Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_B02
(879 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1795.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 28 1.5
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 28 2.0
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 27 2.7
SPBC11B10.02c |his3||histidinol-phosphate aminotransferase imida... 27 3.5
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 27 3.5
SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 4.7
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 26 6.1
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 26 6.1
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 26 6.1
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 6.1
SPAC1805.05 |cki3||serine/threonine protein kinase Cki3|Schizosa... 26 8.1
SPBC1347.06c |cki1||serine/threonine protein kinase Cki1|Schizos... 26 8.1
SPBP35G2.05c |cki2||serine/threonine protein kinase Cki2|Schizos... 26 8.1
SPCC594.03 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 26 8.1
>SPCC1795.12c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 112
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 129 PTDTSIEPVYPGCDYKTVAALMMEPRDPDSLEIRHNGEFSNQFPWVD 269
PT TS PVY G ++A +PR +R E ++FP D
Sbjct: 4 PTTTSYSPVYTGNPLYDISASQSDPRQRIRKNVRFQTEV-DEFPDFD 49
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 199 NPGTPTPLKSATMGSSPINF 258
+PGTPT LKS ++ SP +F
Sbjct: 344 DPGTPTSLKSPSLRKSPSSF 363
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +1
Query: 343 YFRPPLPKDSVSDLP-SFLTDFLLLTKSL 426
+ P LP+ S++D P SF +DFL L +++
Sbjct: 521 HINPRLPEGSINDYPSSFWSDFLHLNRAM 549
>SPBC11B10.02c |his3||histidinol-phosphate aminotransferase
imidazole acetol phosphate transaminase
His3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 460 INDIPIIKFLFSPTSSLNVSISMSTHSFPTRLKL 561
IND+ ++K L P +LNV T S + +K+
Sbjct: 124 INDVEVVKVLLEPDFNLNVDAICETLSKDSAIKV 157
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 453 DIEMKTEMCQGLRQKEKVCKEGRKVGNGVFWQWRPKVK 340
++E + QG Q+ K KEG + + QWR VK
Sbjct: 905 ELEAEDSGAQGDTQEVKSKKEGMAIVRDIMRQWRSNVK 942
>SPBC16C6.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 350
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 171 YKTVAALMMEPRDPDSLEIRHNGEFSNQF 257
++ VA+ + E P LEIR EFS F
Sbjct: 161 FQRVASALYEESSPLELEIRSESEFSKMF 189
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 6 VDLQSSAIPRLDTHHLPETRRPLHFDIPSSLPTKVDISSVE 128
V L+ L HHL + PL DIP + KVD+ S+E
Sbjct: 480 VTLKQKLNKELRDHHLFSSCFPLA-DIPRNAAGKVDLKSIE 519
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 26.2 bits (55), Expect = 6.1
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = -3
Query: 394 GRKEGRKRSLLAMEAESK-VGSYFESCLGAITLRVWAPFS*GRSTHGN*LENSP 236
G G +L + S GSY S GA AP S R N L N P
Sbjct: 106 GNNTGANGALFSQSTNSSNSGSYRNSVTGATLPNAHAPHSQNRRRRSNHLNNPP 159
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 424 LAHFCFHLYVEPINDIPIIKFLFSPTSSLNVSISMSTHSFPTRLKLSSKR 573
L F + +E + + I FL+ P N +++ +HS + LKL+ R
Sbjct: 783 LTLFAYKFPLEVVAHLYDILFLYGPGILFNFGLALLSHSQESLLKLNMDR 832
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.2 bits (55), Expect = 6.1
Identities = 24/101 (23%), Positives = 39/101 (38%)
Frame = +1
Query: 121 VLNLQTPP*NLSIPAATTKLWQL**WNPGTPTPLKSATMGSSPINFHGSISLMRMAPKPS 300
VLN TP + S+ ++T + N TP S S+PI +++ S
Sbjct: 1541 VLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSSS 1600
Query: 301 AL*HPNMTRNMTRLYFRPPLPKDSVSDLPSFLTDFLLLTKS 423
L + T L P+ SV + + +T +L S
Sbjct: 1601 VLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSS 1641
>SPAC1805.05 |cki3||serine/threonine protein kinase
Cki3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 439
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 140 GVCRFNTTNVHFGRERGRNIEME 72
G R+ + N H GRE+ R ++E
Sbjct: 183 GTARYMSINTHLGREQSRRDDLE 205
>SPBC1347.06c |cki1||serine/threonine protein kinase
Cki1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 140 GVCRFNTTNVHFGRERGRNIEME 72
G R+ + N H GRE+ R ++E
Sbjct: 180 GTARYMSINTHLGREQSRRDDLE 202
>SPBP35G2.05c |cki2||serine/threonine protein kinase
Cki2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 140 GVCRFNTTNVHFGRERGRNIEME 72
G R+ + N H GRE+ R ++E
Sbjct: 180 GTARYMSINTHLGREQSRRDDLE 202
>SPCC594.03 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 108
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 320 MFGCYNAEGLGAILIREI 267
+FGC++A GLG L EI
Sbjct: 64 LFGCWSANGLGIALAYEI 81
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,715,003
Number of Sequences: 5004
Number of extensions: 82781
Number of successful extensions: 283
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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