Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_O16
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 34 0.15
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 34 0.15
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 33 0.26
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL117207-22|CAO82073.1| 505|Caenorhabditis elegans Hypothetical... 30 1.8
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.2
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 29 4.2
U41108-2|AAQ23121.2| 639|Caenorhabditis elegans Tropomodulin pr... 29 4.2
L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protei... 29 4.2
L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protei... 29 4.2
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 29 4.2
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 28 9.8
Z70266-1|CAB61045.1| 364|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 9.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 9.8
AF083646-1|AAC32857.1| 364|Caenorhabditis elegans putative pota... 28 9.8
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +1
Query: 262 AMRAESLALGGTRTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQQSSXRAPPH 441
A A A G +R+ K P+E P+E TV+GA P T D +S AP
Sbjct: 1413 AKAANGSAQGSSRSTPKPKEEPKEEPMEKEDATETVNGATSEPAT----DAESEQNAPVD 1468
Query: 442 PALDS 456
+D+
Sbjct: 1469 EPMDT 1473
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 33.9 bits (74), Expect = 0.15
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +1
Query: 262 AMRAESLALGGTRTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQQSSXRAPPH 441
A A A G +R+ K P+E P+E TV+GA P T D +S AP
Sbjct: 1413 AKAANGSAQGSSRSTPKPKEEPKEEPMEKEDATETVNGATSEPAT----DAESEQNAPVD 1468
Query: 442 PALDS 456
+D+
Sbjct: 1469 EPMDT 1473
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 33.1 bits (72), Expect = 0.26
Identities = 26/94 (27%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
Frame = +1
Query: 112 EEKDRGPSPPPISHRRLHLEKGARSTCPAERLPTKPHRAPPHRLHETYGTAMRAESLALG 291
+E R +P P S RL + S P +L P PP +L GT+ E
Sbjct: 177 KEALRSSAPAPTSSARLSPITVSTSGSPRAQLAISPQEKPPQKLSINLGTSPMIEEFCEQ 236
Query: 292 GTRTDVKTG--FHPRENPVEPRLGRHTVSGAQEP 387
+ T T P +P EPR R+ ++ P
Sbjct: 237 NSATLPNTDQQLSPTLSPNEPRF-RNLITSEPTP 269
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 518 EPKRDPIPFRAPQPHEAP*PSHRTQPWP 601
+PK +P P P P P P H+ +P+P
Sbjct: 97 KPKSEPFPNPMPFPKPKPMPKHKPKPFP 124
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 521 PKRDPIPFRAPQPHEAP*PSHRTQPWP 601
PK P PF P P P H+ +P+P
Sbjct: 52 PKHKPKPFPKPMLFPKPMPKHKPKPFP 78
>AL117207-22|CAO82073.1| 505|Caenorhabditis elegans Hypothetical
protein Y60A3A.27 protein.
Length = 505
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -2
Query: 148 KLGEVKDLGPSLLPFFLSGGAGVRHN 71
+LG KD G LLPFFL G A R++
Sbjct: 56 RLGIPKDTGTRLLPFFLDGVAKTRYD 81
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -2
Query: 148 KLGEVKDLGPSLLPFFLSGGAGVRHN 71
+LG KD G LLPFFL G A R++
Sbjct: 444 RLGIPKDTGTRLLPFFLDGVAKTRYD 469
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/109 (23%), Positives = 45/109 (41%)
Frame = +1
Query: 118 KDRGPSPPPISHRRLHLEKGARSTCPAERLPTKPHRAPPHRLHETYGTAMRAESLALGGT 297
K R SPP + RR ++S PA + ++PP R + + A
Sbjct: 335 KSRSKSPPAPA-RRRRSPSASKSPPPAPKRAKSRSKSPPARRRRSPSASKSPP--APRRR 391
Query: 298 RTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQQSSXRAPPHP 444
R+ K+ + + P R + S ++ PP +P +S ++PP P
Sbjct: 392 RSPSKSRSPAPKREIPPARRRRSPSASKSPP---APKRAKSRSKSPPAP 437
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 458 PTRAERRPLARAVHPAFCAEEPKRDPIPFRAPQPHEAP*PSHRTQPW 598
PT+ E P R EP+ +P P P+PH P P +P+
Sbjct: 103 PTQPEPEPEPRPEPQPEPQPEPQPEPQPEPQPEPHPEPAPEPIVKPY 149
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.2
Identities = 28/109 (25%), Positives = 35/109 (32%), Gaps = 6/109 (5%)
Frame = +1
Query: 130 PSPPPISHRRLHLEKGARSTCPAERLPT-KPHRAPPHRLHETYGTAMRA-----ESLALG 291
P PPP R+ + P PT +P R P + E + G
Sbjct: 329 PPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRG 388
Query: 292 GTRTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQQSSXRAPP 438
G R + RE P PR T S P T PP +PP
Sbjct: 389 GPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPP 437
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.2
Identities = 28/109 (25%), Positives = 35/109 (32%), Gaps = 6/109 (5%)
Frame = +1
Query: 130 PSPPPISHRRLHLEKGARSTCPAERLPT-KPHRAPPHRLHETYGTAMRA-----ESLALG 291
P PPP R+ + P PT +P R P + E + G
Sbjct: 350 PPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRG 409
Query: 292 GTRTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQQSSXRAPP 438
G R + RE P PR T S P T PP +PP
Sbjct: 410 GPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPP 458
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.2
Identities = 28/109 (25%), Positives = 35/109 (32%), Gaps = 6/109 (5%)
Frame = +1
Query: 130 PSPPPISHRRLHLEKGARSTCPAERLPT-KPHRAPPHRLHETYGTAMRA-----ESLALG 291
P PPP R+ + P PT +P R P + E + G
Sbjct: 335 PPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRG 394
Query: 292 GTRTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQQSSXRAPP 438
G R + RE P PR T S P T PP +PP
Sbjct: 395 GPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPP 443
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 29.1 bits (62), Expect = 4.2
Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 1/112 (0%)
Frame = +1
Query: 112 EEKDRGPSPPP-ISHRRLHLEKGARSTCPAERLPTKPHRAPPHRLHETYGTAMRAESLAL 288
+E P+P P + ++ +E ++ P + PT APP R R +
Sbjct: 204 QEAAETPAPEPLVPEKKPKIEDAPTTSSPKKSTPTS---APPTRASARVSKPNRLYADGS 260
Query: 289 GGTRTDVKTGFHPRENPVEPRLGRHTVSGAQEPPCTASPPDQQSSXRAPPHP 444
T +T +NPV+ + + + P A ++ RAPP P
Sbjct: 261 FNTEILGRTRI-TEQNPVKEAQAKESTPELADLPLPAGRRKSTAAPRAPPAP 311
>U41108-2|AAQ23121.2| 639|Caenorhabditis elegans Tropomodulin
protein 2, isoform b protein.
