Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_O18
(806 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF171929-1|AAF03777.1| 820|Homo sapiens metallaproteinase-disin... 33 1.6
Z15115-1|CAA78821.1| 1031|Homo sapiens DNA topoisomerase II pro... 32 2.8
X68060-1|CAA48197.1| 1621|Homo sapiens DNA topoisomerase II prot... 32 2.8
U54831-1|AAB01982.1| 350|Homo sapiens topoisomerase IIb protein. 32 2.8
BC021863-1|AAH21863.1| 485|Homo sapiens Unknown (protein for IM... 32 2.8
AJ011721-1|CAA09753.1| 717|Homo sapiens topoisomerase II beta p... 32 2.8
AF087160-1|AAC77432.1| 1598|Homo sapiens DNA topoisomerase II be... 32 2.8
AB208879-1|BAD92116.1| 1009|Homo sapiens DNA topoisomerase II, b... 32 2.8
X64228-1|CAA45535.1| 2090|Homo sapiens putative oncogene protein. 31 6.5
U80737-1|AAB91436.1| 326|Homo sapiens CAGH16 protein. 31 6.5
BC045620-1|AAH45620.2| 2090|Homo sapiens nucleoporin 214kDa prot... 31 6.5
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod... 31 6.5
>AF171929-1|AAF03777.1| 820|Homo sapiens
metallaproteinase-disintegrin protein.
Length = 820
Score = 32.7 bits (71), Expect = 1.6
Identities = 22/86 (25%), Positives = 35/86 (40%)
Frame = -2
Query: 505 PSGNRMSIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQAXKNNQ 326
PS ++ + P Q P + M HP + S QPP ++ SQ +Q
Sbjct: 738 PSQSQPPVTPSQSHPRVMPSQSQPPVMPSQSHPQLTPSQSQPP---VMPSQSHPQLTPSQ 794
Query: 325 TQSQPKKSQRSTEAFPALSATAHSPA 248
+Q SQR + P+ S +P+
Sbjct: 795 SQPPVTPSQRQPQLMPSQSQPPVTPS 820
>Z15115-1|CAA78821.1| 1031|Homo sapiens DNA topoisomerase II protein.
Length = 1031
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = -2
Query: 499 GNRMSIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQAXK---NN 329
GN S P +K +DD +D ++ + S + + S+ + A K ++
Sbjct: 850 GNLFSFPSYSQK---SEDDSAKFDSNEEDSASVFSPSFGLKQTDKVPSKTVAAKKGKPSS 906
Query: 328 QTQSQPKKSQRSTEAFPALSATAHSPAAPPQWITVSKGKDK 206
T +PK++ + + A+++ + S P+ T KGK +
Sbjct: 907 DTVPKPKRAPKQKKVVEAVNSDSDSEFGIPKKTTTPKGKGR 947
>X68060-1|CAA48197.1| 1621|Homo sapiens DNA topoisomerase II protein.
Length = 1621
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = -2
Query: 499 GNRMSIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQAXK---NN 329
GN S P +K +DD +D ++ + S + + S+ + A K ++
Sbjct: 1440 GNLFSFPSYSQK---SEDDSAKFDSNEEDSASVFSPSFGLKQTDKVPSKTVAAKKGKPSS 1496
Query: 328 QTQSQPKKSQRSTEAFPALSATAHSPAAPPQWITVSKGKDK 206
T +PK++ + + A+++ + S P+ T KGK +
Sbjct: 1497 DTVPKPKRAPKQKKVVEAVNSDSDSEFGIPKKTTTPKGKGR 1537
>U54831-1|AAB01982.1| 350|Homo sapiens topoisomerase IIb protein.
Length = 350
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = -2
Query: 499 GNRMSIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQAXK---NN 329
GN S P +K +DD +D ++ + S + + S+ + A K ++
Sbjct: 169 GNLFSFPSYSQK---SEDDSAKFDSNEEDSASVFSPSFGLKQTDKVPSKTVAAKKGKPSS 225
Query: 328 QTQSQPKKSQRSTEAFPALSATAHSPAAPPQWITVSKGKDK 206
T +PK++ + + A+++ + S P+ T KGK +
Sbjct: 226 DTVPKPKRAPKQKKVVEAVNSDSDSEFGIPKKTTTPKGKGR 266
>BC021863-1|AAH21863.1| 485|Homo sapiens Unknown (protein for
IMAGE:4999541) protein.
Length = 485
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = -2
Query: 499 GNRMSIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQAXK---NN 329
GN S P +K +DD +D ++ + S + + S+ + A K ++
Sbjct: 304 GNLFSFPSYSQK---SEDDSAKFDSNEEDSASVFSPSFGLKQTDKVPSKTVAAKKGKPSS 360
Query: 328 QTQSQPKKSQRSTEAFPALSATAHSPAAPPQWITVSKGKDK 206
T +PK++ + + A+++ + S P+ T KGK +
Sbjct: 361 DTVPKPKRAPKQKKVVEAVNSDSDSEFGIPKKTTTPKGKGR 401
>AJ011721-1|CAA09753.1| 717|Homo sapiens topoisomerase II beta
protein.
