Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_N10
(763 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024990-1|ABE01220.1| 347|Drosophila melanogaster IP11205p pro... 33 0.43
AE014298-2829|AAN09486.1| 347|Drosophila melanogaster CG32537-P... 33 0.43
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 32 0.74
AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy... 31 2.3
AY069040-1|AAL39185.1| 429|Drosophila melanogaster GH03623p pro... 30 4.0
AE014296-2717|AAF49476.1| 429|Drosophila melanogaster CG4784-PA... 30 4.0
AE014134-138|AAF51469.2| 826|Drosophila melanogaster CG2839-PA ... 30 4.0
AE014297-109|AAF52120.1| 701|Drosophila melanogaster CG1078-PA ... 29 5.2
AY118636-1|AAM50005.1| 1238|Drosophila melanogaster SD02122p pro... 29 6.9
AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein... 29 6.9
AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subu... 29 6.9
AE014297-3454|AAF56231.1| 1238|Drosophila melanogaster CG6057-PA... 29 6.9
AF160911-1|AAD46851.1| 1028|Drosophila melanogaster BcDNA.LD0556... 29 9.2
AE014296-1819|AAF50157.1| 1028|Drosophila melanogaster CG6539-PA... 29 9.2
>BT024990-1|ABE01220.1| 347|Drosophila melanogaster IP11205p
protein.
Length = 347
Score = 33.1 bits (72), Expect = 0.43
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = -2
Query: 411 DTDVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKE-FERAMKEAQRRD-QGIVN 238
+TD EAA ++ S + S +G + + N + ++ VKE F+RA + + +G+V
Sbjct: 80 ETDAEAAAVDDVDSLSAE-TSHEGYSGEDNYERNYEQFVKEYFDRAADDDDHDEGEGLVE 138
Query: 237 DEGSNEIEELTDVKDLRSNKKKGK 166
+E E T+V+D R + K K
Sbjct: 139 EEEEETQAEATNVRDQRCRQVKRK 162
>AE014298-2829|AAN09486.1| 347|Drosophila melanogaster CG32537-PA
protein.
Length = 347
Score = 33.1 bits (72), Expect = 0.43
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = -2
Query: 411 DTDVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKE-FERAMKEAQRRD-QGIVN 238
+TD EAA ++ S + S +G + + N + ++ VKE F+RA + + +G+V
Sbjct: 80 ETDAEAAAVDDVDSLSAE-TSHEGYSGEDNYERNYEQFVKEYFDRAADDDDHDEGEGLVE 138
Query: 237 DEGSNEIEELTDVKDLRSNKKKGK 166
+E E T+V+D R + K K
Sbjct: 139 EEEEETQAEATNVRDQRCRQVKRK 162
>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
EAST protein.
Length = 2362
Score = 32.3 bits (70), Expect = 0.74
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -2
Query: 240 NDEGSNEIEEL--TDVKDLRSNKKKGK*RETNKEK 142
+D NE+E L TD KD + K KG RETN+E+
Sbjct: 257 HDADGNEMESLPITDKKDHKDTKDKGDERETNQEE 291
>AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy
chain protein.
Length = 4559
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = -2
Query: 360 KIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTDVKDLRSN 181
++V V+ P+L+A T+ Q+Q F+ +K + ++ G N +E++T V +L
Sbjct: 3661 EVVKVERPDLEAMRTRLTQQQ-NHFKITLKFLEDDLLARLSSAGDNVLEDVTLVMNLEKT 3719
Query: 180 KK 175
KK
Sbjct: 3720 KK 3721
>AY069040-1|AAL39185.1| 429|Drosophila melanogaster GH03623p
protein.
Length = 429
Score = 29.9 bits (64), Expect = 4.0
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = -2
Query: 306 QEQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTDVKDLRSNKKKGK*RETNKEKGW*DQ 127
Q+Q KE + +++ QR+DQ + E +D R ++++ + RE +E+ DQ
Sbjct: 207 QDQRKELRQDLRQEQRQDQREDRRQDQREDRRQNQREDRRQDQREER-REDQREERGEDQ 265
Query: 126 SRFCREGKLGA*EXRRKIRMHQL 58
RE + E RR+ R L
Sbjct: 266 REERREDRR---EDRREDRRQDL 285
>AE014296-2717|AAF49476.1| 429|Drosophila melanogaster CG4784-PA
protein.
