Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_P16
         (847 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.66 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.66 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   4.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.2  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   6.2  
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    22   8.2  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.4 bits (53), Expect = 0.66
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -3

Query: 263 QFYKDIKSFQMKILNPDLSESEKASLHGEACDIYSVYLSQRSAHRV 126
           +FY  I +   KIL  +L  + K  +   A +I+S  +   + +R+
Sbjct: 376 EFYGSIDTLARKILGYNLEAASKYQIVPSALEIFSTSMKDPAFYRI 421


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.4 bits (53), Expect = 0.66
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -3

Query: 263 QFYKDIKSFQMKILNPDLSESEKASLHGEACDIYSVYLSQRSAHRV 126
           +FY  I +   KIL  +L  + K  +   A +I+S  +   + +R+
Sbjct: 376 EFYGSIDTLARKILGYNLEAASKYQIVPSALEIFSTSMKDPAFYRI 421


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 609 HDRVRDAPQILELRVSVR 662
           HD  RD PQIL  + S R
Sbjct: 308 HDTQRDNPQILTYKYSKR 325


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = -3

Query: 293 MKNTSHIHLLQFYKDIKSFQMKILNPDLSESEKASL 186
           +K T   + + F   +++  +  ++P+L+ESE+  L
Sbjct: 173 LKETYPFNPVLFISSLENISLNGIDPELTESEQHRL 208


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = -3

Query: 293 MKNTSHIHLLQFYKDIKSFQMKILNPDLSESEKASL 186
           +K T   + + F   +++  +  ++P+L+ESE+  L
Sbjct: 211 LKETYPFNPVLFISSLENISLNGIDPELTESEQHRL 246


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 312 LCFHAVHEEHESHTSAAVLQGHQIISNED 226
           L FHA+    E   S  VLQ H +  + D
Sbjct: 255 LYFHAMSSIAEFSVSTEVLQDHTLEKSND 283


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 678 PPPRGCEQKRGAQ 640
           P P GC ++RG Q
Sbjct: 1   PGPNGCPRRRGRQ 13


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,323
Number of Sequences: 438
Number of extensions: 4110
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)