Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_N14
(830 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 33 0.19
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 32 0.58
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 31 1.3
U58739-1|AAB00607.1| 392|Caenorhabditis elegans Hypothetical pr... 29 4.1
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 29 5.4
U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 7.1
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 7.1
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 9.4
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = -3
Query: 600 STEPIDLSXRRCSPLTLGHPPVAPEPPRKPFKLFRPYLLEDEDEKRPSIASLPVSNTGYV 421
+ +P DLS ++ P+ P P + P K ++P +D++ P A P T +
Sbjct: 953 AAKPRDLSPKKAIPIPANTQEAPPTPVKNPVKKWKPPWEDDDEPAEPVSAPEPEKKTPVL 1012
Query: 420 SAFVPVQ 400
+ P +
Sbjct: 1013 AKKAPAK 1019
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 31.9 bits (69), Expect = 0.58
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = -3
Query: 612 LVQPSTEPIDLSXRRCSPLTLGHPPVAPEPPRKPFKLFRPYLLEDEDEKRPSIAS----L 445
++ P+ P S ++ SP+ P+ P P +P + P ++ + P S L
Sbjct: 1499 VIPPAPAPTPTSQQKVSPV---KRPIPPSIPNEPLDIIPPVPSDNIPDPTPPTNSFGTVL 1555
Query: 444 PVSNTGYVSAFVPVQSAAGCALTACSAP 361
PV +T S VP QS + T P
Sbjct: 1556 PVPHTFQTSVRVPTQSLFSSSSTTTVQP 1583
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/93 (26%), Positives = 35/93 (37%)
Frame = -3
Query: 603 PSTEPIDLSXRRCSPLTLGHPPVAPEPPRKPFKLFRPYLLEDEDEKRPSIASLPVSNTGY 424
P EP + C P T + P A P P + +++ P +P+
Sbjct: 114 PVYEPYACAAPPCPPPTPVYEPYACAAPPCPAPVAPQPVIQHVPVPVPVQVPVPIRVPVP 173
Query: 423 VSAFVPVQSAAGCALTACSAPHWCAAMPSYSAP 325
V PV CA+ C AP AA P Y+ P
Sbjct: 174 VPVPTPVYQPTYCAVPPCPAP---AATPVYAQP 203
>U58739-1|AAB00607.1| 392|Caenorhabditis elegans Hypothetical
protein F28C10.3 protein.
Length = 392
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/39 (25%), Positives = 23/39 (58%)
Frame = +3
Query: 417 QKHILYSKLAMKRLMVASHLHLQVSKVGII*TACEVVQA 533
+KHI++ + ++ L++ + HL ++ G+ T C+ A
Sbjct: 145 EKHIVHRDVKLENLLIGNDGHLMITDYGLSATGCDAEDA 183
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 316 SSQRSRVRGHSCTPMRSRTRGQGATRCTLYW 408
S RSR + T RSRTR Q + TL W
Sbjct: 365 SRSRSRTPNRNWTRARSRTRSQAKSSSTLTW 395
>U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical
protein F40F4.6 protein.
Length = 2214
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = -3
Query: 489 LLEDEDEKRPSIASLPVSNTGYVSAFVPVQSAAGCALTACSAPHWCAAMPSYSAPLR*ED 310
++E E SI L S GY+S F+ V G L W AAM + +
Sbjct: 434 VIEQATESVQSIVDLLASEPGYLSKFIVVLFDNGKLLVNRQYDSWDAAMVDLTKAIHSAP 493
Query: 309 AEG 301
+EG
Sbjct: 494 SEG 496
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.1
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -3
Query: 561 PLTLGHPPVAPEPPRKPFK-LFRPYLLEDEDEKRPSIASLPVSNTGYVSAFVPVQSAAGC 385
PL L +PP P PP P K RP + RP AS PV Y Q
Sbjct: 79 PLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP-ASEPVGIPLYSEKQHQQQLRPTT 137
Query: 384 ALTACSAPHWCAAMPSYSA 328
A++ P + +P +A
Sbjct: 138 AVSPPKPPSFAPPVPPAAA 156
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 7.1
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -3
Query: 561 PLTLGHPPVAPEPPRKPFK-LFRPYLLEDEDEKRPSIASLPVSNTGYVSAFVPVQSAAGC 385
PL L +PP P PP P K RP + RP AS PV Y Q
Sbjct: 301 PLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP-ASEPVGIPLYSEKQHQQQLRPTT 359
Query: 384 ALTACSAPHWCAAMPSYSA 328
A++ P + +P +A
Sbjct: 360 AVSPPKPPSFAPPVPPAAA 378
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 615 ALVQPSTEPIDLSXRRCSPLTLGHPPVAPEPPRKPFKLFRP 493
A +PST I ++ + + G P A + PRKP + RP
Sbjct: 317 AATRPSTSAIRVTPIAPNVVRNGAPTTAQQAPRKPIGIARP 357
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,647,527
Number of Sequences: 27780
Number of extensions: 331522
Number of successful extensions: 912
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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