Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_P21
         (795 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX538319-1|CAD98093.1| 1290|Homo sapiens hypothetical protein pr...    31   3.6  
BC115022-1|AAI15023.1| 1551|Homo sapiens ROBO1 protein protein.        31   3.6  
BC115020-1|AAI15021.1| 1606|Homo sapiens ROBO1 protein protein.        31   3.6  
BC112336-1|AAI12337.1| 1607|Homo sapiens ROBO1 protein protein.        31   3.6  
AF040990-1|AAC39575.1| 1651|Homo sapiens roundabout 1 protein.         31   3.6  

>BX538319-1|CAD98093.1| 1290|Homo sapiens hypothetical protein
           protein.
          Length = 1290

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 395 HNVAEHDCVTAGNRNNNSNLIAXARP 318
           HN     C TAGN N++SNL   +RP
Sbjct: 626 HNDCSISCCTAGNGNSDSNLTTYSRP 651


>BC115022-1|AAI15023.1| 1551|Homo sapiens ROBO1 protein protein.
          Length = 1551

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 395  HNVAEHDCVTAGNRNNNSNLIAXARP 318
            HN     C TAGN N++SNL   +RP
Sbjct: 942  HNDCSISCCTAGNGNSDSNLTTYSRP 967


>BC115020-1|AAI15021.1| 1606|Homo sapiens ROBO1 protein protein.
          Length = 1606

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 395  HNVAEHDCVTAGNRNNNSNLIAXARP 318
            HN     C TAGN N++SNL   +RP
Sbjct: 942  HNDCSISCCTAGNGNSDSNLTTYSRP 967


>BC112336-1|AAI12337.1| 1607|Homo sapiens ROBO1 protein protein.
          Length = 1607

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 395  HNVAEHDCVTAGNRNNNSNLIAXARP 318
            HN     C TAGN N++SNL   +RP
Sbjct: 942  HNDCSISCCTAGNGNSDSNLTTYSRP 967


>AF040990-1|AAC39575.1| 1651|Homo sapiens roundabout 1 protein.
          Length = 1651

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 395  HNVAEHDCVTAGNRNNNSNLIAXARP 318
            HN     C TAGN N++SNL   +RP
Sbjct: 987  HNDCSISCCTAGNGNSDSNLTTYSRP 1012


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,096,328
Number of Sequences: 237096
Number of extensions: 1743171
Number of successful extensions: 2419
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2419
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)