Length = 429
Score = 29.9 bits (64), Expect = 4.0
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = -2
Query: 306 QEQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTDVKDLRSNKKKGK*RETNKEKGW*DQ 127
Q+Q KE + +++ QR+DQ + E +D R ++++ + RE +E+ DQ
Sbjct: 207 QDQRKELRQDLRQEQRQDQREDRRQDQREDRRQNQREDRRQDQREER-REDQREERGEDQ 265
Query: 126 SRFCREGKLGA*EXRRKIRMHQL 58
RE + E RR+ R L
Sbjct: 266 REERREDRR---EDRREDRRQDL 285
>AE014134-138|AAF51469.2| 826|Drosophila melanogaster CG2839-PA
protein.
Length = 826
Score = 29.9 bits (64), Expect = 4.0
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = -2
Query: 303 EQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTDVKDLRSNKKKGK*RETNKEKGW*DQS 124
E+ + E KE +RR++ +EG + EE + K+ R ++K K E +EK D+
Sbjct: 503 EERRREEEKRKEEERREKERRREEGKRKEEERRE-KERRREEEKRK-EEERREKERRDEE 560
Query: 123 RFCREGKLGA*EXRRK 76
R E + E RR+
Sbjct: 561 RRREEERRREEERRRE 576
>AE014297-109|AAF52120.1| 701|Drosophila melanogaster CG1078-PA
protein.
Length = 701
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -2
Query: 309 LQEQVKEFERAMKEAQR-RDQGIVNDEGSNEIEELTDVKDLRSNKKKGK*RETNKEK 142
L ++ K ER +KE +R RD+ D+ ++ +E KD K K K ++ +KEK
Sbjct: 582 LLKEEKRKERDLKERERHRDKERSRDKDKDKDKEKDKDKDKDKEKDKEKDKDKDKEK 638
>AY118636-1|AAM50005.1| 1238|Drosophila melanogaster SD02122p
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 6.9
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = -2
Query: 315 KALQEQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTDVKDLRSNKKKGK*RETNKEK 142
K+ Q ++E R +K+ RRD G ++ + + EL DV+D + K K + ++K
Sbjct: 466 KSSQAALEEQNR-IKDELRRDVGTSKEKIAEKQRELEDVRDQLGDAKSDKHEDARRKK 522
>AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 6.9
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = -2
Query: 315 KALQEQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTDVKDLRSNKKKGK*RETNKEK 142
K+ Q ++E R +K+ RRD G ++ + + EL DV+D + K K + ++K
Sbjct: 466 KSSQAALEEQNR-IKDELRRDVGTSKEKIAEKQRELEDVRDQLGDAKSDKHEDARRKK 522
>AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subunit
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 6.9
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = -2
Query: 315 KALQEQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTDVKDLRSNKKKGK*RETNKEK 142
K+ Q ++E R +K+ RRD G ++ + + EL DV+D + K K + ++K
Sbjct: 466 KSSQAALEEQNR-IKDELRRDVGTSKEKIAEKQRELEDVRDQLGDAKSDKHEDARRKK 522
>AE014297-3454|AAF56231.1| 1238|Drosophila melanogaster CG6057-PA
protein.
Length = 1238
Score = 29.1 bits (62), Expect = 6.9
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = -2
Query: 315 KALQEQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTDVKDLRSNKKKGK*RETNKEK 142
K+ Q ++E R +K+ RRD G ++ + + EL DV+D + K K + ++K
Sbjct: 466 KSSQAALEEQNR-IKDELRRDVGTSKEKIAEKQRELEDVRDQLGDAKSDKHEDARRKK 522
>AF160911-1|AAD46851.1| 1028|Drosophila melanogaster BcDNA.LD05563
protein.
Length = 1028
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 306 QEQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTDVKDLRS 184
+E+ K F+ AMKE+ + + E S EE + KDL++
Sbjct: 812 KERKKHFKEAMKESLKSIDNYESQESSESEEEEEEEKDLKN 852
>AE014296-1819|AAF50157.1| 1028|Drosophila melanogaster CG6539-PA
protein.
Length = 1028
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 306 QEQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTDVKDLRS 184
+E+ K F+ AMKE+ + + E S EE + KDL++
Sbjct: 812 KERKKHFKEAMKESLKSIDNYESQESSESEEEEEEEKDLKN 852
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,104,897
Number of Sequences: 53049
Number of extensions: 167712
Number of successful extensions: 855
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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