Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_O09
         (810 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF258571-1|AAG23774.1|  328|Homo sapiens PP3999 protein.               36   0.17 
Z98880-3|CAI42375.1| 2341|Homo sapiens v-ros UR2 sarcoma virus o...    30   8.6  
Z98880-2|CAI42374.1| 2347|Homo sapiens v-ros UR2 sarcoma virus o...    30   8.6  
M34353-1|AAA60278.1| 2347|Homo sapiens ROS1 protein.                   30   8.6  
AL132671-5|CAI23379.1| 2341|Homo sapiens v-ros UR2 sarcoma virus...    30   8.6  
AL132671-4|CAI23378.1| 2347|Homo sapiens v-ros UR2 sarcoma virus...    30   8.6  

>AF258571-1|AAG23774.1|  328|Homo sapiens PP3999 protein.
          Length = 328

 Score = 35.9 bits (79), Expect = 0.17
 Identities = 26/73 (35%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
 Frame = -2

Query: 776 RGQ--WXXHP*SFXIIWAVSPLXIXPPSPGFRVHQPDHQIPDSXHPTTP------DLTSI 621
           RGQ  W  H  S+   WA  PL    P PG R  + DH+      PT P      D    
Sbjct: 68  RGQACWHTHTSSWRRPWAPGPLQGHTPGPGQR--RGDHRCESEPDPTAPLQRPPADKAGA 125

Query: 620 SHQSPDAVXEGVR 582
           S ++P AV  G R
Sbjct: 126 SGEAPPAVLRGTR 138


>Z98880-3|CAI42375.1| 2341|Homo sapiens v-ros UR2 sarcoma virus
           oncogene homolog 1 (avian) protein.
          Length = 2341

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 746 FXIIWA-VSPLXIX-PPSPGFRVHQPDHQIPDSXHPTTPDLTSISHQSPDAV 597
           F ++W   + L +  PPSP +R H   H +P+    T P + +I   SPD V
Sbjct: 175 FRVVWIFTAQLQLYSPPSPSYRTH--PHGVPE----TAPLIRNIESSSPDTV 220


>Z98880-2|CAI42374.1| 2347|Homo sapiens v-ros UR2 sarcoma virus
           oncogene homolog 1 (avian) protein.
          Length = 2347

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 746 FXIIWA-VSPLXIX-PPSPGFRVHQPDHQIPDSXHPTTPDLTSISHQSPDAV 597
           F ++W   + L +  PPSP +R H   H +P+    T P + +I   SPD V
Sbjct: 166 FRVVWIFTAQLQLYSPPSPSYRTH--PHGVPE----TAPLIRNIESSSPDTV 211


>M34353-1|AAA60278.1| 2347|Homo sapiens ROS1 protein.
          Length = 2347

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 746 FXIIWA-VSPLXIX-PPSPGFRVHQPDHQIPDSXHPTTPDLTSISHQSPDAV 597
           F ++W   + L +  PPSP +R H   H +P+    T P + +I   SPD V
Sbjct: 166 FRVVWIFTAQLQLYSPPSPSYRTH--PHGVPE----TAPLIRNIESSSPDTV 211


>AL132671-5|CAI23379.1| 2341|Homo sapiens v-ros UR2 sarcoma virus
           oncogene homolog 1 (avian) protein.
          Length = 2341

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 746 FXIIWA-VSPLXIX-PPSPGFRVHQPDHQIPDSXHPTTPDLTSISHQSPDAV 597
           F ++W   + L +  PPSP +R H   H +P+    T P + +I   SPD V
Sbjct: 175 FRVVWIFTAQLQLYSPPSPSYRTH--PHGVPE----TAPLIRNIESSSPDTV 220


>AL132671-4|CAI23378.1| 2347|Homo sapiens v-ros UR2 sarcoma virus
           oncogene homolog 1 (avian) protein.
          Length = 2347

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 746 FXIIWA-VSPLXIX-PPSPGFRVHQPDHQIPDSXHPTTPDLTSISHQSPDAV 597
           F ++W   + L +  PPSP +R H   H +P+    T P + +I   SPD V
Sbjct: 166 FRVVWIFTAQLQLYSPPSPSYRTH--PHGVPE----TAPLIRNIESSSPDTV 211


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,464,482
Number of Sequences: 237096
Number of extensions: 2388343
Number of successful extensions: 5100
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5100
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)