Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP13_T7_N10
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 34 0.13
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 32 0.39
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 31 0.89
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 31 0.89
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 31 0.89
M37234-1|AAA28120.1| 272|Caenorhabditis elegans myosin I protein. 31 0.89
U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF016676-1|AAG24103.1| 598|Caenorhabditis elegans Hypothetical ... 30 2.1
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 29 2.7
Z69793-3|CAA93672.2| 709|Caenorhabditis elegans Hypothetical pr... 29 3.6
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 3.6
AL021572-1|CAA16516.2| 654|Caenorhabditis elegans Hypothetical ... 28 6.3
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 28 6.3
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 28 6.3
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Frame = -2
Query: 381 EDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQ-----RRDQGIVNDEGSNEI 217
E+++E++KI+ K L+A ++K + V+ +++ + R++ I++DE S
Sbjct: 93 EEANERIKILDEKLDKLEAKISKTEESLVQSVSMLLEKDEQLKTIRKEMKIMDDERSAFD 152
Query: 216 EELTDVKDLRSNKKK 172
+ELT +K R +K
Sbjct: 153 QELTRLKTSRLENEK 167
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 32.3 bits (70), Expect = 0.39
Identities = 19/75 (25%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Frame = -2
Query: 381 EDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQ-----RRDQGIVNDEGSNEI 217
E+++E++KI+ + L+A ++K + V+ +++ + R++ I++DE S
Sbjct: 93 EEANERIKILDEELDKLEAKISKTEESLVQSVSMLLEKDEQLKTIRKEMKIMDDERSAFD 152
Query: 216 EELTDVKDLRSNKKK 172
+ELT +K R +K
Sbjct: 153 QELTRLKTSRLENEK 167
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 31.1 bits (67), Expect = 0.89
Identities = 23/77 (29%), Positives = 39/77 (50%)
Frame = -2
Query: 405 DVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGIVNDEGS 226
+ EAA E+S KV + ++ + + + K +QE+ +EFE K QR + I + S
Sbjct: 1553 EAEAALEAEES--KVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRALESI---QAS 1607
Query: 225 NEIEELTDVKDLRSNKK 175
E E + + R+ KK
Sbjct: 1608 LETEAKSKAELARAKKK 1624
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 31.1 bits (67), Expect = 0.89
Identities = 23/77 (29%), Positives = 39/77 (50%)
Frame = -2
Query: 405 DVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGIVNDEGS 226
+ EAA E+S KV + ++ + + + K +QE+ +EFE K QR + I + S
Sbjct: 1553 EAEAALEAEES--KVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRALESI---QAS 1607
Query: 225 NEIEELTDVKDLRSNKK 175
E E + + R+ KK
Sbjct: 1608 LETEAKSKAELARAKKK 1624
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 31.1 bits (67), Expect = 0.89
Identities = 23/77 (29%), Positives = 39/77 (50%)
Frame = -2
Query: 405 DVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGIVNDEGS 226
+ EAA E+S KV + ++ + + + K +QE+ +EFE K QR + I + S
Sbjct: 1553 EAEAALEAEES--KVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRALESI---QAS 1607
Query: 225 NEIEELTDVKDLRSNKK 175
E E + + R+ KK
Sbjct: 1608 LETEAKSKAELARAKKK 1624
>M37234-1|AAA28120.1| 272|Caenorhabditis elegans myosin I protein.
Length = 272
Score = 31.1 bits (67), Expect = 0.89
Identities = 23/77 (29%), Positives = 39/77 (50%)
Frame = -2
Query: 405 DVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGIVNDEGS 226
+ EAA E+S KV + ++ + + + K +QE+ +EFE K QR + I + S
Sbjct: 62 EAEAALEAEES--KVLRLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRALESI---QAS 116
Query: 225 NEIEELTDVKDLRSNKK 175
E E + + R+ KK
Sbjct: 117 LETEAKSKAELARAKKK 133
>U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical
protein T22B7.4 protein.
Length = 537
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = -2
Query: 378 DSSEKVKIVSVKGPNLDANV------TKALQEQVKEFERAM-KEAQRRDQGIVND-EGSN 223
+S EK VS + LDAN T L+E+ + E+ + K+ + +D V+D E SN
Sbjct: 421 NSEEKKTEVSSEDVFLDANEEFPGVSTYGLEEEQDDSEKEVCKKHRNKDDKRVDDVEDSN 480
Query: 222 EIEELTDVKDLRSNKKKGK*RE 157
++EE +RS + G RE
Sbjct: 481 DLEENASSAPMRSTSECGDERE 502
>AF016676-1|AAG24103.1| 598|Caenorhabditis elegans Hypothetical
protein F41B5.6 protein.
Length = 598
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = -2
Query: 333 LDANVTKALQEQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTDVKDLRSNKKKGK*RET 154
L+A + A ++ K+ +A + + G+ + + N + +T+V D+ + + R T
Sbjct: 5 LNAQLNIARKKIQKQINQAKQLVNEFNNGLNSTDNENIYDTITEVADVATEIQSEMNRIT 64
Query: 153 NKEKGW*DQSRF 118
K W +QS+F
Sbjct: 65 QYMKQWNNQSKF 76
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -2
Query: 411 DTDVEAARPNEDSSEKV--KIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGIVN 238
D + + A E+ EK ++ K + TK +++++E R + +++ +
Sbjct: 90 DKEEKEAEKEEEKEEKPPKEVTEEKEKEKEREKTKT-KDELEEAPREKETMEKKQKSKDE 148
Query: 237 DEGSNEIEELTDVKDLRSNKKKGK*RETNK 148
DEG EE+ +K +KK + RE K
Sbjct: 149 DEGDLSKEEILKIKKALKKEKKLRDRERLK 178
>Z69793-3|CAA93672.2| 709|Caenorhabditis elegans Hypothetical
protein R03A10.3 protein.
