Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP13_T7_O02
         (812 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p pro...   100   5e-21
AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA...   100   5e-21
X13382-1|CAA31759.1|  407|Drosophila melanogaster protein ( Dros...    99   8e-21

>AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p
           protein.
          Length = 401

 Score = 99.5 bits (237), Expect = 5e-21
 Identities = 55/127 (43%), Positives = 70/127 (55%)
 Frame = -3

Query: 624 QSAFGRLDPYSGHGRHHRNQKKNFNLPQPKMANTDLTRXFKXDEIRKVLRAPNKRVIRAT 445
           +SAF RL+   G  +     KK +NLPQPKMANTDL+R  K +EIRKVLR P KRV R+ 
Sbjct: 257 ESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSV 316

Query: 444 RKLNPLTNNKAMLKLNPYXXXXXXXXXXXXXXXXXXXXXXXAEKSGLKLXKRNPAMKAEK 265
           R+LNPLTN + ++KLNPY                       A+K  ++L K + A  A K
Sbjct: 317 RRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLAKAKKQNVELAKSHFANVATK 376

Query: 264 LRERRRK 244
               R K
Sbjct: 377 AAANRAK 383


>AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA
           protein.
          Length = 401

 Score = 99.5 bits (237), Expect = 5e-21
 Identities = 55/127 (43%), Positives = 70/127 (55%)
 Frame = -3

Query: 624 QSAFGRLDPYSGHGRHHRNQKKNFNLPQPKMANTDLTRXFKXDEIRKVLRAPNKRVIRAT 445
           +SAF RL+   G  +     KK +NLPQPKMANTDL+R  K +EIRKVLR P KRV R+ 
Sbjct: 257 ESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSV 316

Query: 444 RKLNPLTNNKAMLKLNPYXXXXXXXXXXXXXXXXXXXXXXXAEKSGLKLXKRNPAMKAEK 265
           R+LNPLTN + ++KLNPY                       A+K  ++L K + A  A K
Sbjct: 317 RRLNPLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLAKAKKQNVELAKSHFANVATK 376

Query: 264 LRERRRK 244
               R K
Sbjct: 377 AAANRAK 383


>X13382-1|CAA31759.1|  407|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. ribosomal protein
           L1. ).
          Length = 407

 Score = 98.7 bits (235), Expect = 8e-21
 Identities = 46/78 (58%), Positives = 57/78 (73%)
 Frame = -3

Query: 624 QSAFGRLDPYSGHGRHHRNQKKNFNLPQPKMANTDLTRXFKXDEIRKVLRAPNKRVIRAT 445
           +SAF RL+   G  +     KK +NLPQPKMANTDL+R  K +EIRKVLR P KRV R+ 
Sbjct: 257 ESAFARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSV 316

Query: 444 RKLNPLTNNKAMLKLNPY 391
           R+LNPLTN + ++KLNPY
Sbjct: 317 RRLNPLTNVRQLIKLNPY 334


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,818,241
Number of Sequences: 53049
Number of extensions: 366469
Number of successful extensions: 751
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)