Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_B14
(900 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 66 4e-13
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 66 4e-13
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 66 4e-13
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 63 4e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 62 5e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 62 5e-12
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 62 7e-12
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 62 9e-12
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 61 1e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 61 1e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 59 6e-11
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 58 8e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 56 6e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 54 1e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 53 3e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 50 4e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 48 9e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 46 4e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 44 3e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 1e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 37 2e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 5e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 32 0.008
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 32 0.008
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 32 0.008
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 32 0.008
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.014
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.10
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.8
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 66.1 bits (154), Expect = 4e-13
Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 11/159 (6%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 364
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 365 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 532
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 533 KFGSRMHNSDEMDFVIDKR-----IXSXFESXAWDVTDL 634
KFGS N D++ + + ++S WD+ ++
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIINV 206
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 66.1 bits (154), Expect = 4e-13
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Frame = +2
Query: 104 CGRMRKR--NITVPHDRLAPRNVRSGVSPDSKIVVNLTLHLRHANIRESESTVRILADLQ 277
CGR KR N + R V + P ++ +TL + ++ E + A L+
Sbjct: 51 CGRHEKRLLNELLSSYNTLERPVANESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLK 108
Query: 278 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS 451
+ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 109 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Query: 452 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 580
++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 169 YVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 66.1 bits (154), Expect = 4e-13
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Frame = +2
Query: 104 CGRMRKR--NITVPHDRLAPRNVRSGVSPDSKIVVNLTLHLRHANIRESESTVRILADLQ 277
CGR KR N + R V + P ++ +TL + ++ E + A L+
Sbjct: 51 CGRHEKRLLNELLSSYNTLERPVANESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLK 108
Query: 278 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS 451
+ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 109 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Query: 452 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 580
++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 169 YVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 63.7 bits (148), Expect = 2e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 403
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 580
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 62.9 bits (146), Expect = 4e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 403
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 580
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 62.5 bits (145), Expect = 5e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 403
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 580
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 62.5 bits (145), Expect = 5e-12
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Frame = +2
Query: 164 VRSGVSPDSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKRLSWNAGEWGCST 334
VR V+ + V + L L N++ T + ++ +W D +L W+ E+G
Sbjct: 40 VRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLKWDPKEYGGVE 97
Query: 335 WL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWP 508
L V S+ +WRPD+VL N A A +A ++ G V W + + ++ +P
Sbjct: 98 MLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFP 157
Query: 509 NDMQTCTFKFGSRMHNSDEMD 571
D QTC KFGS ++ ++D
Sbjct: 158 FDEQTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 62.1 bits (144), Expect = 7e-12
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Frame = +2
Query: 158 RNVRSGVSPDSKIVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGC 328
R +R ++ + V L L L N++ T + ++ W D +L WN E+G
Sbjct: 47 RLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYKLKWNPEEYGG 104
Query: 329 STWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQ 493
L V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 105 VEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEIN 161
Query: 494 LDNWPNDMQTCTFKFGSRMHNSDEMD 571
++ +P D Q+C KFGS +N ++D
Sbjct: 162 VEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 61.7 bits (143), Expect = 9e-12
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 403
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 580
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 403
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 580
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 403
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 580
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 61.3 bits (142), Expect = 1e-11
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 364
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 365 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 541
PD+VL N A A +A + + G V W + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 542 SRMHNSDEMD 571
S ++ ++D
Sbjct: 173 SWTYDGFKVD 182
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 61.3 bits (142), Expect = 1e-11
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Frame = +2
Query: 158 RNVRSGVSPDSKIVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGC 328
R +R + + +VV L L L N+++ T + L+ W D + W+ E+G
Sbjct: 34 RLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGG 91
Query: 329 STWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDN 502
T L V SE +W PD+VL N A G + +A + G V W + + +
Sbjct: 92 VTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRY 151
Query: 503 WPNDMQTCTFKFGSRMHNSDEMD 571
+P D QTC KFGS ++ ++D
Sbjct: 152 FPFDQQTCFMKFGSWTYDGIQID 174
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 60.1 bits (139), Expect = 3e-11
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 6/139 (4%)
Frame = +2
Query: 191 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 361
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 362 RPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 532
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 533 KFGSRMHNSDEMDFVIDKR 589
FGS +H+ +E++ +DK+
Sbjct: 186 NFGSWVHSGEEVNIFLDKK 204
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.8 bits (136), Expect = 6e-11
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 364
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 365 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 532
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 533 KFGSRMHNSDEMD 571
K GS ++ ++D
Sbjct: 170 KLGSWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 58.4 bits (135), Expect = 8e-11
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Frame = +2
Query: 272 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 445
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 446 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR----IXSXFESX 613
++ + + + +P D Q C KFGS ++ ++D + I S +
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNG 195
Query: 614 AWDV 625
WD+
Sbjct: 196 EWDL 199
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 55.6 bits (128), Expect = 6e-10
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 8/146 (5%)
