Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_C03
(865 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 26 0.52
U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein. 25 0.68
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 25 0.68
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 25 1.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.7
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 3.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.6
AF442147-1|AAL35348.1| 33|Apis mellifera abaecin precursor pro... 23 4.8
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 8.4
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 8.4
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.8 bits (54), Expect = 0.52
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 116 RPLPXYYSVCISTIYSGLRRPIWRSSPMTPP 208
RPL + I + YS L R WR PP
Sbjct: 1328 RPLSEHIYSSIDSDYSTLERTAWRQQQPPPP 1358
>U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein.
Length = 53
Score = 25.4 bits (53), Expect = 0.68
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 370 IPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKY 468
+PLP N P P RP F P+ PK+K+
Sbjct: 21 VPLP----NVPQPGRRPFPTFPGQGPFNPKIKW 49
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 25.4 bits (53), Expect = 0.68
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 76 PGPVTSQPESRKAPPSPRLLFSLYINDILRSPETH 180
PG V PE++ PPS L+ + + LR P+ H
Sbjct: 287 PGEVDLPPETQPTPPSATLVGTTITH--LRDPDHH 319
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 24.6 bits (51), Expect = 1.2
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +2
Query: 47 VPISSRGNAFPAPSRHSRSPARLRPLPXYYSVCISTIYSGLRRPIWRSSPMTPP 208
VP ++ A P P P+P V STI S +R + S PM PP
Sbjct: 773 VPQNTNSQAIPRIPILPMIPVYCVPVP---QVNDSTILSPVREKLSSSQPMQPP 823
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 2.7
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 232 ALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLS 369
A LH + W + +I++NP+ + V KR P+ ++
Sbjct: 825 ATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIA 870
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 2.7
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 232 ALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLS 369
A LH + W + +I++NP+ + V KR P+ ++
Sbjct: 821 ATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIA 866
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 27 DYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQ 140
D+L+N + +P+HV G PQ L+ T Q
Sbjct: 87 DWLANANSPVGSPSAALQPQHVVYGNPQQQQLAAETQQ 124
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 398 TPPPPFAQSRCSTSPYRGPRRS 463
TP P AQ YRGP S
Sbjct: 1339 TPVPRLAQDSSEDESYRGPSAS 1360
>AF442147-1|AAL35348.1| 33|Apis mellifera abaecin precursor
protein.
Length = 33
Score = 22.6 bits (46), Expect = 4.8
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 370 IPLPTRRVNNPAPAVRPITMFDQPIPWAPKV 462
+PLP N P P RP F P+ PK+
Sbjct: 7 VPLP----NVPQPGRRPFPTFPGQGPFNPKI 33
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.8 bits (44), Expect = 8.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 453 GPRYGLVEHRDWANGGG 403
GPR GL+ W GGG
Sbjct: 152 GPRNGLLPLLVWIYGGG 168
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.8 bits (44), Expect = 8.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 453 GPRYGLVEHRDWANGGG 403
GPR GL+ W GGG
Sbjct: 152 GPRNGLLPLLVWIYGGG 168
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 248,638
Number of Sequences: 438
Number of extensions: 6461
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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