Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_P11
(746 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 34 0.10
12_02_0299 - 17051570-17052474,17053542-17053755 27 0.21
02_05_0686 - 30900748-30902167,30903442-30904742 31 0.42
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 30 1.7
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 30 2.2
09_06_0148 - 21214460-21214561,21214993-21215339,21215428-212155... 29 3.0
04_04_0869 - 28883688-28884983 29 3.9
12_02_1174 - 26696869-26698191 29 5.2
06_01_0336 + 2427017-2427121,2427585-2427662,2427889-2427960,242... 29 5.2
05_01_0141 - 937428-937717,938483-938705 29 5.2
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 29 5.2
01_05_0490 + 22672241-22674679 24 5.8
06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,336... 28 6.9
09_02_0603 - 11150739-11150746,11150791-11151340 28 9.1
07_01_0080 + 587674-588510 28 9.1
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 28 9.1
01_03_0005 + 11568545-11569119,11569179-11569191 28 9.1
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 475 GGGGXXXXXGXXXPPXGGXXPPPPPP 552
GGGG G PP PPPPPP
Sbjct: 45 GGGGGDRRGGFQLPPDAAPPPPPPPP 70
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 474 GGGGXXXXXXXXXPPPXGXXPPPPP 548
GGGG PP PPPPP
Sbjct: 45 GGGGGDRRGGFQLPPDAAPPPPPPP 69
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 27.5 bits (58), Expect(2) = 0.21
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +3
Query: 279 PXGPGXXFFXKKXXFFFSPPXXRGXPPPXFXF-FXFXPPL 395
P P F FSPP PPP F F F PPL
Sbjct: 268 PWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPL 307
Score = 24.6 bits (51), Expect(2) = 0.21
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 513 PPPXGXXPPPPP 548
PPP PPPPP
Sbjct: 321 PPPPPPPPPPPP 332
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.1 bits (67), Expect = 0.97
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 512 PPPXGXXXPPPPXPXGXKKKKKKKXXXXPXXXXXXXXXPPP 634
PPP PPPP P G K P PPP
Sbjct: 328 PPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPP 368
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 513 PPPXGXXPPPPPXXXGXK 566
PPP G PPPPP G K
Sbjct: 357 PPPKGPSPPPPPPPGGKK 374
Score = 29.5 bits (63), Expect(2) = 0.42
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 512 PPPXGXXXPPPPXPXGXKK 568
PPP PPPP P G KK
Sbjct: 356 PPPPKGPSPPPPPPPGGKK 374
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 513 PPPXGXXPPPPPXXXGXKKKKKKXXXXXPXXXXXXXXXPPP 635
PPP PPPPP K P PPP
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 513 PPPXGXXPPPPPXXXGXKKKKKKXXXXXPXXXXXXXXXPPP 635
PPP PPPPP K P PPP
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPP 369
Score = 24.6 bits (51), Expect(2) = 9.6
Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
Frame = +2
Query: 512 PPPXGX-XXPPPPXPXG 559
PPP G PPPP P G
Sbjct: 368 PPPGGKKGGPPPPPPKG 384
Score = 21.4 bits (43), Expect(2) = 0.42
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +2
Query: 335 PPXKGXXPPXLXFFXXXPPP 394
PP KG PP PPP
Sbjct: 339 PPPKGPPPPPPAKGPPPPPP 358
Score = 21.4 bits (43), Expect(2) = 9.6
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +2
Query: 335 PPXKGXXPPXLXFFXXXPPP 394
PP KG PP PPP
Sbjct: 348 PPAKGPPPPPPPKGPSPPPP 367
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 514 PPXGGXXPPPPPP 552
PP GG PPPPPP
Sbjct: 298 PPVGGTQPPPPPP 310
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 474 GGGGXXXXXXXXXPPPXGXXPPPPP 548
G GG PPP PPPPP
Sbjct: 260 GSGGPPRPPPPQVPPPPPQAPPPPP 284
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/41 (29%), Positives = 15/41 (36%)
Frame = +3
Query: 513 PPPXGXXPPPPPXXXGXKKKKKKXXXXXPXXXXXXXXXPPP 635
PPP PPPPP +++ P PPP
