Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_P10
         (848 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98877-14|CAD56615.1|  338|Caenorhabditis elegans Hypothetical p...    28   9.6  
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p...    28   9.6  
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p...    28   9.6  
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr...    28   9.6  
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p...    28   9.6  
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr...    28   9.6  
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr...    28   9.6  
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres...    28   9.6  

>Z98877-14|CAD56615.1|  338|Caenorhabditis elegans Hypothetical
           protein Y69H2.14 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
 Frame = +1

Query: 265 DNCKPQSPARRSFSGLPGPLGQ----GE--HADSFSVA 360
           ++C+  +PAR+   G PGP GQ    GE  H+D+ S A
Sbjct: 190 NDCQTCAPARQGAPGPPGPAGQPGQPGEPGHSDTSSTA 227


>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
            protein F11A10.1c protein.
          Length = 1242

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 597  PNQERAVNLSILPVSGPGXIPVLSQLSRRLHSWWCSSVNXLSSALXHTPPRSQNXW 764
            P+ + ++    L VS P    ++     +   W  S +  LSS L HT  R ++ W
Sbjct: 1145 PSVQISIAEKELIVSKPATCELIQCCVEKSEGWSVSELERLSSVLSHTIERFRDEW 1200


>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
            protein F11A10.1b protein.
          Length = 1289

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 597  PNQERAVNLSILPVSGPGXIPVLSQLSRRLHSWWCSSVNXLSSALXHTPPRSQNXW 764
            P+ + ++    L VS P    ++     +   W  S +  LSS L HT  R ++ W
Sbjct: 1192 PSVQISIAEKELIVSKPATCELIQCCVEKSEGWSVSELERLSSVLSHTIERFRDEW 1247


>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical protein
            F11A10.1a protein.
          Length = 1291

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 597  PNQERAVNLSILPVSGPGXIPVLSQLSRRLHSWWCSSVNXLSSALXHTPPRSQNXW 764
            P+ + ++    L VS P    ++     +   W  S +  LSS L HT  R ++ W
Sbjct: 1194 PSVQISIAEKELIVSKPATCELIQCCVEKSEGWSVSELERLSSVLSHTIERFRDEW 1249


>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
            protein F11A10.1c protein.
          Length = 1242

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 597  PNQERAVNLSILPVSGPGXIPVLSQLSRRLHSWWCSSVNXLSSALXHTPPRSQNXW 764
            P+ + ++    L VS P    ++     +   W  S +  LSS L HT  R ++ W
Sbjct: 1145 PSVQISIAEKELIVSKPATCELIQCCVEKSEGWSVSELERLSSVLSHTIERFRDEW 1200


>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical protein
            F11A10.1b protein.
          Length = 1289

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 597  PNQERAVNLSILPVSGPGXIPVLSQLSRRLHSWWCSSVNXLSSALXHTPPRSQNXW 764
            P+ + ++    L VS P    ++     +   W  S +  LSS L HT  R ++ W
Sbjct: 1192 PSVQISIAEKELIVSKPATCELIQCCVEKSEGWSVSELERLSSVLSHTIERFRDEW 1247


>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical protein
            F11A10.1a protein.
          Length = 1291

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 597  PNQERAVNLSILPVSGPGXIPVLSQLSRRLHSWWCSSVNXLSSALXHTPPRSQNXW 764
            P+ + ++    L VS P    ++     +   W  S +  LSS L HT  R ++ W
Sbjct: 1194 PSVQISIAEKELIVSKPATCELIQCCVEKSEGWSVSELERLSSVLSHTIERFRDEW 1249


>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expression
            abnormal protein protein.
          Length = 1291

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/56 (26%), Positives = 25/56 (44%)
 Frame = +3

Query: 597  PNQERAVNLSILPVSGPGXIPVLSQLSRRLHSWWCSSVNXLSSALXHTPPRSQNXW 764
            P+ + ++    L VS P    ++     +   W  S +  LSS L HT  R ++ W
Sbjct: 1194 PSVQISIAEKELIVSKPATCELIQCCVEKSEGWSVSELERLSSVLSHTIERFRDEW 1249


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,769,653
Number of Sequences: 27780
Number of extensions: 399537
Number of successful extensions: 976
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)