Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_C02
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46381-10|CAE17898.2| 366|Caenorhabditis elegans Hypothetical p... 32 0.62
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 31 1.4
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 31 1.4
AC006610-7|AAK85451.1| 392|Caenorhabditis elegans Hypothetical ... 31 1.4
Z81581-14|CAH10785.1| 628|Caenorhabditis elegans Hypothetical p... 30 2.5
Z81581-12|CAB70244.3| 635|Caenorhabditis elegans Hypothetical p... 30 2.5
Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z71185-5|CAA94911.1| 1078|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z46381-10|CAE17898.2| 366|Caenorhabditis elegans Hypothetical
protein M01F1.9 protein.
Length = 366
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 189 IR*ALKISNLCWGLRGALEML-FRALLILCSNVTHPEASKSTPRYRHRSNTT 37
IR + +SNL G +G +E L + +L ++C +S STP R R T+
Sbjct: 21 IRITVTVSNLSRGKQGVVEQLAWGSLQLICERTIGATSSNSTPSSRPRPTTS 72
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 390 GVSGGSTRHHGQWQEPPPNLIRFVRNCGGPGNSSAG 497
G GGS + H Q Q+ P I+++ G GN+ G
Sbjct: 2124 GGGGGSQQPHQQQQQQPQQRIQYIPQVTGSGNNGGG 2159
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 390 GVSGGSTRHHGQWQEPPPNLIRFVRNCGGPGNSSAG 497
G GGS + H Q Q+ P I+++ G GN+ G
Sbjct: 2124 GGGGGSQQPHQQQQQQPQQRIQYIPQVTGSGNNGGG 2159
>AC006610-7|AAK85451.1| 392|Caenorhabditis elegans Hypothetical
protein C30F12.5 protein.
Length = 392
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 694 EVPPDHPVXGRGTEDPVTP-DPRRGTPPITRWAPRGGARP 578
++P D P G P+ P DP GT P R AP G P
Sbjct: 315 QLPIDEPRIGHPLYSPLPPIDPTYGTIPRARLAPNGAPPP 354
>Z81581-14|CAH10785.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Frame = +2
Query: 491 RRFSRRHKDPTAGTRGGARQNPGPVV-------SRAGTSAASGCPPRDRRRPASGVGGDR 649
R+ +R + GG+ Q GP S AG S G PP R P S ++
Sbjct: 28 RQQRKRRAGISGAATGGSHQRDGPFACAGGNGYSSAGFSNGRGFPPLGGRSPQSSFDSNQ 87
Query: 650 VFGTSASNWM 679
+ NWM
Sbjct: 88 DVAQISMNWM 97
>Z81581-12|CAB70244.3| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Frame = +2
Query: 491 RRFSRRHKDPTAGTRGGARQNPGPVV-------SRAGTSAASGCPPRDRRRPASGVGGDR 649
R+ +R + GG+ Q GP S AG S G PP R P S ++
Sbjct: 28 RQQRKRRAGISGAATGGSHQRDGPFACAGGNGYSSAGFSNGRGFPPLGGRSPQSSFDSNQ 87
Query: 650 VFGTSASNWM 679
+ NWM
Sbjct: 88 DVAQISMNWM 97
>Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Frame = +2
Query: 491 RRFSRRHKDPTAGTRGGARQNPGPVV-------SRAGTSAASGCPPRDRRRPASGVGGDR 649
R+ +R + GG+ Q GP S AG S G PP R P S ++
Sbjct: 28 RQQRKRRAGISGAATGGSHQRDGPFACAGGNGYSSAGFSNGRGFPPLGGRSPQSSFDSNQ 87
Query: 650 VFGTSASNWM 679
+ NWM
Sbjct: 88 DVAQISMNWM 97
>Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Frame = +2
Query: 491 RRFSRRHKDPTAGTRGGARQNPGPVV-------SRAGTSAASGCPPRDRRRPASGVGGDR 649
R+ +R + GG+ Q GP S AG S G PP R P S ++
Sbjct: 28 RQQRKRRAGISGAATGGSHQRDGPFACAGGNGYSSAGFSNGRGFPPLGGRSPQSSFDSNQ 87
Query: 650 VFGTSASNWM 679
+ NWM
Sbjct: 88 DVAQISMNWM 97
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/70 (30%), Positives = 27/70 (38%)
Frame = +2
Query: 413 SPWSVARAAAKSDKIRKKLRWAWKQLRRFSRRHKDPTAGTRGGARQNPGPVVSRAGTSAA 592
SP A K K R K A + RR K P + ++ P R + +A
Sbjct: 322 SPSQSKSPAPKRAKSRSKSPPAPARRRRSPSASKSPPPAPKRAKSRSKSPPARRRRSPSA 381
Query: 593 SGCPPRDRRR 622
S PP RRR
Sbjct: 382 SKSPPAPRRR 391
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/64 (29%), Positives = 25/64 (39%)
Frame = -1
Query: 709 RKVSAEVPPDHPVXGRGTEDPVTPDPRRGTPPITRWAPRGGARPGP*NNRAWVLSSATSS 530
R SA P P R +P P+R PP R ++ P RA S + +
Sbjct: 377 RSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPA 436
Query: 529 PSRR 518
P RR
Sbjct: 437 PRRR 440
>Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 269 AVGQWLRLPADVPKAYYHAAVQDGGLAIPSVR 364
++G + +PA V YY A++Q+G ++ PS R
Sbjct: 843 SIGFSVDIPAHVSYHYYQASIQEGPMSPPSSR 874
>Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 269 AVGQWLRLPADVPKAYYHAAVQDGGLAIPSVR 364
++G + +PA V YY A++Q+G ++ PS R
Sbjct: 843 SIGFSVDIPAHVSYHYYQASIQEGPMSPPSSR 874
>Z71185-5|CAA94911.1| 1078|Caenorhabditis elegans Hypothetical
protein C35A5.8 protein.
Length = 1078
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 131 ISRAPLKPQQRLEILRAHLIPRFQHGFVFGNIS 229
I+R PLK RLE+ H++ +F+ ++ I+
Sbjct: 523 IARFPLKGNLRLEVSFIHMLEQFRRAYIMDQIT 555
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,816,283
Number of Sequences: 27780
Number of extensions: 527181
Number of successful extensions: 1658
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1648
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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