Length = 639
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 464 RAERRPLARAVHPAFCAEEPKRDPIPFRAPQPHEAP*PSHRTQPWPP 604
R +RR A+ AEE ++P+P AP+P + P P PP
Sbjct: 244 RVKRREAAQKARLE--AEELAKNPVPKLAPEPKKEPEPKKMAPKIPP 288
>L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protein
1.2, isoform b protein.
Length = 381
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 346 PRLGRHTVSGAQE--PPCTASPPDQQSSXRAPPHPALDSP 459
P RHT+S Q+ PP SPP Q PP P + P
Sbjct: 331 PADSRHTMSSTQQISPPDEPSPPVSQILLPPPPPPPILPP 370
>L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protein
1.2, isoform a protein.
Length = 555
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 346 PRLGRHTVSGAQE--PPCTASPPDQQSSXRAPPHPALDSP 459
P RHT+S Q+ PP SPP Q PP P + P
Sbjct: 505 PADSRHTMSSTQQISPPDEPSPPVSQILLPPPPPPPILPP 544
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +2
Query: 431 RPRTRHSIVPTRAERRPLARAVHPAFCAEEPKRDPIPFRAPQPHEAP*PSHRTQP 595
RP + +I P + A + + P+R P P P P P P H QP
Sbjct: 268 RPTSAPTIPPQPSANSTRAPDIGKTLSTQPPRRTPQPHPKPPPPPPP-PIHEAQP 321
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 470 ERRPLARAVHPAFCAEEPKRDPIPFRAPQPHEAP*PSHRTQP 595
++R +AR A +P+P AP+P AP P+ +P
Sbjct: 88 KKRRVARDYAEGGAAPTAPAEPVPAPAPEPEAAPAPAPVAEP 129
>Z70266-1|CAB61045.1| 364|Caenorhabditis elegans Hypothetical
protein C40C9.1 protein.
Length = 364
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = +2
Query: 404 HRTNSRVPGRPRTRHSIVP-----TRAERRPLARAVHPAFC 511
H T +PGRPR +SIVP RR R++ C
Sbjct: 293 HSTVGVLPGRPRRMYSIVPNSTADVHLRRRSTRRSIQDTVC 333
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 9.8
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 308 LRRDFIPGKIP*NLVSGDTP*AAHRSHLAPLHH-RTNSRVPGRP-RTRHSIVPTRAERRP 481
+++ P + P NL+ GDT ++ P+ H + + RP R +V R +
Sbjct: 598 IKKILFPSQCP-NLMEGDTIVELDGRNVRPIPHTQLVDMLRERPIGYRGKLVVKRGSPKT 656
Query: 482 LARAVHPAFCAEEPKRDPIPFRAPQPHEAP*PSHR 586
+R AF EP+ + + AP P + P+ R
Sbjct: 657 RSRTPSAAFRYGEPQTNMMDSAAPLPVRSKTPAER 691
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/67 (28%), Positives = 25/67 (37%)
Frame = +2
Query: 425 PGRPRTRHSIVPTRAERRPLARAVHPAFCAEEPKRDPIPFRAPQPHEAP*PSHRTQPWPP 604
P P +H++ P + PA + + P P P PH P P H P PP
Sbjct: 98 PPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPP---PPPHYPPPPPHYPPP-PP 153
Query: 605 TNSGLYI 625
YI
Sbjct: 154 APHSAYI 160
>AF083646-1|AAC32857.1| 364|Caenorhabditis elegans putative
potassium channel subunitn2P20 protein.
Length = 364
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = +2
Query: 404 HRTNSRVPGRPRTRHSIVP-----TRAERRPLARAVHPAFC 511
H T +PGRPR +SIVP RR R++ C
Sbjct: 293 HSTVGVLPGRPRRMYSIVPNSTADVHLRRRSTRRSIQDTVC 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.134 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,583,974
Number of Sequences: 27780
Number of extensions: 416177
Number of successful extensions: 1789
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1733
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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