Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_B02
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z34801-4|CAA84328.1|  236|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U80028-6|AAQ01536.1|  365|Caenorhabditis elegans Serpentine rece...    29   5.8  
AF067950-6|AAG24156.2|  372|Caenorhabditis elegans Serpentine re...    29   5.8  
AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical...    28   7.7  

>Z34801-4|CAA84328.1|  236|Caenorhabditis elegans Hypothetical
           protein F59A2.3 protein.
          Length = 236

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 361 PKDSVSDLPSFLTDFLL-LTKSLAHFCFHLYVEPINDIP 474
           P  +V+ +P  +  F + +TK     CFHL + P++D P
Sbjct: 112 PSQAVAPVPVAMPPFTVEITKGDQRLCFHLELVPVDDQP 150


>U80028-6|AAQ01536.1|  365|Caenorhabditis elegans Serpentine
           receptor, class w protein123 protein.
          Length = 365

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +3

Query: 498 DLFVECINLNEYSQLSNKTQAVIQANANRSDXDWRYTAVRIFSKLSIKS-TKXQFSALGK 674
           D+F EC++L+ Y  +  K    +  + +R    W    +     L I++    ++ ALGK
Sbjct: 98  DIFFECLSLDTYGLVLTKALLTVVKDYSRRCSTWLIFFIAFIRTLIIQNPLSSKYEALGK 157


>AF067950-6|AAG24156.2|  372|Caenorhabditis elegans Serpentine
           receptor, class w protein122 protein.
          Length = 372

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +3

Query: 498 DLFVECINLNEYSQLSNKTQAVIQANANRSDXDWRYTAVRIFSKLSIKS-TKXQFSALGK 674
           D+F EC++L+ Y  +  K    +  + +R    W    +     L I++    ++ ALGK
Sbjct: 98  DIFFECLSLDTYGLVLTKALLTVVKDYSRRCSTWLIFFIAFIRTLIIQNPLSSKYEALGK 157


>AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical
           protein Y57A10A.31 protein.
          Length = 1048

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -1

Query: 459 RLDIEMKTEMCQGLRQKEKVCKE--GRKVGNGVFWQWRPKVKSGHISSHVW 313
           +LD +++   C   +Q++ +  +   +     +F +W P  KSG I  H W
Sbjct: 583 QLDAKLRATFCMLTKQEDPIMMQDDAQYYVVRIFEEWTPNSKSGVIGVHGW 633


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,763,403
Number of Sequences: 27780
Number of extensions: 477006
Number of successful extensions: 1344
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)