Sbjct: 29 PPPPSDPPPPPPPHHHHHHRRRHRHSKKPKPQPQPQPPPPP 69
>09_06_0148 -
21214460-21214561,21214993-21215339,21215428-21215538,
21215673-21215835,21215921-21215999,21216110-21216228
Length = 306
Score = 29.5 bits (63), Expect = 3.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 513 PPPXGXXPPPPPXXXGXKKKKKK 581
PPP PPPPP G +++ ++
Sbjct: 198 PPPPAAPPPPPPPARGRRRRGRR 220
Score = 27.9 bits (59), Expect = 9.1
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +1
Query: 514 PPXGGXXPPPPPPXXXXKKKKKKXXXP 594
PP PPPPPP +++ ++ P
Sbjct: 198 PPPPAAPPPPPPPARGRRRRGRRQRDP 224
>04_04_0869 - 28883688-28884983
Length = 431
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 513 PPPXGXXPPPPPXXXGXKKKKKKXXXXXP 599
P P G P P P G KKKK K P
Sbjct: 349 PAPEGSSPAPSPKAAGKKKKKGKSPSHSP 377
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +3
Query: 513 PPPXGXXPPPPPXXXGXKKKKKKXXXXXPXXXXXXXXXPPP 635
PPP PPPPP K + P PPP
Sbjct: 154 PPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPP 194
>06_01_0336 +
2427017-2427121,2427585-2427662,2427889-2427960,
2428105-2428671,2428822-2428935,2431308-2432246
Length = 624
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 551 GGGGGGXXPPXGGXXXPXXXXXPPPP 474
GGGGGG PP PPPP
Sbjct: 496 GGGGGGSAPPLYQMQQKAAAAAPPPP 521
>05_01_0141 - 937428-937717,938483-938705
Length = 170
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 551 GGGGGGXXPPXGGXXXPXXXXXPPPP 474
GGG G PP G P PPPP
Sbjct: 25 GGGHGYPYPPQQGYYPPPPTAYPPPP 50
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +3
Query: 513 PPPXGXXPPPPPXXXGXKKKKKKXXXXXPXXXXXXXXXPPP 635
PPP PPPPP + K P PPP
Sbjct: 367 PPPPPPPPPPPPAVTQQQDVKTSCGPAVPPPPPPTPPPPPP 407
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/40 (30%), Positives = 15/40 (37%)
Frame = +2
Query: 515 PPXGXXXPPPPXPXGXKKKKKKKXXXXPXXXXXXXXXPPP 634
PP PPPP P +++ K P PPP
Sbjct: 365 PPPPPPPPPPPPPPAVTQQQDVKTSCGPAVPPPPPPTPPP 404
>01_05_0490 + 22672241-22674679
Length = 812
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 514 PPXGGXXPPPPPP 552
PP PPPPPP
Sbjct: 603 PPRRPPPPPPPPP 615
Score = 23.0 bits (47), Expect(2) = 5.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 535 PPPPPPXXXXKKKK 576
PPPPPP + +K
Sbjct: 641 PPPPPPPTTRRSRK 654
>06_01_0474 -
3362734-3362827,3363179-3363366,3363458-3363700,
3363820-3364098,3364189-3364386,3364475-3365110,
3365209-3365463,3365579-3365685,3365770-3369566,
3369677-3370166,3370918-3371308,3371481-3371573,
3371687-3371810,3372544-3372791
Length = 2380
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 502 GXXXPPXGGXXPPPPPP 552
G PP G PPPPPP
Sbjct: 2 GAAPPPPGTGAPPPPPP 18
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 27.9 bits (59), Expect = 9.1
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 513 PPPXGXXPPPPP 548
PPP G PPPPP
Sbjct: 38 PPPFGFPPPPPP 49
>07_01_0080 + 587674-588510
Length = 278
Score = 27.9 bits (59), Expect = 9.1
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 514 PPXGGXXPPPPPP 552
PP G PPPPPP
Sbjct: 98 PPSSGSPPPPPPP 110
>01_06_0823 +
32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 27.9 bits (59), Expect = 9.1
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 513 PPPXGXXPPPPP 548
PPP G PPPPP
Sbjct: 42 PPPPGVPPPPPP 53
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -3
Query: 570 FFXXPXGXGGGGXXXPXGGGXXXXXXXTXPPP 475
++ P G GGGG GG T PPP
Sbjct: 112 YYPPPTGGGGGGGGGWQQGGGGGGAYPTPPPP 143
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,029,948
Number of Sequences: 37544
Number of extensions: 437171
Number of successful extensions: 8689
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5920
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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