Length = 717
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = -2
Query: 499 GNRMSIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQAXK---NN 329
GN S P +K +DD +D ++ + S + + S+ + A K ++
Sbjct: 536 GNLFSFPSYSQK---SEDDSAKFDSNEEDSASVFSPSFGLKQTDKVPSKTVAAKKGKPSS 592
Query: 328 QTQSQPKKSQRSTEAFPALSATAHSPAAPPQWITVSKGKDK 206
T +PK++ + + A+++ + S P+ T KGK +
Sbjct: 593 DTVPKPKRAPKQKKVVEAVNSDSDSEFGIPKKTTTPKGKGR 633
>AF087160-1|AAC77432.1| 1598|Homo sapiens DNA topoisomerase II beta
protein.
Length = 1598
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = -2
Query: 499 GNRMSIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQAXK---NN 329
GN S P +K +DD +D ++ + S + + S+ + A K ++
Sbjct: 1417 GNLFSFPSYSQK---SEDDSAKFDSNEEDSASVFSPSFGLKQTDKVPSKTVAAKKGKPSS 1473
Query: 328 QTQSQPKKSQRSTEAFPALSATAHSPAAPPQWITVSKGKDK 206
T +PK++ + + A+++ + S P+ T KGK +
Sbjct: 1474 DTVPKPKRAPKQKKVVEAVNSDSDSEFGIPKKTTTPKGKGR 1514
>AB208879-1|BAD92116.1| 1009|Homo sapiens DNA topoisomerase II, beta
isozyme variant protein.
Length = 1009
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = -2
Query: 499 GNRMSIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQAXK---NN 329
GN S P +K +DD +D ++ + S + + S+ + A K ++
Sbjct: 828 GNLFSFPSYSQK---SEDDSAKFDSNEEDSASVFSPSFGLKQTDKVPSKTVAAKKGKPSS 884
Query: 328 QTQSQPKKSQRSTEAFPALSATAHSPAAPPQWITVSKGKDK 206
T +PK++ + + A+++ + S P+ T KGK +
Sbjct: 885 DTVPKPKRAPKQKKVVEAVNSDSDSEFGIPKKTTTPKGKGR 925
>X64228-1|CAA45535.1| 2090|Homo sapiens putative oncogene protein.
Length = 2090
Score = 30.7 bits (66), Expect = 6.5
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Frame = -2
Query: 505 PSGNRMSIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMIN---SQEMQAXK 335
PS S KPTL+ PS+S PNI S PP + + S++ A
Sbjct: 541 PSAASFSFGSSGFKPTLESTPVPSVSA-----PNIAMKSSFPPSTSAVKVNLSEKFTAAA 595
Query: 334 N----NQTQSQPKKSQRSTEAFPALSATAHSP---AAPP 239
+ +QS P S S+ + PA S P +APP
Sbjct: 596 TSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPP 634
>U80737-1|AAB91436.1| 326|Homo sapiens CAGH16 protein.
Length = 326
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = -2
Query: 502 SGNRMSIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQAXKNNQT 323
+G + P + + F + MG + + + +V M+ Q+ Q + Q
Sbjct: 98 AGGAAVMRPMMQPQVSSQEGFLNAQMGAQRRRELLSHHFRQQRVAMMMQQQQQQQQQQQQ 157
Query: 322 QSQPKKSQRSTEAFPALSATAHSP----AAPPQWITVSK 218
Q Q ++ Q+ + SP APP W+ +
Sbjct: 158 QQQQQQQQQQQQQQQQEQPQVFSPPPNVTAPPAWMAXGR 196
>BC045620-1|AAH45620.2| 2090|Homo sapiens nucleoporin 214kDa
protein.
Length = 2090
Score = 30.7 bits (66), Expect = 6.5
Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Frame = -2
Query: 505 PSGNRMSIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMIN---SQEMQAXK 335
PS S KPTL+ PS+S PNI S PP + + S++ A
Sbjct: 541 PSAASFSFGSSGFKPTLESTPVPSVSA-----PNIAMKSSFPPSTSAVKVNLSEKFTAAA 595
Query: 334 N----NQTQSQPKKSQRSTEAFPALSATAHSP---AAPP 239
+ +QS P S S+ + PA S P +APP
Sbjct: 596 TSTPVSSSQSAPPMSPFSSASKPAASGPLSHPTPLSAPP 634
>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin
remodeling complex subunit OSA2 protein.
Length = 2165
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -2
Query: 481 PPQQKKPTLDDDDFPSLSM---GRDDHPNIGASSVQPPKVTM 365
PP KP +DD P + GR +HP +GA Q P V +
Sbjct: 105 PPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAV 146
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,748,946
Number of Sequences: 237096
Number of extensions: 1748490
Number of successful extensions: 10662
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10451
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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