Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_B01
(841 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 69 4e-14
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 25 0.87
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 1.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.6
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 4.6
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 69.3 bits (162), Expect = 4e-14
Identities = 54/186 (29%), Positives = 78/186 (41%), Gaps = 4/186 (2%)
Frame = +3
Query: 87 RQTMLFSATQTKKTEALTSLALKHEPVYVGVDDHREQATVDSLEQGYIVCPSEKRMMVLF 266
RQT++FSAT + + L L + Y+ + +EQ + K+ +L
Sbjct: 383 RQTLMFSATFPDEVQHLARRFLNN---YLFLAVGIVGGACSDVEQNFYEVARNKKKDLLK 439
Query: 267 TFLKKNRKKKVM----VFFSTCMSVKYHHELFNYIDLPVMSIHGXXXXXXXXXXXXXXCN 434
L++ + VF + + + P SIHG +
Sbjct: 440 EILERENDSGTLGGTLVFVEMKKKADFIAVFLSENNYPTTSIHGDRLQRQREEALADFKS 499
Query: 435 AESGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGLGTSGHALLFLRPE 614
IL+ T VAARGLDI V ++ YD P EY+HR+GRT R +G G A F PE
Sbjct: 500 GRMSILVATAVAARGLDIKNVSHVINYDLPKGIDEYVHRIGRTGR-VGNRGRATSFFDPE 558
Query: 615 ELGFLR 632
E LR
Sbjct: 559 EDAPLR 564
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 25.0 bits (52), Expect = 0.87
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Frame = -1
Query: 796 SDENHRXSGTFGGFFCR-LIQEIVSRDKFFSCSXYPQLYSMRIQNSFRVTF---DCF--- 638
SD+ H G GG L++ S D S S Y S +S V DC
Sbjct: 56 SDDLHESDGRVGGKRRNILLRRTDSMDSQNSASTYNSFLSSDSASSGNVYCKCDDCLLGI 115
Query: 637 --KYRKNPSSSGRKNS 596
Y++NPS GRK S
Sbjct: 116 VDDYQRNPSVVGRKKS 131
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 264 IKPSYVSLMGIQYIPVLNYQQLPVLCGHQPQHTPVH 157
++P + S+ I + + LP+LC Q PVH
Sbjct: 209 VRPKFPSMDNINGLSTESKADLPLLCPAQGFPVPVH 244
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 337 WYLTDIQVEKNTITF 293
WYL + +KNTIT+
Sbjct: 160 WYLIGMPGKKNTITY 174
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 337 WYLTDIQVEKNTITF 293
WYL + +KNTIT+
Sbjct: 160 WYLIGMPGKKNTITY 174
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 337 WYLTDIQVEKNTITF 293
WYL + +KNTIT+
Sbjct: 160 WYLIGMPGKKNTITY 174
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 337 WYLTDIQVEKNTITF 293
WYL + +KNTIT+
Sbjct: 160 WYLIGMPGKKNTITY 174
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 337 WYLTDIQVEKNTITF 293
WYL + +KNTIT+
Sbjct: 160 WYLIGMPGKKNTITY 174
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 337 WYLTDIQVEKNTITF 293
WYL + +KNTIT+
Sbjct: 160 WYLIGMPGKKNTITY 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 337 WYLTDIQVEKNTITF 293
WYL + +KNTIT+
Sbjct: 228 WYLIGMPGKKNTITY 242
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 337 WYLTDIQVEKNTITF 293
WYL + +KNTIT+
Sbjct: 228 WYLIGMPGKKNTITY 242
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -2
Query: 498 QRPECPDHAPRHQYKVVYQIQHCKTGRMLLYAS 400
QRP+ D P ++ Q+ HC +L+ S
Sbjct: 361 QRPQDVDKYPAEGLEMKGQMVHCPESDSILFVS 393
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,549
Number of Sequences: 438
Number of extensions: 5414
Number of successful extensions: 26
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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