Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_A12
         (907 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   257   9e-71
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   257   9e-71
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    24   2.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.9  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  257 bits (630), Expect = 9e-71
 Identities = 122/161 (75%), Positives = 134/161 (83%), Gaps = 1/161 (0%)
 Frame = +2

Query: 314 IERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALN 493
           IERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQALN
Sbjct: 31  IERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALN 90

Query: 494 FAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKG 673
           FAFKDKYKQVFLGGVDK TQF RYF            TSLCFVYPLDFARTRLAADVGK 
Sbjct: 91  FAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKA 150

Query: 674 DGQREFSGLGNCISKIFKSDGLIGLYRG-SVCRAXIIIYRA 793
            G+REF+GLGNC++KIFK+DG+ GLYRG  V    IIIYRA
Sbjct: 151 GGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRA 191



 Score = 52.0 bits (119), Expect = 7e-09
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +1

Query: 223 MSNLADPVAFAKDFLAGGISAAVSKTAVS 309
           MS LADPVAFAKDFLAGG++AA+SKT V+
Sbjct: 1   MSGLADPVAFAKDFLAGGVAAAISKTTVA 29



 Score = 32.7 bits (71), Expect = 0.005
 Identities = 27/130 (20%), Positives = 52/130 (40%)
 Frame = +2

Query: 371 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKT 550
           ++ + G+ +   +I K  G+   +RG   +V      +A  F F D  + +      KKT
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPD--PKKT 210

Query: 551 QFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKS 730
            F   +             S    YP D  R R+    G+   +  +    +C + I+K+
Sbjct: 211 PFLISWGIAQVVTTVAGIVS----YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKT 266

Query: 731 DGLIGLYRGS 760
           +G    ++G+
Sbjct: 267 EGGNAFFKGA 276



 Score = 25.8 bits (54), Expect = 0.54
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 380 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 469
           YK  +  +  I K +G  +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  257 bits (630), Expect = 9e-71
 Identities = 122/161 (75%), Positives = 134/161 (83%), Gaps = 1/161 (0%)
 Frame = +2

Query: 314 IERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALN 493
           IERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQALN
Sbjct: 31  IERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALN 90

Query: 494 FAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKG 673
           FAFKDKYKQVFLGGVDK TQF RYF            TSLCFVYPLDFARTRLAADVGK 
Sbjct: 91  FAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKA 150

Query: 674 DGQREFSGLGNCISKIFKSDGLIGLYRG-SVCRAXIIIYRA 793
            G+REF+GLGNC++KIFK+DG+ GLYRG  V    IIIYRA
Sbjct: 151 GGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRA 191



 Score = 52.0 bits (119), Expect = 7e-09
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +1

Query: 223 MSNLADPVAFAKDFLAGGISAAVSKTAVS 309
           MS LADPVAFAKDFLAGG++AA+SKT V+
Sbjct: 1   MSGLADPVAFAKDFLAGGVAAAISKTTVA 29



 Score = 32.7 bits (71), Expect = 0.005
 Identities = 27/130 (20%), Positives = 52/130 (40%)
 Frame = +2

Query: 371 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKT 550
           ++ + G+ +   +I K  G+   +RG   +V      +A  F F D  + +      KKT
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPD--PKKT 210

Query: 551 QFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKS 730
            F   +             S    YP D  R R+    G+   +  +    +C + I+K+
Sbjct: 211 PFLISWGIAQVVTTVAGIVS----YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKT 266

Query: 731 DGLIGLYRGS 760
           +G    ++G+
Sbjct: 267 EGGNAFFKGA 276



 Score = 25.8 bits (54), Expect = 0.54
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +2

Query: 380 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 469
           YK  +  +  I K +G  +F++G F+N++R
Sbjct: 253 YKSTLHCWATIYKTEGGNAFFKGAFSNILR 282


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +1

Query: 265 LAGGISAAVSKTAVSTHRACQAAAPSTARQQADRRRPALQGYRRRLR 405
           + GGI   + + A   H+  +      AR  AD+ R A++  R+ LR
Sbjct: 834 IIGGIGLIIIEVAYKKHQIRKQKKMELARHAADKWRGAIE-KRKTLR 879


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 694 GEFTLAISLTDIGGKTGTCEVKGV 623
           G++ +  +    GGK G C +K V
Sbjct: 603 GQYGIVFACDGWGGKAGPCAIKSV 626


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 694 GEFTLAISLTDIGGKTGTCEVKGV 623
           G++ +  +    GGK G C +K V
Sbjct: 641 GQYGIVFACDGWGGKAGPCAIKSV 664


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,116
Number of Sequences: 438
Number of extensions: 5242
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)