65), Expect = 3.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 307 NPTKSTAVLFKRGRPPNTTLSIPLPTRRVNNPAP 408
N + ++ +L K+ R PNT + LPT PAP
Sbjct: 301 NQSTASVMLVKKSRNPNTITNTDLPTSSTKVPAP 334
>AE014134-2320|AAN10833.1| 836|Drosophila melanogaster CG6043-PC,
isoform C protein.
Length = 836
Score = 30.3 bits (65), Expect = 3.6
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 386 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 544
GAS PPPP Q + +P G R + SP+T +PT +R+ P F
Sbjct: 198 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPPLGF 246
>AE014134-2318|AAN10831.1| 759|Drosophila melanogaster CG6043-PB,
isoform B protein.
Length = 759
Score = 30.3 bits (65), Expect = 3.6
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 386 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 544
GAS PPPP Q + +P G R + SP+T +PT +R+ P F
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPPLGF 169
>AE014134-2317|AAF53274.2| 759|Drosophila melanogaster CG6043-PA,
isoform A protein.
Length = 759
Score = 30.3 bits (65), Expect = 3.6
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 386 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 544
GAS PPPP Q + +P G R + SP+T +PT +R+ P F
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPPLGF 169
>AE014134-2316|AAN10830.1| 918|Drosophila melanogaster CG6043-PD,
isoform D protein.
Length = 918
Score = 30.3 bits (65), Expect = 3.6
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 386 GASITPPPPFAQSRCSTSPYRGPRRSNI*ASPSTVG*HSAPTSRRYATVPPSF 544
GAS PPPP Q + +P G R + SP+T +PT +R+ P F
Sbjct: 121 GASAAPPPPPPQQPSTLAPPTG--RLSAPGSPATA--RKSPTPQRFEPPPLGF 169
>AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-PA
protein.
Length = 926
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 346 RPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIP 447
RPP + P TRR+ PAP P T ++P+P
Sbjct: 459 RPPTRPPTYPPTTRRLTTPAPTYLPPT--NKPLP 490
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 346 RPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIP 447
RPP + P TRR+ PAP P T ++P+P
Sbjct: 670 RPPTRPPTYPPTTRRLTTPAPTYLPPT--NKPLP 701
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 346 RPPNTTLSIPLPTRRVNNPAPAVRPITMFDQPIP 447
RPP + P TRR+ PAP P T ++P+P
Sbjct: 773 RPPTRPPTYPPTTRRLTTPAPTYLPPT--NKPLP 804
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,520,701
Number of Sequences: 53049
Number of extensions: 995562
Number of successful extensions: 3617
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 3108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3588
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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