Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_B08
(892 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 32 0.53
10_01_0274 - 2901033-2901778,2902475-2902634 31 1.6
07_03_1747 + 29188568-29188715,29188793-29189541 31 1.6
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 30 2.1
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 2.1
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 29 3.8
01_05_0490 + 22672241-22674679 29 3.8
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 6.6
07_03_1136 + 24218601-24218734,24218769-24219906 29 6.6
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 29 6.6
09_02_0543 + 10427321-10428315,10428440-10429154 28 8.7
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 28 8.7
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 8.7
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 8.7
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 24 8.8
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 32.3 bits (70), Expect = 0.53
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 324 HQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQM-QGQVDYDFGVGG 160
H P AAA P VP++ P L + GG GL S S + G + D G+GG
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>10_01_0274 - 2901033-2901778,2902475-2902634
Length = 301
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Frame = +3
Query: 702 PPGTPXG---AXXRVPXRXPGXXXPXXRCPPPXXP 797
PP TP G P PG P CPPP P
Sbjct: 191 PPSTPPGYGQPAPECPPADPGYGQPAPECPPPPTP 225
>07_03_1747 + 29188568-29188715,29188793-29189541
Length = 298
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +2
Query: 377 PPPGTTLSAPVYLITAPSPG*SAWTLALQFLCS*TIGPTTCRLARSSSVLG 529
PPP TT++ V L TA + S + QF+C+ TTC + S S+ G
Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESESLPG 260
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 222 VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTL 338
V+ H + R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 679 SXXLPGXXPPAPPXXPXXGSPXGXXXXAPRXXVAXPPXXPPSXG 810
S + G PP PP P G P PP PP G
Sbjct: 1074 SVGIQGGIPPLPPPLPPTLGDYGVAPPPPSIGAGAPPPPPPPGG 1117
>08_02_1291 +
25930056-25930067,25930289-25930334,25930434-25930546,
25930645-25930930,25931357-25931421,25931642-25931693,
25931774-25931883,25932611-25932641,25932853-25933004,
25934622-25934840
Length = 361
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 237 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 148
+GG L ++Q G Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129
>01_05_0490 + 22672241-22674679
Length = 812
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +3
Query: 702 PPGTPXGAXXRVPXRXPGXXXPXXRCPPPXXPPFXRXRXXXXXXXPXP 845
PP P R P + P P PP PPF R P P
Sbjct: 643 PPPPPTTRRSRKPPQPPSRPAPPPPPPPQQQPPFYPRRAVVYYTYPLP 690
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 628 VXXPXPXPXXXLXVGXXSXXLPGXXPPAPPXXPXXGSPXGXXXXAPR 768
V P P P P P APP P G P G PR
Sbjct: 596 VPRPPPAPSATANTASALPPPPPRPPGAPPPPPPPGKPGGPPPPPPR 642
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = -3
Query: 815 PXPXEGGXXGGXATXXRGAXXXXPXGDPXXGXXGGAGGXXPGRXXEXXPTXRXXXGXGXG 636
P P GG G G P G GGA G PG R G G G
Sbjct: 133 PAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGG 192
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/54 (27%), Positives = 18/54 (33%)
Frame = +1
Query: 643 PXPXXXLXVGXXSXXLPGXXPPAPPXXPXXGSPXGXXXXAPRXXVAXPPXXPPS 804
P P + +PG PP PP P +P PP PPS
Sbjct: 50 PPPPQAMYQAHPQYPMPGSLPPPPPRPPSFAPENALPPSSP--PPPSPPPPPPS 101
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 691 PGXXPPAPPXXPXXGSPXGXXXXAPRXXVAXPPXXPPS 804
PG P A P P SP AP + PP PP+
Sbjct: 68 PGPGPAAAPS-PHSPSPSNAPWVAPAADIPPPPPPPPN 104
>07_03_0809 -
21669632-21669637,21669871-21670131,21670573-21670752,
21671458-21672819
Length = 602
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 109 SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMN 264
+L +D L+ YD+ PPDS+ V HA + +R+L + +N
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 406 GRGERSPRRWLQPRLAVPRQASTSVPRTP 320
GRG RS R L+P LA+ A + +P P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -2
Query: 351 VRPPQAFRGHQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQV 184
++PP H + AP P +P+ S P++ + PH S +QM Q+
Sbjct: 551 LQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSNQMMPQM 606
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 24.2 bits (50), Expect(2) = 8.8
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 702 PPGTPXGAXXRVPXRXPGXXXPXXRCPPPXXPP 800
PP P G +P P P PPP PP
Sbjct: 1139 PPPLPEGPPP-LPSDSPPCQPPLPPSPPPATPP 1170
Score = 22.2 bits (45), Expect(2) = 8.8
Identities = 10/37 (27%), Positives = 11/37 (29%)
Frame = +3
Query: 780 PPPXXPPFXRXRXXXXXXXPXPXXPXXXQAXXXPACP 890
PPP PP P P P P+ P
Sbjct: 1181 PPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPPVPSSP 1217
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,317,004
Number of Sequences: 37544
Number of extensions: 538527
Number of successful extensions: 2042
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1984
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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