Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP14_FL5_A01
         (828 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   1.5  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    24   2.0  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   6.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.0  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +1

Query: 673 AAEREKENSSSLSAPCHRRRGPGPKXXFCXLHPYK 777
           +AE E E +SS   P  R + P PK   C L+  K
Sbjct: 14  SAESEFEGASS---PKKRNKNPQPKNAVCALNELK 45


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 487 SHCSGGTSASAPSGRQGAGSDRNSRVP 407
           S CS GT++S  S      SDR++  P
Sbjct: 174 SECSLGTASSTSSTASSRNSDRSAGSP 200


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = -1

Query: 222 TRLPPGAKIASPRVIRSERLRLQVPGGRPGEHARRLERDGAVPANRPDRNR 70
           +++PP A+    R+  + R   Q+P G      ++ E  G +    P+R R
Sbjct: 735 SQMPPTAQPRMERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPIPNRYR 785


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = +1

Query: 664  QXXAAEREKENSSSLSAPCHRRRGPGPKXXFCXLHPYKXQSLPGDVXGX*G 816
            Q  + ++ KE S+  +A       PG       L P K  + PG + G  G
Sbjct: 1093 QKQSDDKTKETSTVTAAAAATNIRPGTADNKPQLKPQKPFTSPGGIPGPNG 1143


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -1

Query: 642 VEHRLPELVAAEHRSHDGRKRQV 574
           V HR PELV       DGR  +V
Sbjct: 191 VIHRSPELVPMPTLKGDGRHMEV 213


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,588
Number of Sequences: 438
Number of extensions: 4204
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)