Frame = +2
Query: 158 RNVRSGVSPDSKIVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKRLSWNAGEWG- 325
R +R + ++ V + L L N++ T + ++ W D +L WN ++G
Sbjct: 34 RLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGG 91
Query: 326 CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQ 493
T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 92 VDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEID 148
Query: 494 LDNWPNDMQTCTFKFGSRMHNSDEMD 571
++ +P D QTC KFGS ++ +D
Sbjct: 149 VEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 4/140 (2%)
Frame = +2
Query: 164 VRSGVSPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTW 337
VR + + V L L H ++ E + + W D L WNA E+ G
Sbjct: 21 VRPAENSSQPLAVVFGLSLHHIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVI 80
Query: 338 LVSSERLWRPDVVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPN 511
V R+WRPD +L N A + V S+ G V W+ + + ++ +P
Sbjct: 81 RVPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPF 140
Query: 512 DMQTCTFKFGSRMHNSDEMD 571
D Q C K+ S ++ +++
Sbjct: 141 DEQRCVLKWASWTYDGYQLE 160
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 53.2 bits (122), Expect = 3e-09
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +2
Query: 233 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 403
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 404 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 544
R+ +G V + RL I M L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 49.6 bits (113), Expect = 4e-08
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Frame = +2
Query: 200 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 376
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 377 L--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDN--WPNDMQTCTFKFGS 544
+ + + ++ V N+G++ + TP+ + D+ WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
Query: 545 RMHNSDEM 568
H S+E+
Sbjct: 180 WSHGSNEI 187
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.4 bits (110), Expect = 9e-08
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +2
Query: 275 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGS 445
+ +W D RLS+ S + ER+WRPD N + + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 446 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 544
+ + RL I M+L N+P D Q+C GS
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 46.4 bits (105), Expect = 4e-07
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 6/137 (4%)
Frame = +2
Query: 185 DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLVSSER 355
D +V + L +R A I + + + + W+D+RL +N G T L + R
Sbjct: 56 DGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASR 114
Query: 356 LWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
+W PD+ N + + R+ NGSV + R+ ++ M L +P D Q C
Sbjct: 115 VWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVC 174
Query: 527 TFKFGSRMHNSDEMDFV 577
+ + S +D++ F+
Sbjct: 175 SLRMASYGWTTDDLVFL 191
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.6 bits (98), Expect = 3e-06
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Frame = +2
Query: 185 DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLVSSER 355
D VV + + +R + I + + + W+D+RL +N G T L + R
Sbjct: 56 DGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASR 114
Query: 356 LWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
+W PD+ N + + R+ NGSV + R+ ++ M L +P D Q C
Sbjct: 115 VWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVC 174
Query: 527 TFKFGSRMHNSDEMDFV 577
+ + S +D++ F+
Sbjct: 175 SLRMASYGWTTDDLVFL 191
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.1 bits (92), Expect = 1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 233 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 412
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 413 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 544
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 284 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 436
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 437 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 544
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 284 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 436
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 437 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 544
+GS++ RL I+ M L +P D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 284 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 436
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 437 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 544
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 37.1 bits (82), Expect = 2e-04
Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Frame = +2
Query: 242 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 409
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 410 YALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 577
++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S H + ++ F+
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 35.9 bits (79), Expect = 5e-04
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 350 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 520
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 521 TCTFKFGSRMHNSDEMDFVID 583
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 31.9 bits (69), Expect = 0.008
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 4/132 (3%)
Frame = +2
Query: 194 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 367
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 86 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 145
Query: 368 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 541
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 146 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 205
Query: 542 SRMHNSDEMDFV 577
S + + +V
Sbjct: 206 SISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 31.9 bits (69), Expect = 0.008
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 4/132 (3%)
Frame = +2
Query: 194 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 367
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 86 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 145
Query: 368 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 541
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 146 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 205
Query: 542 SRMHNSDEMDFV 577
S + + +V
Sbjct: 206 SISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.9 bits (69), Expect = 0.008
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 4/132 (3%)
Frame = +2
Query: 194 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 367
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 368 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 541
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 542 SRMHNSDEMDFV 577
S + + +V
Sbjct: 257 SISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 31.9 bits (69), Expect = 0.008
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 4/132 (3%)
Frame = +2
Query: 194 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 367
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 86 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 145
Query: 368 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 541
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 146 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 205
Query: 542 SRMHNSDEMDFV 577
S + + +V
Sbjct: 206 SISYEQTAITYV 217
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.014
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 356 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 526
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 527 TFKFGSRMHNSDEM 568
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.3 bits (60), Expect = 0.10
Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Frame = +2
Query: 194 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 355
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 356 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 520
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 521 TCTFKFGSRMHNSDEM 568
C S ++ ++
Sbjct: 129 ICPIYIESFSYHKQKL 144
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 337 PSAAAPFPCVPTQS 296
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,086
Number of Sequences: 438
Number of extensions: 4533
Number of successful extensions: 90
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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