Length = 709
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 408 TDVEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGIVN-DE 232
T + A +DS+ ++ S G + + ++ ++EFERA +E GI +
Sbjct: 214 TGIGALLVRKDSAHLIEKTSFAGGTVQSVDEMSMFFVLREFERAFEEGTLNYYGIAQLQK 273
Query: 231 GSNEIEELTDVKDLRS 184
G EIE + +R+
Sbjct: 274 GFEEIERCGGISSIRN 289
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = -2
Query: 402 VEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAM--KEAQRRDQGIVNDEG 229
VE +SS+K+ K ++ + TKA +E ++ E+A+ ++A RR+Q +ND
Sbjct: 3225 VEQLTKLAESSDKIDPQVAK--DIKDSKTKA-KELLQALEKAIPQEDAIRREQAEINDRL 3281
Query: 228 SNEIEELTDVKDLR 187
+N +ELT V + +
Sbjct: 3282 NNLEKELTKVDEFK 3295
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = -2
Query: 402 VEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAM--KEAQRRDQGIVNDEG 229
VE +SS+K+ K ++ + TKA +E ++ E+A+ ++A RR+Q +ND
Sbjct: 4128 VEQLTKLAESSDKIDPQVAK--DIKDSKTKA-KELLQALEKAIPQEDAIRREQAEINDRL 4184
Query: 228 SNEIEELTDVKDLR 187
+N +ELT V + +
Sbjct: 4185 NNLEKELTKVDEFK 4198
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = -2
Query: 402 VEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAM--KEAQRRDQGIVNDEG 229
VE +SS+K+ K ++ + TKA +E ++ E+A+ ++A RR+Q +ND
Sbjct: 5082 VEQLTKLAESSDKIDPQVAK--DIKDSKTKA-KELLQALEKAIPQEDAIRREQAEINDRL 5138
Query: 228 SNEIEELTDVKDLR 187
+N +ELT V + +
Sbjct: 5139 NNLEKELTKVDEFK 5152
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = -2
Query: 402 VEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAM--KEAQRRDQGIVNDEG 229
VE +SS+K+ K ++ + TKA +E ++ E+A+ ++A RR+Q +ND
Sbjct: 5985 VEQLTKLAESSDKIDPQVAK--DIKDSKTKA-KELLQALEKAIPQEDAIRREQAEINDRL 6041
Query: 228 SNEIEELTDVKDLR 187
+N +ELT V + +
Sbjct: 6042 NNLEKELTKVDEFK 6055
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = -2
Query: 402 VEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAM--KEAQRRDQGIVNDEG 229
VE +SS+K+ K ++ + TKA +E ++ E+A+ ++A RR+Q +ND
Sbjct: 6888 VEQLTKLAESSDKIDPQVAK--DIKDSKTKA-KELLQALEKAIPQEDAIRREQAEINDRL 6944
Query: 228 SNEIEELTDVKDLR 187
+N +ELT V + +
Sbjct: 6945 NNLEKELTKVDEFK 6958
>AL021572-1|CAA16516.2| 654|Caenorhabditis elegans Hypothetical
protein W06H3.1 protein.
Length = 654
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/64 (21%), Positives = 31/64 (48%)
Frame = -2
Query: 402 VEAARPNEDSSEKVKIVSVKGPNLDANVTKALQEQVKEFERAMKEAQRRDQGIVNDEGSN 223
+E R ++ + I LDA + +A E K+++ +KE R + + + E +
Sbjct: 356 LEKLRLETNAKQAAVIPEFDKKKLDAELARATAEIQKKYDEKLKEVVRTQKQLYDIEHAK 415
Query: 222 EIEE 211
+++E
Sbjct: 416 DVDE 419
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -2
Query: 360 KIVSVKGPNLDANVTKA----LQEQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTDVKD 193
KI+ + P D N +A +QE+ E E+ K + R VNDE ++ + VK+
Sbjct: 356 KILDEENPGDDENQEEAWEAKMQEREVEMEKKRKILEERVNSAVNDEETHRL-----VKE 410
Query: 192 LRSNKKKGK*RETNKEK 142
+ N+ + K + EK
Sbjct: 411 MMENEAELKKARSEHEK 427
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -2
Query: 360 KIVSVKGPNLDANVTKA----LQEQVKEFERAMKEAQRRDQGIVNDEGSNEIEELTDVKD 193
KI+ + P D N +A +QE+ E E+ K + R VNDE ++ + VK+
Sbjct: 358 KILDEENPGDDENQEEAWEAKMQEREVEMEKKRKILEERVNSAVNDEETHRL-----VKE 412
Query: 192 LRSNKKKGK*RETNKEK 142
+ N+ + K + EK
Sbjct: 413 MMENEAELKKARSEHEK 429
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,249,331
Number of Sequences: 27780
Number of extensions: 87092
Number of successful extensions: 520
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -