Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP14_FL5_A04
(873 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 58 8e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 58 8e-11
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 54 1e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 52 7e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 52 9e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 52 9e-09
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 52 9e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 52 9e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 51 2e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 50 2e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 50 2e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 50 3e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 50 3e-08
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 49 5e-08
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 49 6e-08
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 48 1e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 47 2e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 47 2e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 46 3e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 46 3e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 44 2e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 43 4e-06
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 1e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 32 0.008
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 31 0.014
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.9
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 58.4 bits (135), Expect = 8e-11
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 287
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 288 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 458
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 459 KRLDISXPISMQLDNWPNDMQTC 527
RL I M L+N+P D Q C
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRC 144
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 58.4 bits (135), Expect = 8e-11
Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Frame = +3
Query: 96 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 254
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 255 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 428
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 429 VSNNGSVSWIKRLDISXPISMQLDNWPNDMQTC 527
+ G V W + + +P D QTC
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTC 159
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 54.4 bits (125), Expect = 1e-09
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 8/150 (5%)
Frame = +3
Query: 114 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 278
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 279 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 449
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 450 SWIKRLDISXPISMQLDNWPNDMQTCTVXV 539
+ + WP D+ CT+ +
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCTIHI 177
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 54.0 bits (124), Expect = 2e-09
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Frame = +3
Query: 114 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 272
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 446
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 447 VSWIKRLDISXPISMQLDNWPNDMQTCTV 533
V W + ++ +P D QTC +
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVM 165
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 52.0 bits (119), Expect = 7e-09
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 365
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 366 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISXPISMQLDNWPNDMQTC 527
PD+VL N A G+Y +R + + NG V W+ ++ + +P D QTC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTC 165
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 51.6 bits (118), Expect = 9e-09
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Frame = +3
Query: 129 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 293
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 294 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 464
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 465 LDISXPISMQLDNWPNDMQTC 527
L I M+L N+P D Q+C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 51.6 bits (118), Expect = 9e-09
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 305
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 470
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 471 ISXPISMQLDNWPNDMQTCTV 533
S+ ++ +P D+QTC +
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVL 169
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 51.6 bits (118), Expect = 9e-09
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 305
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 306 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISX 479
W E+G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 480 PISMQLDNWPNDMQTCTV 533
+ ++ +P D QTC +
Sbjct: 152 SCEIDVEYFPFDEQTCVL 169
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 51.6 bits (118), Expect = 9e-09
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Frame = +3
Query: 87 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 245
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 246 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 419
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 420 ---RARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTC 527
+A + + G V W + ++ +P D QTC
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTC 159
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 50.8 bits (116), Expect = 2e-08
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Frame = +3
Query: 141 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 299
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 300 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 464
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 465 LDISXPISMQLDNWPNDMQTC 527
+ ++ +P D Q+C
Sbjct: 152 AIYKSSCEINVEYFPFDEQSC 172
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 50.4 bits (115), Expect = 2e-08
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTC 527
G Y V++NGS ++ + + +P D Q C
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 50.4 bits (115), Expect = 2e-08
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 405 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTC 527
G Y V++NGS ++ + + +P D Q C
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 50.0 bits (114), Expect = 3e-08
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTC 527
G Y V++NGS ++ + + +P D Q C
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.0 bits (114), Expect = 3e-08
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Frame = +3
Query: 195 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 371
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 372 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTV 533
+L N A + VS+ G V W+ + ++ +P D Q C +
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVL 147
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 49.2 bits (112), Expect = 5e-08
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTC 527
G Y V+++GS ++ M + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHC 125
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 48.8 bits (111), Expect = 6e-08
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTC 527
G Y V+++GS ++ M + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHC 125
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTC 527
G Y V+++GS ++ + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 47.6 bits (108), Expect = 1e-07
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTC 527
G Y V+++GS ++ + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHC 125
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 47.6 bits (108), Expect = 1e-07
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTC 527
G Y V+++GS ++ + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHC 125
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 47.6 bits (108), Expect = 1e-07
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 287
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 288 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 440
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 441 GSVSWIKRLDISXPISMQLDNWPNDMQTCTVXV 539
GS++ RL I+ M L +P D Q C + +
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 47.2 bits (107), Expect = 2e-07
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +3
Query: 117 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 284
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 285 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 452
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 453 WIKRLDISXPISMQLDNWPNDMQTCTV 533
+ + + +WP D C +
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRI 185
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 47.2 bits (107), Expect = 2e-07
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 7/152 (4%)
Frame = +3
Query: 93 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 257
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 258 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 431
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 432 SNNGSVSWIKRLDISXPISMQLDNWPNDMQTC 527
NNG+ ++ + + +P D Q C
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRC 162
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 46.4 bits (105), Expect = 3e-07
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 299
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 300 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 464
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 465 LDISXPISMQLDNWPNDMQTCTV 533
+ ++ M L +P D Q C++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSL 176
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.4 bits (105), Expect = 3e-07
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 287
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 288 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 440
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 441 GSVSWIKRLDISXPISMQLDNWPNDMQTCTVXV 539
GS++ RL I+ M L +P D Q C + +
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.6 bits (98), Expect = 2e-06
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 299
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 300 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 464
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 465 LDISXPISMQLDNWPNDMQTCTV 533
+ ++ M L +P D Q C++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSL 176
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 42.7 bits (96), Expect = 4e-06
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = +3
Query: 234 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 413
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 414 ALR---ARVSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTVXV 539
R R+S +GSV++ R + M L +P D Q CTV +
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEI 179
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.9 bits (84), Expect = 1e-04
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Frame = +3
Query: 285 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 437
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 438 NGSVSWIKRLDISXPISMQLDNWPNDMQTCTVXV 539
+GS++ RL I+ M L +P D Q C + +
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 95
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 31.9 bits (69), Expect = 0.008
Identities = 23/108 (21%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 404
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 405 GDYALRAR---VSNNGSVSWIKRLDISXPISMQLDNWPNDMQTCTVXV 539
+ ++ + ++ ++ ++ +L + +M+ +++P+D Q C++ +
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMI 150
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 31.1 bits (67), Expect = 0.014
Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Frame = +3
Query: 195 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 356
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 357 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISXPISMQLDNWPNDMQ 521
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 522 TCTVXV 539
C + +
Sbjct: 129 ICPIYI 134
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISXPISMQLDNWPNDMQ 521
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 522 TC 527
C
Sbjct: 176 EC 177
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 338 PSAAAPLPCVPTQS 297
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,310
Number of Sequences: 438
Number of extensions: 4916
Number of successful extensions: 74
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -